RNA–Protein interactions for RNA: ENST00000522883.1

CDK16-218, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-218ENST00000522883 NISCHQ9Y2I1 1504 aa33.44■■■□□ 2.94
CDK16-218ENST00000522883 CCDC180Q9P1Z9 1646 aa29.71■■■□□ 2.35
CDK16-218ENST00000522883 ABCC9O60706 1549 aa29.04■■■□□ 2.24
CDK16-218ENST00000522883 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
CDK16-218ENST00000522883 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
CDK16-218ENST00000522883 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
CDK16-218ENST00000522883 NACADO15069 1562 aa27.86■■■□□ 2.05
CDK16-218ENST00000522883 MYO15BQ96JP2 1530 aa27.66■■■□□ 2.02
CDK16-218ENST00000522883 DCAF1Q9Y4B6 1507 aa27.61■■■□□ 2.01
CDK16-218ENST00000522883 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
CDK16-218ENST00000522883 SCRIBQ14160 1630 aa27.2■■□□□ 1.95
CDK16-218ENST00000522883 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
CDK16-218ENST00000522883 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
CDK16-218ENST00000522883 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
CDK16-218ENST00000522883 DNAJC5BQ9UF47 199 aa26.55■■□□□ 1.84
CDK16-218ENST00000522883 EIF4G1Q04637 1599 aaKnown RBP26.36■■□□□ 1.81
CDK16-218ENST00000522883 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
CDK16-218ENST00000522883 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
CDK16-218ENST00000522883 SMARCA4P51532 1647 aa25.97■■□□□ 1.75
CDK16-218ENST00000522883 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
CDK16-218ENST00000522883 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
CDK16-218ENST00000522883 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
CDK16-218ENST00000522883 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
CDK16-218ENST00000522883 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
CDK16-218ENST00000522883 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
CDK16-218ENST00000522883 HMGXB3Q12766 1538 aa25.6■■□□□ 1.69
CDK16-218ENST00000522883 WIZO95785 1651 aa25.6■■□□□ 1.69
CDK16-218ENST00000522883 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
CDK16-218ENST00000522883 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
CDK16-218ENST00000522883 TOP2AP11388 1531 aaKnown RBP25.25■■□□□ 1.63
CDK16-218ENST00000522883 NESP48681 1621 aa25.16■■□□□ 1.62
CDK16-218ENST00000522883 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
CDK16-218ENST00000522883 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
CDK16-218ENST00000522883 ERCC6Q03468 1493 aa25■■□□□ 1.59
CDK16-218ENST00000522883 CADPSQ9ULU8 1353 aa24.97■■□□□ 1.59
CDK16-218ENST00000522883 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
CDK16-218ENST00000522883 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
CDK16-218ENST00000522883 PDS5BQ9NTI5 1447 aa24.85■■□□□ 1.57
CDK16-218ENST00000522883 CFTRP13569 1480 aa24.83■■□□□ 1.57
CDK16-218ENST00000522883 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
CDK16-218ENST00000522883 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
CDK16-218ENST00000522883 FANCD2Q9BXW9 1451 aa24.72■■□□□ 1.55
CDK16-218ENST00000522883 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
CDK16-218ENST00000522883 CUX2O14529 1486 aa24.63■■□□□ 1.53
CDK16-218ENST00000522883 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
CDK16-218ENST00000522883 WDR62O43379 1518 aa24.52■■□□□ 1.52
CDK16-218ENST00000522883 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
CDK16-218ENST00000522883 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
CDK16-218ENST00000522883 DNMBPQ6XZF7 1577 aa24.33■■□□□ 1.48
CDK16-218ENST00000522883 ABCC8Q09428 1581 aa24.28■■□□□ 1.48
CDK16-218ENST00000522883 CUX1P39880 1505 aa24.21■■□□□ 1.47
CDK16-218ENST00000522883 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
CDK16-218ENST00000522883 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
CDK16-218ENST00000522883 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
CDK16-218ENST00000522883 TARBP1Q13395 1621 aaKnown RBP24.09■■□□□ 1.45
CDK16-218ENST00000522883 ZNF608Q9ULD9 1512 aaPredicted RBP24.08■■□□□ 1.45
CDK16-218ENST00000522883 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
CDK16-218ENST00000522883 WRNQ14191 1432 aaPredicted RBP eCLIP24.06■■□□□ 1.44
CDK16-218ENST00000522883 SYNJ1O43426 1573 aa24.06■■□□□ 1.44
CDK16-218ENST00000522883 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
CDK16-218ENST00000522883 SOGA1O94964 1423 aa24.03■■□□□ 1.44
CDK16-218ENST00000522883 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
CDK16-218ENST00000522883 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
CDK16-218ENST00000522883 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.423e-10■■■■■ 43
CDK16-218ENST00000522883 WDR97A6NE52 1622 aa23.93■■□□□ 1.42
CDK16-218ENST00000522883 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
CDK16-218ENST00000522883 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
CDK16-218ENST00000522883 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
CDK16-218ENST00000522883 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
CDK16-218ENST00000522883 DNAJC5Q9H3Z4 198 aa23.78■■□□□ 1.4
CDK16-218ENST00000522883 ABCA5Q8WWZ7 1642 aa23.77■■□□□ 1.4
CDK16-218ENST00000522883 GAPVD1Q14C86 1478 aa23.76■■□□□ 1.39
CDK16-218ENST00000522883 CHD1O14646 1710 aa23.74■■□□□ 1.39
CDK16-218ENST00000522883 GRIN2BQ13224 1484 aa23.73■■□□□ 1.39
CDK16-218ENST00000522883 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
CDK16-218ENST00000522883 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
CDK16-218ENST00000522883 FBLN2P98095 1184 aa23.67■■□□□ 1.38
CDK16-218ENST00000522883 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
CDK16-218ENST00000522883 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
CDK16-218ENST00000522883 CHMP7Q8WUX9 453 aaPredicted RBP23.57■■□□□ 1.36
CDK16-218ENST00000522883 SYNJ2O15056 1496 aa23.56■■□□□ 1.36
CDK16-218ENST00000522883 ERICH3Q5RHP9 1530 aa23.55■■□□□ 1.36
CDK16-218ENST00000522883 ADAMTS12P58397 1594 aa23.55■■□□□ 1.36
CDK16-218ENST00000522883 KIF27Q86VH2 1401 aa23.53■■□□□ 1.36
CDK16-218ENST00000522883 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
CDK16-218ENST00000522883 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
CDK16-218ENST00000522883 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
CDK16-218ENST00000522883 IGF1RP08069 1367 aa23.43■■□□□ 1.34
CDK16-218ENST00000522883 CUL7Q14999 1698 aa23.4■■□□□ 1.34
CDK16-218ENST00000522883 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
CDK16-218ENST00000522883 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
CDK16-218ENST00000522883 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
CDK16-218ENST00000522883 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
CDK16-218ENST00000522883 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
CDK16-218ENST00000522883 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
CDK16-218ENST00000522883 EEA1Q15075 1411 aa23.31■■□□□ 1.32
CDK16-218ENST00000522883 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
CDK16-218ENST00000522883 NUP160Q12769 1436 aa23.3■■□□□ 1.32
CDK16-218ENST00000522883 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
CDK16-218ENST00000522883 RAPGEF2Q9Y4G8 1499 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms