RNA–Protein interactions for RNA: ENST00000522610.5

POLB-213, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 1,341 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-213ENST00000522610 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
POLB-213ENST00000522610 AEBP2Q6ZN18 517 aaPredicted RBP27.74■■■□□ 2.03
POLB-213ENST00000522610 CHIC1Q5VXU3 224 aa26.38■■□□□ 1.81
POLB-213ENST00000522610 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
POLB-213ENST00000522610 ABCC9O60706 1549 aa25.53■■□□□ 1.68
POLB-213ENST00000522610 ZCCHC6Q5VYS8 1495 aaKnown RBP24.55■■□□□ 1.52
POLB-213ENST00000522610 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
POLB-213ENST00000522610 NACADO15069 1562 aa24.52■■□□□ 1.52
POLB-213ENST00000522610 DCAF8L2P0C7V8 631 aa24.52■■□□□ 1.52
POLB-213ENST00000522610 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.5
POLB-213ENST00000522610 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
POLB-213ENST00000522610 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
POLB-213ENST00000522610 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
POLB-213ENST00000522610 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
POLB-213ENST00000522610 PABPN1Q86U42 306 aaKnown RBP eCLIP23.84■■□□□ 1.41
POLB-213ENST00000522610 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
POLB-213ENST00000522610 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
POLB-213ENST00000522610 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
POLB-213ENST00000522610 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.32
POLB-213ENST00000522610 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
POLB-213ENST00000522610 CC2D2AQ9P2K1 1620 aa23.07■■□□□ 1.28
POLB-213ENST00000522610 CECR2Q9BXF3 1484 aa22.93■■□□□ 1.26
POLB-213ENST00000522610 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
POLB-213ENST00000522610 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
POLB-213ENST00000522610 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
POLB-213ENST00000522610 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
POLB-213ENST00000522610 SMARCA2P51531 1590 aa22.64■■□□□ 1.21
POLB-213ENST00000522610 NCAPD3P42695 1498 aa22.62■■□□□ 1.21
POLB-213ENST00000522610 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
POLB-213ENST00000522610 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
POLB-213ENST00000522610 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
POLB-213ENST00000522610 RSF1Q96T23 1441 aaPredicted RBP22.45■■□□□ 1.19
POLB-213ENST00000522610 WIZO95785 1651 aa22.45■■□□□ 1.18
POLB-213ENST00000522610 TOP2AP11388 1531 aaKnown RBP22.22■■□□□ 1.15
POLB-213ENST00000522610 FOXD1Q16676 465 aa22.12■■□□□ 1.13
POLB-213ENST00000522610 NESP48681 1621 aa22.11■■□□□ 1.13
POLB-213ENST00000522610 LAMC3Q9Y6N6 1575 aa22.03■■□□□ 1.12
POLB-213ENST00000522610 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
POLB-213ENST00000522610 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
POLB-213ENST00000522610 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
POLB-213ENST00000522610 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
POLB-213ENST00000522610 CFTRP13569 1480 aa21.88■■□□□ 1.09
POLB-213ENST00000522610 PDS5BQ9NTI5 1447 aa21.86■■□□□ 1.09
POLB-213ENST00000522610 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
POLB-213ENST00000522610 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
POLB-213ENST00000522610 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
POLB-213ENST00000522610 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
POLB-213ENST00000522610 CUX2O14529 1486 aa21.69■■□□□ 1.06
POLB-213ENST00000522610 PRDM2Q13029 1718 aa21.69■■□□□ 1.06
POLB-213ENST00000522610 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
POLB-213ENST00000522610 WDR62O43379 1518 aa21.61■■□□□ 1.05
POLB-213ENST00000522610 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
POLB-213ENST00000522610 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
POLB-213ENST00000522610 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
POLB-213ENST00000522610 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
POLB-213ENST00000522610 CUX1P39880 1505 aa21.3■■□□□ 1
POLB-213ENST00000522610 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
POLB-213ENST00000522610 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
POLB-213ENST00000522610 FGD5Q6ZNL6 1462 aa21.21■□□□□ 0.99
POLB-213ENST00000522610 ZNF608Q9ULD9 1512 aaPredicted RBP21.18■□□□□ 0.98
POLB-213ENST00000522610 WRNQ14191 1432 aaPredicted RBP eCLIP21.17■□□□□ 0.98
POLB-213ENST00000522610 TARBP1Q13395 1621 aaKnown RBP21.17■□□□□ 0.98
POLB-213ENST00000522610 RAD54L2Q9Y4B4 1467 aa21.15■□□□□ 0.98
POLB-213ENST00000522610 SYNJ1O43426 1573 aa21.14■□□□□ 0.97
POLB-213ENST00000522610 SOGA1O94964 1423 aa21.12■□□□□ 0.97
POLB-213ENST00000522610 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
POLB-213ENST00000522610 TOP2BQ02880 1626 aa21.11■□□□□ 0.97
POLB-213ENST00000522610 BIVM-ERCC5R4GMW8 1640 aa21.11■□□□□ 0.97
POLB-213ENST00000522610 PLPPR3Q6T4P5 718 aa21.1■□□□□ 0.97
POLB-213ENST00000522610 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.96
POLB-213ENST00000522610 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
POLB-213ENST00000522610 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
POLB-213ENST00000522610 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
POLB-213ENST00000522610 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
POLB-213ENST00000522610 DNAJC5Q9H3Z4 198 aa20.91■□□□□ 0.94
POLB-213ENST00000522610 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
POLB-213ENST00000522610 MSH5O43196 834 aa20.89■□□□□ 0.93
POLB-213ENST00000522610 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
POLB-213ENST00000522610 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
POLB-213ENST00000522610 PBRM1Q86U86 1689 aa20.85■□□□□ 0.93
POLB-213ENST00000522610 MAGI1Q96QZ7 1491 aaPredicted RBP20.82■□□□□ 0.92
POLB-213ENST00000522610 CHD1O14646 1710 aa20.79■□□□□ 0.92
POLB-213ENST00000522610 OSCARQ8IYS5 282 aa20.77■□□□□ 0.91
POLB-213ENST00000522610 FBLN2P98095 1184 aa20.76■□□□□ 0.91
POLB-213ENST00000522610 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
POLB-213ENST00000522610 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
POLB-213ENST00000522610 ADAMTS12P58397 1594 aa20.73■□□□□ 0.91
POLB-213ENST00000522610 PIAS4Q8N2W9 510 aaPredicted RBP20.73■□□□□ 0.91
POLB-213ENST00000522610 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
POLB-213ENST00000522610 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
POLB-213ENST00000522610 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
POLB-213ENST00000522610 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
POLB-213ENST00000522610 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
POLB-213ENST00000522610 IGF1RP08069 1367 aa20.6■□□□□ 0.89
POLB-213ENST00000522610 CLASP1Q7Z460 1538 aa20.59■□□□□ 0.89
POLB-213ENST00000522610 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
POLB-213ENST00000522610 CUL7Q14999 1698 aa20.56■□□□□ 0.88
POLB-213ENST00000522610 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
POLB-213ENST00000522610 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
POLB-213ENST00000522610 NUP160Q12769 1436 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms