RNA–Protein interactions for RNA: ENST00000523870.1

AP003472.1-202, humanhuman

TSL 2

Gene AP003472.1, Length 492 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003472.1-202ENST00000523870 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
AP003472.1-202ENST00000523870 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
AP003472.1-202ENST00000523870 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
AP003472.1-202ENST00000523870 CCDC180Q9P1Z9 1646 aa14.21□□□□□ -0.13
AP003472.1-202ENST00000523870 PHF23Q9BUL5 403 aaPredicted RBP13.88□□□□□ -0.19
AP003472.1-202ENST00000523870 ABCC9O60706 1549 aa13.76□□□□□ -0.21
AP003472.1-202ENST00000523870 SENP3Q9H4L4 574 aaPredicted RBP13.72□□□□□ -0.21
AP003472.1-202ENST00000523870 MYO15BQ96JP2 1530 aa13.33□□□□□ -0.28
AP003472.1-202ENST00000523870 NACADO15069 1562 aa13.32□□□□□ -0.28
AP003472.1-202ENST00000523870 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
AP003472.1-202ENST00000523870 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
AP003472.1-202ENST00000523870 DCAF1Q9Y4B6 1507 aa13.25□□□□□ -0.29
AP003472.1-202ENST00000523870 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
AP003472.1-202ENST00000523870 UNC13AQ9UPW8 1703 aa13.04□□□□□ -0.32
AP003472.1-202ENST00000523870 BICRAQ9NZM4 1560 aa12.95□□□□□ -0.34
AP003472.1-202ENST00000523870 PLPPR3Q6T4P5 718 aa12.88□□□□□ -0.35
AP003472.1-202ENST00000523870 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
AP003472.1-202ENST00000523870 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
AP003472.1-202ENST00000523870 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
AP003472.1-202ENST00000523870 FOXD1Q16676 465 aa12.72□□□□□ -0.37
AP003472.1-202ENST00000523870 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
AP003472.1-202ENST00000523870 EIF4G1Q04637 1599 aaKnown RBP12.58□□□□□ -0.4
AP003472.1-202ENST00000523870 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
AP003472.1-202ENST00000523870 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.43
AP003472.1-202ENST00000523870 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
AP003472.1-202ENST00000523870 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
AP003472.1-202ENST00000523870 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
AP003472.1-202ENST00000523870 ADRA2BP18089 450 aa12.3□□□□□ -0.44
AP003472.1-202ENST00000523870 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
AP003472.1-202ENST00000523870 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
AP003472.1-202ENST00000523870 SMARCA2P51531 1590 aa12.27□□□□□ -0.44
AP003472.1-202ENST00000523870 PPP6R1Q9UPN7 881 aa12.26□□□□□ -0.45
AP003472.1-202ENST00000523870 HMGXB3Q12766 1538 aa12.26□□□□□ -0.45
AP003472.1-202ENST00000523870 MROH2BQ7Z745 1585 aa12.25□□□□□ -0.45
AP003472.1-202ENST00000523870 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
AP003472.1-202ENST00000523870 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
AP003472.1-202ENST00000523870 WIZO95785 1651 aa12.1□□□□□ -0.47
AP003472.1-202ENST00000523870 PIAS4Q8N2W9 510 aaPredicted RBP12.08□□□□□ -0.48
AP003472.1-202ENST00000523870 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
AP003472.1-202ENST00000523870 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
AP003472.1-202ENST00000523870 NESP48681 1621 aa11.93□□□□□ -0.5
AP003472.1-202ENST00000523870 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
AP003472.1-202ENST00000523870 CFTRP13569 1480 aa11.86□□□□□ -0.51
AP003472.1-202ENST00000523870 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
AP003472.1-202ENST00000523870 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
AP003472.1-202ENST00000523870 PDS5BQ9NTI5 1447 aa11.83□□□□□ -0.52
AP003472.1-202ENST00000523870 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
AP003472.1-202ENST00000523870 CUX2O14529 1486 aa11.83□□□□□ -0.52
AP003472.1-202ENST00000523870 KIF21AQ7Z4S6 1674 aa11.82□□□□□ -0.52
AP003472.1-202ENST00000523870 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
AP003472.1-202ENST00000523870 FANCD2Q9BXW9 1451 aa11.75□□□□□ -0.53
AP003472.1-202ENST00000523870 MRC2Q9UBG0 1479 aa11.74□□□□□ -0.53
AP003472.1-202ENST00000523870 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
AP003472.1-202ENST00000523870 WDR62O43379 1518 aa11.74□□□□□ -0.53
AP003472.1-202ENST00000523870 MSH5O43196 834 aa11.73□□□□□ -0.53
AP003472.1-202ENST00000523870 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
AP003472.1-202ENST00000523870 SUPT5HO00267 1087 aaKnown RBP11.61□□□□□ -0.55
AP003472.1-202ENST00000523870 ABCC8Q09428 1581 aa11.59□□□□□ -0.55
AP003472.1-202ENST00000523870 DNMBPQ6XZF7 1577 aa11.58□□□□□ -0.55
AP003472.1-202ENST00000523870 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
AP003472.1-202ENST00000523870 IFT140Q96RY7 1462 aa11.51□□□□□ -0.57
AP003472.1-202ENST00000523870 CUX1P39880 1505 aa11.5□□□□□ -0.57
AP003472.1-202ENST00000523870 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
AP003472.1-202ENST00000523870 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
AP003472.1-202ENST00000523870 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
AP003472.1-202ENST00000523870 ZNF608Q9ULD9 1512 aaPredicted RBP11.44□□□□□ -0.58
AP003472.1-202ENST00000523870 FGD5Q6ZNL6 1462 aa11.44□□□□□ -0.58
AP003472.1-202ENST00000523870 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
AP003472.1-202ENST00000523870 EIF4G3O43432 1585 aaKnown RBP11.42□□□□□ -0.58
AP003472.1-202ENST00000523870 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
AP003472.1-202ENST00000523870 SYNJ1O43426 1573 aa11.39□□□□□ -0.59
AP003472.1-202ENST00000523870 WRNQ14191 1432 aaPredicted RBP eCLIP11.39□□□□□ -0.59
AP003472.1-202ENST00000523870 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
AP003472.1-202ENST00000523870 RAD54L2Q9Y4B4 1467 aa11.38□□□□□ -0.59
AP003472.1-202ENST00000523870 SOGA1O94964 1423 aa11.38□□□□□ -0.59
AP003472.1-202ENST00000523870 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
AP003472.1-202ENST00000523870 PPP4R3CPQ6ZMV5 832 aa11.36□□□□□ -0.59
AP003472.1-202ENST00000523870 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
AP003472.1-202ENST00000523870 AQRO60306 1485 aaKnown RBP eCLIP11.33□□□□□ -0.6
AP003472.1-202ENST00000523870 TDRD9Q8NDG6 1382 aaKnown RBP11.29□□□□□ -0.6
AP003472.1-202ENST00000523870 GRIN2BQ13224 1484 aa11.29□□□□□ -0.6
AP003472.1-202ENST00000523870 MAGI1Q96QZ7 1491 aaPredicted RBP11.29□□□□□ -0.6
AP003472.1-202ENST00000523870 PBRM1Q86U86 1689 aa11.29□□□□□ -0.6
AP003472.1-202ENST00000523870 GAPVD1Q14C86 1478 aa11.27□□□□□ -0.6
AP003472.1-202ENST00000523870 CHD1O14646 1710 aa11.26□□□□□ -0.61
AP003472.1-202ENST00000523870 SNAPC4Q5SXM2 1469 aa11.26□□□□□ -0.61
AP003472.1-202ENST00000523870 SCAF1Q9H7N4 1312 aaKnown RBP11.26□□□□□ -0.61
AP003472.1-202ENST00000523870 SYNJ2O15056 1496 aa11.23□□□□□ -0.61
AP003472.1-202ENST00000523870 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
AP003472.1-202ENST00000523870 ADAMTS12P58397 1594 aa11.22□□□□□ -0.61
AP003472.1-202ENST00000523870 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
AP003472.1-202ENST00000523870 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
AP003472.1-202ENST00000523870 FHAD1B1AJZ9 1412 aa11.17□□□□□ -0.62
AP003472.1-202ENST00000523870 KCNA4P22459 653 aa11.16□□□□□ -0.62
AP003472.1-202ENST00000523870 GRIN2AQ12879 1464 aa11.15□□□□□ -0.62
AP003472.1-202ENST00000523870 KIF27Q86VH2 1401 aa11.15□□□□□ -0.62
AP003472.1-202ENST00000523870 MAPK8IP2Q13387 824 aaPredicted RBP11.14□□□□□ -0.63
AP003472.1-202ENST00000523870 NUP160Q12769 1436 aa11.14□□□□□ -0.63
AP003472.1-202ENST00000523870 CUL7Q14999 1698 aa11.13□□□□□ -0.63
AP003472.1-202ENST00000523870 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms