RNA–Protein interactions for RNA: ENST00000522642.1

GINS4-208, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 390 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-208ENST00000522642 NISCHQ9Y2I1 1504 aa18.45■□□□□ 0.54
GINS4-208ENST00000522642 ABCC9O60706 1549 aa17.63■□□□□ 0.41
GINS4-208ENST00000522642 DNAJC5BQ9UF47 199 aa17.18■□□□□ 0.34
GINS4-208ENST00000522642 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
GINS4-208ENST00000522642 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
GINS4-208ENST00000522642 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
GINS4-208ENST00000522642 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
GINS4-208ENST00000522642 NACADO15069 1562 aa16.21■□□□□ 0.18
GINS4-208ENST00000522642 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
GINS4-208ENST00000522642 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
GINS4-208ENST00000522642 BICRAQ9NZM4 1560 aa15.9■□□□□ 0.14
GINS4-208ENST00000522642 UNC13AQ9UPW8 1703 aa15.9■□□□□ 0.14
GINS4-208ENST00000522642 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
GINS4-208ENST00000522642 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
GINS4-208ENST00000522642 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
GINS4-208ENST00000522642 EIF4G1Q04637 1599 aaKnown RBP15.65■□□□□ 0.1
GINS4-208ENST00000522642 CUX2O14529 1486 aa15.59■□□□□ 0.09
GINS4-208ENST00000522642 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
GINS4-208ENST00000522642 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
GINS4-208ENST00000522642 SCRIBQ14160 1630 aa15.33■□□□□ 0.04
GINS4-208ENST00000522642 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
GINS4-208ENST00000522642 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
GINS4-208ENST00000522642 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
GINS4-208ENST00000522642 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
GINS4-208ENST00000522642 NESP48681 1621 aa14.87□□□□□ -0.03
GINS4-208ENST00000522642 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
GINS4-208ENST00000522642 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
GINS4-208ENST00000522642 PDS5BQ9NTI5 1447 aa14.78□□□□□ -0.04
GINS4-208ENST00000522642 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.04
GINS4-208ENST00000522642 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
GINS4-208ENST00000522642 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
GINS4-208ENST00000522642 LAMC3Q9Y6N6 1575 aa14.74□□□□□ -0.05
GINS4-208ENST00000522642 BAZ1AQ9NRL2 1556 aaPredicted RBP14.67□□□□□ -0.06
GINS4-208ENST00000522642 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
GINS4-208ENST00000522642 BAZ1BQ9UIG0 1483 aaKnown RBP14.63□□□□□ -0.07
GINS4-208ENST00000522642 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
GINS4-208ENST00000522642 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
GINS4-208ENST00000522642 WDR62O43379 1518 aa14.54□□□□□ -0.08
GINS4-208ENST00000522642 RIMBP3CA6NJZ7 1639 aa14.53□□□□□ -0.08
GINS4-208ENST00000522642 RIMBP3BA6NNM3 1639 aa14.53□□□□□ -0.08
GINS4-208ENST00000522642 RIMBP3Q9UFD9 1639 aa14.53□□□□□ -0.08
GINS4-208ENST00000522642 SMARCA4P51532 1647 aa14.52□□□□□ -0.09
GINS4-208ENST00000522642 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
GINS4-208ENST00000522642 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
GINS4-208ENST00000522642 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
GINS4-208ENST00000522642 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
GINS4-208ENST00000522642 PEG3Q9GZU2 1588 aa14.39□□□□□ -0.11
GINS4-208ENST00000522642 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
GINS4-208ENST00000522642 ARAP1Q96P48 1450 aa14.23□□□□□ -0.13
GINS4-208ENST00000522642 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
GINS4-208ENST00000522642 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
GINS4-208ENST00000522642 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
GINS4-208ENST00000522642 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
GINS4-208ENST00000522642 MROH2BQ7Z745 1585 aa14.16□□□□□ -0.14
GINS4-208ENST00000522642 FBLN2P98095 1184 aa14.14□□□□□ -0.15
GINS4-208ENST00000522642 CFTRP13569 1480 aa14.13□□□□□ -0.15
GINS4-208ENST00000522642 ZNF608Q9ULD9 1512 aaPredicted RBP14.1□□□□□ -0.15
GINS4-208ENST00000522642 CHD1O14646 1710 aa13.99□□□□□ -0.17
GINS4-208ENST00000522642 EIF4G3O43432 1585 aaKnown RBP13.98□□□□□ -0.17
GINS4-208ENST00000522642 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
GINS4-208ENST00000522642 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.18
GINS4-208ENST00000522642 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
GINS4-208ENST00000522642 WIZO95785 1651 aa13.92□□□□□ -0.18
GINS4-208ENST00000522642 TOPBP1Q92547 1522 aa13.91□□□□□ -0.18
GINS4-208ENST00000522642 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
GINS4-208ENST00000522642 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
GINS4-208ENST00000522642 CLASP1Q7Z460 1538 aa13.85□□□□□ -0.19
GINS4-208ENST00000522642 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
GINS4-208ENST00000522642 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
GINS4-208ENST00000522642 KDM4FA0A1W2PPD8 638 aa13.79□□□□□ -0.2
GINS4-208ENST00000522642 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
GINS4-208ENST00000522642 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
GINS4-208ENST00000522642 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
GINS4-208ENST00000522642 MAGI1Q96QZ7 1491 aaPredicted RBP13.76□□□□□ -0.21
GINS4-208ENST00000522642 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
GINS4-208ENST00000522642 SOGA1O94964 1423 aa13.73□□□□□ -0.21
GINS4-208ENST00000522642 SYNJ2O15056 1496 aa13.72□□□□□ -0.21
GINS4-208ENST00000522642 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
GINS4-208ENST00000522642 WDR97A6NE52 1622 aa13.71□□□□□ -0.22
GINS4-208ENST00000522642 GRIN2BQ13224 1484 aa13.69□□□□□ -0.22
GINS4-208ENST00000522642 FBXO41Q8TF61 875 aa13.69□□□□□ -0.22
GINS4-208ENST00000522642 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
GINS4-208ENST00000522642 NPM1P06748 294 aaKnown RBP eCLIP13.67□□□□□ -0.22
GINS4-208ENST00000522642 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
GINS4-208ENST00000522642 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
GINS4-208ENST00000522642 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
GINS4-208ENST00000522642 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
GINS4-208ENST00000522642 KDM6BO15054 1643 aa13.59□□□□□ -0.23
GINS4-208ENST00000522642 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
GINS4-208ENST00000522642 FGD5Q6ZNL6 1462 aa13.53□□□□□ -0.24
GINS4-208ENST00000522642 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.25
GINS4-208ENST00000522642 CEP170Q5SW79 1584 aa13.51□□□□□ -0.25
GINS4-208ENST00000522642 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
GINS4-208ENST00000522642 ADGRL1O94910 1474 aa13.49□□□□□ -0.25
GINS4-208ENST00000522642 MAPKBP1O60336 1514 aa13.47□□□□□ -0.25
GINS4-208ENST00000522642 GRIN2AQ12879 1464 aa13.47□□□□□ -0.25
GINS4-208ENST00000522642 SOCS7O14512 581 aa13.45□□□□□ -0.26
GINS4-208ENST00000522642 NUP160Q12769 1436 aa13.45□□□□□ -0.26
GINS4-208ENST00000522642 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
GINS4-208ENST00000522642 PBRM1Q86U86 1689 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms