RNA–Protein interactions for RNA: ENST00000522880.1

SFTPC-208, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-208ENST00000522880 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
SFTPC-208ENST00000522880 CCDC180Q9P1Z9 1646 aa31.3■■■□□ 2.6
SFTPC-208ENST00000522880 ABCC9O60706 1549 aa30.42■■■□□ 2.46
SFTPC-208ENST00000522880 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
SFTPC-208ENST00000522880 DCAF8L2P0C7V8 631 aa29.44■■■□□ 2.3
SFTPC-208ENST00000522880 NACADO15069 1562 aa29.4■■■□□ 2.3
SFTPC-208ENST00000522880 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
SFTPC-208ENST00000522880 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
SFTPC-208ENST00000522880 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
SFTPC-208ENST00000522880 DNAJC5BQ9UF47 199 aa29■■■□□ 2.23
SFTPC-208ENST00000522880 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
SFTPC-208ENST00000522880 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
SFTPC-208ENST00000522880 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.14
SFTPC-208ENST00000522880 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
SFTPC-208ENST00000522880 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
SFTPC-208ENST00000522880 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
SFTPC-208ENST00000522880 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
SFTPC-208ENST00000522880 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
SFTPC-208ENST00000522880 BAZ1AQ9NRL2 1556 aaPredicted RBP27.41■■□□□ 1.98
SFTPC-208ENST00000522880 SMARCA4P51532 1647 aa27.35■■□□□ 1.97
SFTPC-208ENST00000522880 MROH2BQ7Z745 1585 aa27.22■■□□□ 1.95
SFTPC-208ENST00000522880 ATAD2BQ9ULI0 1458 aa27.18■■□□□ 1.94
SFTPC-208ENST00000522880 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
SFTPC-208ENST00000522880 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
SFTPC-208ENST00000522880 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
SFTPC-208ENST00000522880 RSF1Q96T23 1441 aaPredicted RBP27.05■■□□□ 1.92
SFTPC-208ENST00000522880 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
SFTPC-208ENST00000522880 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
SFTPC-208ENST00000522880 DNAJC5Q9H3Z4 198 aa26.97■■□□□ 1.91
SFTPC-208ENST00000522880 WIZO95785 1651 aa26.91■■□□□ 1.9
SFTPC-208ENST00000522880 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
SFTPC-208ENST00000522880 SUPT5HO00267 1087 aaKnown RBP26.56■■□□□ 1.84
SFTPC-208ENST00000522880 CCDC88BA6NC98 1476 aa26.38■■□□□ 1.81
SFTPC-208ENST00000522880 CADPSQ9ULU8 1353 aa26.37■■□□□ 1.81
SFTPC-208ENST00000522880 CUX2O14529 1486 aa26.36■■□□□ 1.81
SFTPC-208ENST00000522880 LAMC3Q9Y6N6 1575 aa26.36■■□□□ 1.81
SFTPC-208ENST00000522880 NESP48681 1621 aa26.33■■□□□ 1.81
SFTPC-208ENST00000522880 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
SFTPC-208ENST00000522880 CFTRP13569 1480 aa26.26■■□□□ 1.79
SFTPC-208ENST00000522880 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
SFTPC-208ENST00000522880 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
SFTPC-208ENST00000522880 CEP164Q9UPV0 1460 aa26■■□□□ 1.75
SFTPC-208ENST00000522880 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
SFTPC-208ENST00000522880 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
SFTPC-208ENST00000522880 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
SFTPC-208ENST00000522880 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
SFTPC-208ENST00000522880 WDR62O43379 1518 aa25.79■■□□□ 1.72
SFTPC-208ENST00000522880 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
SFTPC-208ENST00000522880 ABCC8Q09428 1581 aa25.72■■□□□ 1.71
SFTPC-208ENST00000522880 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
SFTPC-208ENST00000522880 TOPBP1Q92547 1522 aa25.64■■□□□ 1.7
SFTPC-208ENST00000522880 DNMBPQ6XZF7 1577 aa25.64■■□□□ 1.69
SFTPC-208ENST00000522880 CUX1P39880 1505 aa25.53■■□□□ 1.68
SFTPC-208ENST00000522880 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
SFTPC-208ENST00000522880 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
SFTPC-208ENST00000522880 POLA1P09884 1462 aaPredicted RBP25.45■■□□□ 1.66
SFTPC-208ENST00000522880 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
SFTPC-208ENST00000522880 TOP2BQ02880 1626 aa25.4■■□□□ 1.66
SFTPC-208ENST00000522880 SYNJ1O43426 1573 aa25.37■■□□□ 1.65
SFTPC-208ENST00000522880 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
SFTPC-208ENST00000522880 SOGA1O94964 1423 aa25.37■■□□□ 1.65
SFTPC-208ENST00000522880 TARBP1Q13395 1621 aaKnown RBP25.31■■□□□ 1.64
SFTPC-208ENST00000522880 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
SFTPC-208ENST00000522880 ZNF608Q9ULD9 1512 aaPredicted RBP25.26■■□□□ 1.63
SFTPC-208ENST00000522880 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
SFTPC-208ENST00000522880 WDR97A6NE52 1622 aa25.2■■□□□ 1.62
SFTPC-208ENST00000522880 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
SFTPC-208ENST00000522880 EIF4G3O43432 1585 aaKnown RBP25.17■■□□□ 1.62
SFTPC-208ENST00000522880 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.62
SFTPC-208ENST00000522880 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.6
SFTPC-208ENST00000522880 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
SFTPC-208ENST00000522880 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
SFTPC-208ENST00000522880 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
SFTPC-208ENST00000522880 KIF27Q86VH2 1401 aa24.99■■□□□ 1.59
SFTPC-208ENST00000522880 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
SFTPC-208ENST00000522880 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
SFTPC-208ENST00000522880 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
SFTPC-208ENST00000522880 PBRM1Q86U86 1689 aa24.92■■□□□ 1.58
SFTPC-208ENST00000522880 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
SFTPC-208ENST00000522880 RIMBP3CA6NJZ7 1639 aa24.9■■□□□ 1.58
SFTPC-208ENST00000522880 RIMBP3BA6NNM3 1639 aa24.9■■□□□ 1.58
SFTPC-208ENST00000522880 RIMBP3Q9UFD9 1639 aa24.9■■□□□ 1.58
SFTPC-208ENST00000522880 SYNJ2O15056 1496 aa24.85■■□□□ 1.57
SFTPC-208ENST00000522880 FBLN2P98095 1184 aa24.84■■□□□ 1.57
SFTPC-208ENST00000522880 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
SFTPC-208ENST00000522880 IGF1RP08069 1367 aa24.82■■□□□ 1.56
SFTPC-208ENST00000522880 FHAD1B1AJZ9 1412 aa24.82■■□□□ 1.56
SFTPC-208ENST00000522880 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
SFTPC-208ENST00000522880 CHD1O14646 1710 aa24.75■■□□□ 1.55
SFTPC-208ENST00000522880 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
SFTPC-208ENST00000522880 ARHGEF11O15085 1522 aa24.73■■□□□ 1.55
SFTPC-208ENST00000522880 CUL7Q14999 1698 aa24.72■■□□□ 1.55
SFTPC-208ENST00000522880 GRIN2AQ12879 1464 aa24.71■■□□□ 1.55
SFTPC-208ENST00000522880 EEA1Q15075 1411 aa24.71■■□□□ 1.55
SFTPC-208ENST00000522880 CARMIL1Q5VZK9 1371 aa24.69■■□□□ 1.54
SFTPC-208ENST00000522880 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
SFTPC-208ENST00000522880 NUP160Q12769 1436 aa24.61■■□□□ 1.53
SFTPC-208ENST00000522880 RAPGEF2Q9Y4G8 1499 aa24.58■■□□□ 1.52
SFTPC-208ENST00000522880 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
SFTPC-208ENST00000522880 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms