RNA–Protein interactions for RNA: ENST00000522759.1

HR-209, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 2

Gene HR, Length 1,379 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-209ENST00000522759 NISCHQ9Y2I1 1504 aa47.05■■■■■ 5.12
HR-209ENST00000522759 CCDC180Q9P1Z9 1646 aa41.71■■■■■ 4.27
HR-209ENST00000522759 ABCC9O60706 1549 aa40.67■■■■■ 4.1
HR-209ENST00000522759 DCAF8L2P0C7V8 631 aa39.28■■■■□ 3.88
HR-209ENST00000522759 ZCCHC6Q5VYS8 1495 aaKnown RBP39.28■■■■□ 3.88
HR-209ENST00000522759 RB1CC1Q8TDY2 1594 aa39.13■■■■□ 3.85
HR-209ENST00000522759 NACADO15069 1562 aa39.11■■■■□ 3.85
HR-209ENST00000522759 MYO15BQ96JP2 1530 aa38.88■■■■□ 3.81
HR-209ENST00000522759 DCAF1Q9Y4B6 1507 aa38.85■■■■□ 3.81
HR-209ENST00000522759 UNC13AQ9UPW8 1703 aa38.39■■■■□ 3.74
HR-209ENST00000522759 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
HR-209ENST00000522759 PABPN1Q86U42 306 aaKnown RBP eCLIP38.05■■■■□ 3.68
HR-209ENST00000522759 BICRAQ9NZM4 1560 aa38.01■■■■□ 3.67
HR-209ENST00000522759 SHROOM4Q9ULL8 1493 aa37.49■■■■□ 3.59
HR-209ENST00000522759 DNAJC5BQ9UF47 199 aa37.08■■■■□ 3.53
HR-209ENST00000522759 EIF4G1Q04637 1599 aaKnown RBP36.97■■■■□ 3.51
HR-209ENST00000522759 CC2D2AQ9P2K1 1620 aa36.78■■■■□ 3.48
HR-209ENST00000522759 CECR2Q9BXF3 1484 aa36.71■■■■□ 3.47
HR-209ENST00000522759 SMARCA4P51532 1647 aa36.5■■■■□ 3.43
HR-209ENST00000522759 BAZ1AQ9NRL2 1556 aaPredicted RBP36.44■■■■□ 3.42
HR-209ENST00000522759 MROH2BQ7Z745 1585 aa36.33■■■■□ 3.41
HR-209ENST00000522759 ATAD2BQ9ULI0 1458 aa36.2■■■■□ 3.39
HR-209ENST00000522759 SMARCA2P51531 1590 aa36.13■■■■□ 3.37
HR-209ENST00000522759 NCAPD3P42695 1498 aa36.07■■■■□ 3.36
HR-209ENST00000522759 PEG3Q9GZU2 1588 aa36.06■■■■□ 3.36
HR-209ENST00000522759 WIZO95785 1651 aa36■■■■□ 3.35
HR-209ENST00000522759 RSF1Q96T23 1441 aaPredicted RBP35.96■■■■□ 3.35
HR-209ENST00000522759 HMGXB3Q12766 1538 aa35.96■■■■□ 3.35
HR-209ENST00000522759 BAZ1BQ9UIG0 1483 aaKnown RBP35.93■■■■□ 3.34
HR-209ENST00000522759 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
HR-209ENST00000522759 SUPT5HO00267 1087 aaKnown RBP35.32■■■■□ 3.24
HR-209ENST00000522759 NESP48681 1621 aa35.29■■■■□ 3.24
HR-209ENST00000522759 CCDC88BA6NC98 1476 aa35.14■■■■□ 3.22
HR-209ENST00000522759 LAMC3Q9Y6N6 1575 aa35.12■■■■□ 3.21
HR-209ENST00000522759 CADPSQ9ULU8 1353 aa35.06■■■■□ 3.2
HR-209ENST00000522759 ERCC6Q03468 1493 aa34.99■■■■□ 3.19
HR-209ENST00000522759 CFTRP13569 1480 aa34.92■■■■□ 3.18
HR-209ENST00000522759 KIF21AQ7Z4S6 1674 aa34.9■■■■□ 3.18
HR-209ENST00000522759 PDS5BQ9NTI5 1447 aa34.84■■■■□ 3.17
HR-209ENST00000522759 PRDM2Q13029 1718 aa34.76■■■■□ 3.16
HR-209ENST00000522759 FANCD2Q9BXW9 1451 aa34.71■■■■□ 3.15
HR-209ENST00000522759 THOC2Q8NI27 1593 aaKnown RBP34.67■■■■□ 3.14
HR-209ENST00000522759 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
HR-209ENST00000522759 MRC2Q9UBG0 1479 aa34.53■■■■□ 3.12
HR-209ENST00000522759 CUX2O14529 1486 aa34.44■■■■□ 3.1
HR-209ENST00000522759 WDR62O43379 1518 aa34.41■■■■□ 3.1
HR-209ENST00000522759 URB2Q14146 1524 aaKnown RBP34.39■■■■□ 3.1
HR-209ENST00000522759 TOPBP1Q92547 1522 aa34.2■■■■□ 3.06
HR-209ENST00000522759 DNMBPQ6XZF7 1577 aa34.17■■■■□ 3.06
HR-209ENST00000522759 ABCC8Q09428 1581 aa34.08■■■■□ 3.05
HR-209ENST00000522759 CUX1P39880 1505 aa34.07■■■■□ 3.05
HR-209ENST00000522759 POLA1P09884 1462 aaPredicted RBP33.93■■■■□ 3.02
HR-209ENST00000522759 FGD5Q6ZNL6 1462 aa33.91■■■■□ 3.02
HR-209ENST00000522759 WRNQ14191 1432 aaPredicted RBP eCLIP33.89■■■■□ 3.02
HR-209ENST00000522759 SYNJ1O43426 1573 aa33.88■■■■□ 3.01
HR-209ENST00000522759 IFT140Q96RY7 1462 aa33.86■■■■□ 3.01
HR-209ENST00000522759 RAD54L2Q9Y4B4 1467 aa33.83■■■■□ 3.01
HR-209ENST00000522759 TARBP1Q13395 1621 aaKnown RBP33.82■■■■□ 3
HR-209ENST00000522759 BIVM-ERCC5R4GMW8 1640 aa33.82■■■■□ 3
HR-209ENST00000522759 TOP2BQ02880 1626 aa33.8■■■■□ 3
HR-209ENST00000522759 ZNF608Q9ULD9 1512 aaPredicted RBP33.79■■■■□ 3
HR-209ENST00000522759 SOGA1O94964 1423 aa33.75■■■□□ 2.99
HR-209ENST00000522759 EIF4G3O43432 1585 aaKnown RBP33.67■■■□□ 2.98
HR-209ENST00000522759 WDR97A6NE52 1622 aa33.64■■■□□ 2.98
HR-209ENST00000522759 AQRO60306 1485 aaKnown RBP eCLIP33.61■■■□□ 2.97
HR-209ENST00000522759 TDRD9Q8NDG6 1382 aaKnown RBP33.59■■■□□ 2.97
HR-209ENST00000522759 ABCA10Q8WWZ4 1543 aa33.52■■■□□ 2.96
HR-209ENST00000522759 ABCA5Q8WWZ7 1642 aa33.42■■■□□ 2.94
HR-209ENST00000522759 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
HR-209ENST00000522759 GAPVD1Q14C86 1478 aa33.38■■■□□ 2.93
HR-209ENST00000522759 DNAJC5Q9H3Z4 198 aa33.36■■■□□ 2.93
HR-209ENST00000522759 GRIN2BQ13224 1484 aa33.32■■■□□ 2.92
HR-209ENST00000522759 SNAPC4Q5SXM2 1469 aa33.32■■■□□ 2.92
HR-209ENST00000522759 TRIM41Q8WV44 630 aa33.26■■■□□ 2.92
HR-209ENST00000522759 CHD1O14646 1710 aa33.24■■■□□ 2.91
HR-209ENST00000522759 MAGI1Q96QZ7 1491 aaPredicted RBP33.19■■■□□ 2.9
HR-209ENST00000522759 FBLN2P98095 1184 aa33.15■■■□□ 2.9
HR-209ENST00000522759 KIF27Q86VH2 1401 aa33.13■■■□□ 2.89
HR-209ENST00000522759 ERICH3Q5RHP9 1530 aa33.12■■■□□ 2.89
HR-209ENST00000522759 ADAMTS12P58397 1594 aa33.1■■■□□ 2.89
HR-209ENST00000522759 SYNJ2O15056 1496 aa33.08■■■□□ 2.89
HR-209ENST00000522759 RUSC2Q8N2Y8 1516 aa33.05■■■□□ 2.88
HR-209ENST00000522759 CHIC1Q5VXU3 224 aa33.05■■■□□ 2.88
HR-209ENST00000522759 OSCARQ8IYS5 282 aa33.05■■■□□ 2.88
HR-209ENST00000522759 CHMP7Q8WUX9 453 aaPredicted RBP33.04■■■□□ 2.88
HR-209ENST00000522759 FHAD1B1AJZ9 1412 aa32.97■■■□□ 2.87
HR-209ENST00000522759 IGF1RP08069 1367 aa32.97■■■□□ 2.87
HR-209ENST00000522759 GRIN2AQ12879 1464 aa32.93■■■□□ 2.86
HR-209ENST00000522759 CUL7Q14999 1698 aa32.9■■■□□ 2.86
HR-209ENST00000522759 CEP170Q5SW79 1584 aa32.81■■■□□ 2.84
HR-209ENST00000522759 CLASP1Q7Z460 1538 aa32.8■■■□□ 2.84
HR-209ENST00000522759 CARMIL1Q5VZK9 1371 aa32.79■■■□□ 2.84
HR-209ENST00000522759 NUP160Q12769 1436 aa32.74■■■□□ 2.83
HR-209ENST00000522759 FAM9AQ8IZU1 332 aaPredicted RBP32.7■■■□□ 2.82
HR-209ENST00000522759 RAPGEF2Q9Y4G8 1499 aa32.63■■■□□ 2.81
HR-209ENST00000522759 RIMBP3CA6NJZ7 1639 aa32.62■■■□□ 2.81
HR-209ENST00000522759 RIMBP3BA6NNM3 1639 aa32.62■■■□□ 2.81
HR-209ENST00000522759 RIMBP3Q9UFD9 1639 aa32.62■■■□□ 2.81
HR-209ENST00000522759 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
HR-209ENST00000522759 EEA1Q15075 1411 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms