RNA–Protein interactions for RNA: ENST00000522621.1

CLVS1-208, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-208ENST00000522621 NISCHQ9Y2I1 1504 aa12.43□□□□□ -0.42
CLVS1-208ENST00000522621 CCDC180Q9P1Z9 1646 aa10.82□□□□□ -0.68
CLVS1-208ENST00000522621 DCAF8L2P0C7V8 631 aa10.48□□□□□ -0.73
CLVS1-208ENST00000522621 ZCCHC6Q5VYS8 1495 aaKnown RBP10.4□□□□□ -0.74
CLVS1-208ENST00000522621 DCAF1Q9Y4B6 1507 aa10.3□□□□□ -0.76
CLVS1-208ENST00000522621 ABCC9O60706 1549 aa10.23□□□□□ -0.77
CLVS1-208ENST00000522621 MYO15BQ96JP2 1530 aa10.19□□□□□ -0.78
CLVS1-208ENST00000522621 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
CLVS1-208ENST00000522621 NACADO15069 1562 aa10.14□□□□□ -0.79
CLVS1-208ENST00000522621 RB1CC1Q8TDY2 1594 aa10.05□□□□□ -0.8
CLVS1-208ENST00000522621 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
CLVS1-208ENST00000522621 SUPT5HO00267 1087 aaKnown RBP9.92□□□□□ -0.82
CLVS1-208ENST00000522621 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLVS1-208ENST00000522621 BAZ1AQ9NRL2 1556 aaPredicted RBP9.65□□□□□ -0.86
CLVS1-208ENST00000522621 UNC13AQ9UPW8 1703 aa9.65□□□□□ -0.87
CLVS1-208ENST00000522621 RSF1Q96T23 1441 aaPredicted RBP9.65□□□□□ -0.87
CLVS1-208ENST00000522621 CECR2Q9BXF3 1484 aa9.59□□□□□ -0.87
CLVS1-208ENST00000522621 BICRAQ9NZM4 1560 aa9.58□□□□□ -0.88
CLVS1-208ENST00000522621 AEBP2Q6ZN18 517 aaPredicted RBP9.56□□□□□ -0.88
CLVS1-208ENST00000522621 MROH2BQ7Z745 1585 aa9.55□□□□□ -0.88
CLVS1-208ENST00000522621 SMARCA4P51532 1647 aa9.52□□□□□ -0.89
CLVS1-208ENST00000522621 WIZO95785 1651 aa9.47□□□□□ -0.89
CLVS1-208ENST00000522621 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
CLVS1-208ENST00000522621 CHIC1Q5VXU3 224 aa9.43□□□□□ -0.9
CLVS1-208ENST00000522621 TOP2AP11388 1531 aaKnown RBP9.42□□□□□ -0.9
CLVS1-208ENST00000522621 PEG3Q9GZU2 1588 aa9.4□□□□□ -0.9
CLVS1-208ENST00000522621 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.91
CLVS1-208ENST00000522621 TRIM41Q8WV44 630 aa9.39□□□□□ -0.91
CLVS1-208ENST00000522621 ATAD2BQ9ULI0 1458 aa9.39□□□□□ -0.91
CLVS1-208ENST00000522621 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
CLVS1-208ENST00000522621 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
CLVS1-208ENST00000522621 CCDC88BA6NC98 1476 aa9.34□□□□□ -0.91
CLVS1-208ENST00000522621 HMGXB3Q12766 1538 aa9.3□□□□□ -0.92
CLVS1-208ENST00000522621 CC2D2AQ9P2K1 1620 aa9.23□□□□□ -0.93
CLVS1-208ENST00000522621 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.95
CLVS1-208ENST00000522621 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
CLVS1-208ENST00000522621 FAM9AQ8IZU1 332 aaPredicted RBP9.14□□□□□ -0.95
CLVS1-208ENST00000522621 CFTRP13569 1480 aa9.13□□□□□ -0.95
CLVS1-208ENST00000522621 EEA1Q15075 1411 aa9.11□□□□□ -0.95
CLVS1-208ENST00000522621 ABCC8Q09428 1581 aa9.08□□□□□ -0.96
CLVS1-208ENST00000522621 LOC105371045A0A1W2PR82 267 aa9.07□□□□□ -0.96
CLVS1-208ENST00000522621 CSRNP3Q8WYN3 585 aa9.06□□□□□ -0.96
CLVS1-208ENST00000522621 PDS5BQ9NTI5 1447 aa9.05□□□□□ -0.96
CLVS1-208ENST00000522621 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
CLVS1-208ENST00000522621 UBTFP17480 764 aaKnown RBP9.01□□□□□ -0.97
CLVS1-208ENST00000522621 PRDM2Q13029 1718 aa9.01□□□□□ -0.97
CLVS1-208ENST00000522621 FANCD2Q9BXW9 1451 aa9.01□□□□□ -0.97
CLVS1-208ENST00000522621 TOP2BQ02880 1626 aa9□□□□□ -0.97
CLVS1-208ENST00000522621 EHMT2Q96KQ7 1210 aa8.99□□□□□ -0.97
CLVS1-208ENST00000522621 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
CLVS1-208ENST00000522621 KIF27Q86VH2 1401 aa8.97□□□□□ -0.97
CLVS1-208ENST00000522621 CEP164Q9UPV0 1460 aa8.97□□□□□ -0.97
CLVS1-208ENST00000522621 SOGA1O94964 1423 aa8.97□□□□□ -0.97
CLVS1-208ENST00000522621 BIVM-ERCC5R4GMW8 1640 aa8.96□□□□□ -0.98
CLVS1-208ENST00000522621 DNAJC5BQ9UF47 199 aa8.94□□□□□ -0.98
CLVS1-208ENST00000522621 CUX1P39880 1505 aa8.93□□□□□ -0.98
CLVS1-208ENST00000522621 NESP48681 1621 aa8.92□□□□□ -0.98
CLVS1-208ENST00000522621 GOLGA3Q08378 1498 aa8.92□□□□□ -0.98
CLVS1-208ENST00000522621 TNIKQ9UKE5 1360 aa8.91□□□□□ -0.98
CLVS1-208ENST00000522621 DNMBPQ6XZF7 1577 aa8.9□□□□□ -0.98
CLVS1-208ENST00000522621 ERCC6Q03468 1493 aa8.89□□□□□ -0.99
CLVS1-208ENST00000522621 FGD5Q6ZNL6 1462 aa8.89□□□□□ -0.99
CLVS1-208ENST00000522621 RUSC2Q8N2Y8 1516 aa8.88□□□□□ -0.99
CLVS1-208ENST00000522621 TOPBP1Q92547 1522 aa8.88□□□□□ -0.99
CLVS1-208ENST00000522621 CUX2O14529 1486 aa8.88□□□□□ -0.99
CLVS1-208ENST00000522621 APLP2Q06481 763 aa8.87□□□□□ -0.99
CLVS1-208ENST00000522621 KIF21BO75037 1637 aa8.85□□□□□ -0.99
CLVS1-208ENST00000522621 MRC2Q9UBG0 1479 aa8.84□□□□□ -0.99
CLVS1-208ENST00000522621 CARMIL1Q5VZK9 1371 aa8.83□□□□□ -1
CLVS1-208ENST00000522621 ERICH3Q5RHP9 1530 aa8.82□□□□□ -1
CLVS1-208ENST00000522621 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
CLVS1-208ENST00000522621 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
CLVS1-208ENST00000522621 IGF1RP08069 1367 aa8.82□□□□□ -1
CLVS1-208ENST00000522621 POLA1P09884 1462 aaPredicted RBP8.82□□□□□ -1
CLVS1-208ENST00000522621 CEP162Q5TB80 1403 aa8.81□□□□□ -1
CLVS1-208ENST00000522621 URB2Q14146 1524 aaKnown RBP8.81□□□□□ -1
CLVS1-208ENST00000522621 PRXQ9BXM0 1461 aa8.8□□□□□ -1
CLVS1-208ENST00000522621 RAPGEF2Q9Y4G8 1499 aa8.8□□□□□ -1
CLVS1-208ENST00000522621 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
CLVS1-208ENST00000522621 RAD54L2Q9Y4B4 1467 aa8.79□□□□□ -1
CLVS1-208ENST00000522621 RANGAP1P46060 587 aaPredicted RBP8.79□□□□□ -1
CLVS1-208ENST00000522621 CLIP1P30622 1438 aa8.78□□□□□ -1
CLVS1-208ENST00000522621 GAPVD1Q14C86 1478 aa8.77□□□□□ -1
CLVS1-208ENST00000522621 IFT140Q96RY7 1462 aa8.77□□□□□ -1
CLVS1-208ENST00000522621 TDRD9Q8NDG6 1382 aaKnown RBP8.76□□□□□ -1.01
CLVS1-208ENST00000522621 PCGF6Q9BYE7 350 aa8.76□□□□□ -1.01
CLVS1-208ENST00000522621 CUL7Q14999 1698 aa8.75□□□□□ -1.01
CLVS1-208ENST00000522621 WDR62O43379 1518 aa8.74□□□□□ -1.01
CLVS1-208ENST00000522621 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
CLVS1-208ENST00000522621 GRIN2BQ13224 1484 aa8.71□□□□□ -1.01
CLVS1-208ENST00000522621 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
CLVS1-208ENST00000522621 FHAD1B1AJZ9 1412 aa8.7□□□□□ -1.02
CLVS1-208ENST00000522621 VPS8Q8N3P4 1428 aa8.69□□□□□ -1.02
CLVS1-208ENST00000522621 TARBP1Q13395 1621 aaKnown RBP8.69□□□□□ -1.02
CLVS1-208ENST00000522621 ABCA5Q8WWZ7 1642 aa8.68□□□□□ -1.02
CLVS1-208ENST00000522621 AQRO60306 1485 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLVS1-208ENST00000522621 FBLN2P98095 1184 aa8.66□□□□□ -1.02
CLVS1-208ENST00000522621 ATP1B4Q9UN42 357 aaPredicted RBP8.66□□□□□ -1.02
CLVS1-208ENST00000522621 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
CLVS1-208ENST00000522621 THOC2Q8NI27 1593 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms