RNA–Protein interactions for RNA: ENST00000522672.5

MSR1-214, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-214ENST00000522672 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
MSR1-214ENST00000522672 CHIC1Q5VXU3 224 aa25.06■■□□□ 1.6
MSR1-214ENST00000522672 NISCHQ9Y2I1 1504 aa23.41■■□□□ 1.34
MSR1-214ENST00000522672 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
MSR1-214ENST00000522672 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
MSR1-214ENST00000522672 FOXD1Q16676 465 aa21.47■■□□□ 1.03
MSR1-214ENST00000522672 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
MSR1-214ENST00000522672 CCDC180Q9P1Z9 1646 aa20.94■□□□□ 0.94
MSR1-214ENST00000522672 ABCC9O60706 1549 aa20.91■□□□□ 0.94
MSR1-214ENST00000522672 MSH5O43196 834 aa20.46■□□□□ 0.87
MSR1-214ENST00000522672 PIAS4Q8N2W9 510 aaPredicted RBP19.95■□□□□ 0.78
MSR1-214ENST00000522672 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
MSR1-214ENST00000522672 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
MSR1-214ENST00000522672 NACADO15069 1562 aa19.71■□□□□ 0.75
MSR1-214ENST00000522672 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
MSR1-214ENST00000522672 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
MSR1-214ENST00000522672 PABPN1Q86U42 306 aaKnown RBP eCLIP19.49■□□□□ 0.71
MSR1-214ENST00000522672 ZCCHC6Q5VYS8 1495 aaKnown RBP19.45■□□□□ 0.7
MSR1-214ENST00000522672 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
MSR1-214ENST00000522672 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
MSR1-214ENST00000522672 ADRA2BP18089 450 aa19.38■□□□□ 0.69
MSR1-214ENST00000522672 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
MSR1-214ENST00000522672 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
MSR1-214ENST00000522672 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
MSR1-214ENST00000522672 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
MSR1-214ENST00000522672 SHROOM4Q9ULL8 1493 aa18.89■□□□□ 0.61
MSR1-214ENST00000522672 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
MSR1-214ENST00000522672 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
MSR1-214ENST00000522672 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
MSR1-214ENST00000522672 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
MSR1-214ENST00000522672 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
MSR1-214ENST00000522672 NCAPD3P42695 1498 aa18.19■□□□□ 0.5
MSR1-214ENST00000522672 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
MSR1-214ENST00000522672 SMARCA2P51531 1590 aa18.13■□□□□ 0.49
MSR1-214ENST00000522672 MROH2BQ7Z745 1585 aa18.12■□□□□ 0.49
MSR1-214ENST00000522672 HMGXB3Q12766 1538 aa18.09■□□□□ 0.49
MSR1-214ENST00000522672 CACNB1Q02641 598 aaPredicted RBP18.07■□□□□ 0.48
MSR1-214ENST00000522672 DMRT2Q9Y5R5 561 aa18.07■□□□□ 0.48
MSR1-214ENST00000522672 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
MSR1-214ENST00000522672 NESP48681 1621 aa18.04■□□□□ 0.48
MSR1-214ENST00000522672 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
MSR1-214ENST00000522672 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
MSR1-214ENST00000522672 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
MSR1-214ENST00000522672 WIZO95785 1651 aa17.96■□□□□ 0.47
MSR1-214ENST00000522672 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
MSR1-214ENST00000522672 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
MSR1-214ENST00000522672 CUX2O14529 1486 aa17.82■□□□□ 0.44
MSR1-214ENST00000522672 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
MSR1-214ENST00000522672 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
MSR1-214ENST00000522672 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
MSR1-214ENST00000522672 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
MSR1-214ENST00000522672 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
MSR1-214ENST00000522672 TOP2AP11388 1531 aaKnown RBP17.63■□□□□ 0.41
MSR1-214ENST00000522672 PDS5BQ9NTI5 1447 aa17.63■□□□□ 0.41
MSR1-214ENST00000522672 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
MSR1-214ENST00000522672 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
MSR1-214ENST00000522672 WDR62O43379 1518 aa17.52■□□□□ 0.39
MSR1-214ENST00000522672 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
MSR1-214ENST00000522672 CEP164Q9UPV0 1460 aa17.5■□□□□ 0.39
MSR1-214ENST00000522672 CFTRP13569 1480 aa17.5■□□□□ 0.39
MSR1-214ENST00000522672 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
MSR1-214ENST00000522672 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
MSR1-214ENST00000522672 URB2Q14146 1524 aaKnown RBP17.41■□□□□ 0.38
MSR1-214ENST00000522672 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
MSR1-214ENST00000522672 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
MSR1-214ENST00000522672 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
MSR1-214ENST00000522672 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
MSR1-214ENST00000522672 SUPT5HO00267 1087 aaKnown RBP17.13■□□□□ 0.33
MSR1-214ENST00000522672 IFT140Q96RY7 1462 aa17.12■□□□□ 0.33
MSR1-214ENST00000522672 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
MSR1-214ENST00000522672 TRIM41Q8WV44 630 aa17.08■□□□□ 0.32
MSR1-214ENST00000522672 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
MSR1-214ENST00000522672 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
MSR1-214ENST00000522672 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
MSR1-214ENST00000522672 POLA1P09884 1462 aaPredicted RBP17.05■□□□□ 0.32
MSR1-214ENST00000522672 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
MSR1-214ENST00000522672 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
MSR1-214ENST00000522672 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.32
MSR1-214ENST00000522672 CHD1O14646 1710 aa17.01■□□□□ 0.31
MSR1-214ENST00000522672 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
MSR1-214ENST00000522672 CUX1P39880 1505 aa17.01■□□□□ 0.31
MSR1-214ENST00000522672 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
MSR1-214ENST00000522672 TDRD9Q8NDG6 1382 aaKnown RBP16.94■□□□□ 0.3
MSR1-214ENST00000522672 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
MSR1-214ENST00000522672 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
MSR1-214ENST00000522672 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
MSR1-214ENST00000522672 SOGA1O94964 1423 aa16.93■□□□□ 0.3
MSR1-214ENST00000522672 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
MSR1-214ENST00000522672 FBLN2P98095 1184 aa16.88■□□□□ 0.29
MSR1-214ENST00000522672 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
MSR1-214ENST00000522672 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
MSR1-214ENST00000522672 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
MSR1-214ENST00000522672 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
MSR1-214ENST00000522672 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
MSR1-214ENST00000522672 RNF216Q9NWF9 866 aaPredicted RBP16.77■□□□□ 0.28
MSR1-214ENST00000522672 ABCA5Q8WWZ7 1642 aa16.77■□□□□ 0.27
MSR1-214ENST00000522672 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
MSR1-214ENST00000522672 BIVM-ERCC5R4GMW8 1640 aa16.75■□□□□ 0.27
MSR1-214ENST00000522672 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
MSR1-214ENST00000522672 GAPVD1Q14C86 1478 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms