RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-219ENST00000522321 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
SPIDR-219ENST00000522321 CCDC180Q9P1Z9 1646 aa25.25■■□□□ 1.63
SPIDR-219ENST00000522321 ABCC9O60706 1549 aa24.64■■□□□ 1.53
SPIDR-219ENST00000522321 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
SPIDR-219ENST00000522321 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
SPIDR-219ENST00000522321 DCAF1Q9Y4B6 1507 aa23.73■■□□□ 1.39
SPIDR-219ENST00000522321 NACADO15069 1562 aa23.64■■□□□ 1.37
SPIDR-219ENST00000522321 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
SPIDR-219ENST00000522321 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
SPIDR-219ENST00000522321 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
SPIDR-219ENST00000522321 SCRIBQ14160 1630 aa23.15■■□□□ 1.3
SPIDR-219ENST00000522321 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
SPIDR-219ENST00000522321 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
SPIDR-219ENST00000522321 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
SPIDR-219ENST00000522321 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
SPIDR-219ENST00000522321 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
SPIDR-219ENST00000522321 BAZ1AQ9NRL2 1556 aaPredicted RBP22.23■■□□□ 1.15
SPIDR-219ENST00000522321 CC2D2AQ9P2K1 1620 aa22.16■■□□□ 1.14
SPIDR-219ENST00000522321 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
SPIDR-219ENST00000522321 SMARCA4P51532 1647 aa22.14■■□□□ 1.14
SPIDR-219ENST00000522321 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
SPIDR-219ENST00000522321 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
SPIDR-219ENST00000522321 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
SPIDR-219ENST00000522321 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
SPIDR-219ENST00000522321 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
SPIDR-219ENST00000522321 WIZO95785 1651 aa21.88■■□□□ 1.09
SPIDR-219ENST00000522321 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
SPIDR-219ENST00000522321 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
SPIDR-219ENST00000522321 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
SPIDR-219ENST00000522321 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
SPIDR-219ENST00000522321 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
SPIDR-219ENST00000522321 DNAJC5Q9H3Z4 198 aa21.57■■□□□ 1.04
SPIDR-219ENST00000522321 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
SPIDR-219ENST00000522321 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
SPIDR-219ENST00000522321 CUX2O14529 1486 aa21.26■□□□□ 0.99
SPIDR-219ENST00000522321 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
SPIDR-219ENST00000522321 CFTRP13569 1480 aa21.17■□□□□ 0.98
SPIDR-219ENST00000522321 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
SPIDR-219ENST00000522321 NESP48681 1621 aa21.11■□□□□ 0.97
SPIDR-219ENST00000522321 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
SPIDR-219ENST00000522321 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
SPIDR-219ENST00000522321 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
SPIDR-219ENST00000522321 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
SPIDR-219ENST00000522321 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
SPIDR-219ENST00000522321 KIF21AQ7Z4S6 1674 aa20.85■□□□□ 0.93
SPIDR-219ENST00000522321 WRNQ14191 1432 aaPredicted RBP eCLIP20.84■□□□□ 0.93
SPIDR-219ENST00000522321 MRC2Q9UBG0 1479 aa20.79■□□□□ 0.92
SPIDR-219ENST00000522321 THOC2Q8NI27 1593 aaKnown RBP20.79■□□□□ 0.92
SPIDR-219ENST00000522321 CHIC1Q5VXU3 224 aa20.75■□□□□ 0.91
SPIDR-219ENST00000522321 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
SPIDR-219ENST00000522321 DNMBPQ6XZF7 1577 aa20.73■□□□□ 0.91
SPIDR-219ENST00000522321 CUX1P39880 1505 aa20.72■□□□□ 0.91
SPIDR-219ENST00000522321 SYNJ1O43426 1573 aa20.71■□□□□ 0.91
SPIDR-219ENST00000522321 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
SPIDR-219ENST00000522321 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
SPIDR-219ENST00000522321 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
SPIDR-219ENST00000522321 WDR62O43379 1518 aa20.66■□□□□ 0.9
SPIDR-219ENST00000522321 BIVM-ERCC5R4GMW8 1640 aa20.65■□□□□ 0.9
SPIDR-219ENST00000522321 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
SPIDR-219ENST00000522321 POLA1P09884 1462 aaPredicted RBP20.56■□□□□ 0.88
SPIDR-219ENST00000522321 SOGA1O94964 1423 aa20.49■□□□□ 0.87
SPIDR-219ENST00000522321 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
SPIDR-219ENST00000522321 RAD54L2Q9Y4B4 1467 aa20.45■□□□□ 0.86
SPIDR-219ENST00000522321 ABCA10Q8WWZ4 1543 aa20.4■□□□□ 0.86
SPIDR-219ENST00000522321 OSCARQ8IYS5 282 aa20.39■□□□□ 0.85
SPIDR-219ENST00000522321 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
SPIDR-219ENST00000522321 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
SPIDR-219ENST00000522321 EEA1Q15075 1411 aa20.35■□□□□ 0.85
SPIDR-219ENST00000522321 WDR97A6NE52 1622 aa20.33■□□□□ 0.84
SPIDR-219ENST00000522321 FAM9AQ8IZU1 332 aaPredicted RBP20.32■□□□□ 0.84
SPIDR-219ENST00000522321 TDRD9Q8NDG6 1382 aaKnown RBP20.31■□□□□ 0.84
SPIDR-219ENST00000522321 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
SPIDR-219ENST00000522321 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.84
SPIDR-219ENST00000522321 ABCA5Q8WWZ7 1642 aa20.26■□□□□ 0.83
SPIDR-219ENST00000522321 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
SPIDR-219ENST00000522321 EIF4G3O43432 1585 aaKnown RBP20.25■□□□□ 0.83
SPIDR-219ENST00000522321 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.83
SPIDR-219ENST00000522321 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
SPIDR-219ENST00000522321 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
SPIDR-219ENST00000522321 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
SPIDR-219ENST00000522321 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
SPIDR-219ENST00000522321 IGF1RP08069 1367 aa20.13■□□□□ 0.81
SPIDR-219ENST00000522321 SNAPC4Q5SXM2 1469 aa20.12■□□□□ 0.81
SPIDR-219ENST00000522321 CUL7Q14999 1698 aa20.11■□□□□ 0.81
SPIDR-219ENST00000522321 MAGI1Q96QZ7 1491 aaPredicted RBP20.09■□□□□ 0.81
SPIDR-219ENST00000522321 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.81
SPIDR-219ENST00000522321 ADAMTS12P58397 1594 aa20.07■□□□□ 0.8
SPIDR-219ENST00000522321 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
SPIDR-219ENST00000522321 EHMT2Q96KQ7 1210 aa20.06■□□□□ 0.8
SPIDR-219ENST00000522321 KIF21BO75037 1637 aa20.05■□□□□ 0.8
SPIDR-219ENST00000522321 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
SPIDR-219ENST00000522321 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
SPIDR-219ENST00000522321 RAPGEF2Q9Y4G8 1499 aa20.04■□□□□ 0.8
SPIDR-219ENST00000522321 SYNJ2O15056 1496 aa20.01■□□□□ 0.79
SPIDR-219ENST00000522321 FBLN2P98095 1184 aa20■□□□□ 0.79
SPIDR-219ENST00000522321 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
SPIDR-219ENST00000522321 RIMBP3CA6NJZ7 1639 aa20■□□□□ 0.79
SPIDR-219ENST00000522321 RIMBP3BA6NNM3 1639 aa20■□□□□ 0.79
SPIDR-219ENST00000522321 RIMBP3Q9UFD9 1639 aa20■□□□□ 0.79
SPIDR-219ENST00000522321 UBTFP17480 764 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms