RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
CDH12-208ENST00000522262 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
CDH12-208ENST00000522262 ABCC9O60706 1549 aa14.01□□□□□ -0.17
CDH12-208ENST00000522262 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
CDH12-208ENST00000522262 NACADO15069 1562 aa13.5□□□□□ -0.25
CDH12-208ENST00000522262 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
CDH12-208ENST00000522262 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
CDH12-208ENST00000522262 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
CDH12-208ENST00000522262 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
CDH12-208ENST00000522262 UNC13AQ9UPW8 1703 aa13.31□□□□□ -0.28
CDH12-208ENST00000522262 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
CDH12-208ENST00000522262 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
CDH12-208ENST00000522262 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
CDH12-208ENST00000522262 SHROOM4Q9ULL8 1493 aa12.98□□□□□ -0.33
CDH12-208ENST00000522262 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
CDH12-208ENST00000522262 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
CDH12-208ENST00000522262 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
CDH12-208ENST00000522262 CC2D2AQ9P2K1 1620 aa12.69□□□□□ -0.38
CDH12-208ENST00000522262 SMARCA4P51532 1647 aa12.64□□□□□ -0.39
CDH12-208ENST00000522262 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
CDH12-208ENST00000522262 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
CDH12-208ENST00000522262 ATAD2BQ9ULI0 1458 aa12.53□□□□□ -0.4
CDH12-208ENST00000522262 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.41
CDH12-208ENST00000522262 RSF1Q96T23 1441 aaPredicted RBP12.5□□□□□ -0.41
CDH12-208ENST00000522262 WIZO95785 1651 aa12.49□□□□□ -0.41
CDH12-208ENST00000522262 NCAPD3P42695 1498 aa12.47□□□□□ -0.41
CDH12-208ENST00000522262 SMARCA2P51531 1590 aa12.46□□□□□ -0.41
CDH12-208ENST00000522262 HMGXB3Q12766 1538 aa12.43□□□□□ -0.42
CDH12-208ENST00000522262 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
CDH12-208ENST00000522262 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
CDH12-208ENST00000522262 SUPT5HO00267 1087 aaKnown RBP12.22□□□□□ -0.45
CDH12-208ENST00000522262 NESP48681 1621 aa12.21□□□□□ -0.45
CDH12-208ENST00000522262 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
CDH12-208ENST00000522262 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
CDH12-208ENST00000522262 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
CDH12-208ENST00000522262 CFTRP13569 1480 aa12.09□□□□□ -0.47
CDH12-208ENST00000522262 KIF21AQ7Z4S6 1674 aa12.06□□□□□ -0.48
CDH12-208ENST00000522262 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
CDH12-208ENST00000522262 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
CDH12-208ENST00000522262 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
CDH12-208ENST00000522262 FANCD2Q9BXW9 1451 aa11.98□□□□□ -0.49
CDH12-208ENST00000522262 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
CDH12-208ENST00000522262 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
CDH12-208ENST00000522262 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
CDH12-208ENST00000522262 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
CDH12-208ENST00000522262 WDR62O43379 1518 aa11.89□□□□□ -0.51
CDH12-208ENST00000522262 CUX2O14529 1486 aa11.83□□□□□ -0.52
CDH12-208ENST00000522262 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
CDH12-208ENST00000522262 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
CDH12-208ENST00000522262 CUX1P39880 1505 aa11.82□□□□□ -0.52
CDH12-208ENST00000522262 DNMBPQ6XZF7 1577 aa11.81□□□□□ -0.52
CDH12-208ENST00000522262 SYNJ1O43426 1573 aa11.78□□□□□ -0.52
CDH12-208ENST00000522262 POLA1P09884 1462 aaPredicted RBP11.75□□□□□ -0.53
CDH12-208ENST00000522262 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
CDH12-208ENST00000522262 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
CDH12-208ENST00000522262 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
CDH12-208ENST00000522262 TARBP1Q13395 1621 aaKnown RBP11.72□□□□□ -0.53
CDH12-208ENST00000522262 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
CDH12-208ENST00000522262 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
CDH12-208ENST00000522262 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
CDH12-208ENST00000522262 WDR97A6NE52 1622 aa11.67□□□□□ -0.54
CDH12-208ENST00000522262 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
CDH12-208ENST00000522262 SOGA1O94964 1423 aa11.64□□□□□ -0.55
CDH12-208ENST00000522262 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
CDH12-208ENST00000522262 AQRO60306 1485 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDH12-208ENST00000522262 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
CDH12-208ENST00000522262 TDRD9Q8NDG6 1382 aaKnown RBP11.6□□□□□ -0.55
CDH12-208ENST00000522262 ABCA5Q8WWZ7 1642 aa11.59□□□□□ -0.55
CDH12-208ENST00000522262 PBRM1Q86U86 1689 aa11.54□□□□□ -0.56
CDH12-208ENST00000522262 GAPVD1Q14C86 1478 aa11.52□□□□□ -0.56
CDH12-208ENST00000522262 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
CDH12-208ENST00000522262 CHIC1Q5VXU3 224 aa11.51□□□□□ -0.57
CDH12-208ENST00000522262 SNAPC4Q5SXM2 1469 aa11.5□□□□□ -0.57
CDH12-208ENST00000522262 GRIN2BQ13224 1484 aa11.49□□□□□ -0.57
CDH12-208ENST00000522262 TRIM41Q8WV44 630 aa11.49□□□□□ -0.57
CDH12-208ENST00000522262 CHD1O14646 1710 aa11.47□□□□□ -0.57
CDH12-208ENST00000522262 ADAMTS12P58397 1594 aa11.45□□□□□ -0.58
CDH12-208ENST00000522262 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
CDH12-208ENST00000522262 MAGI1Q96QZ7 1491 aaPredicted RBP11.45□□□□□ -0.58
CDH12-208ENST00000522262 IGF1RP08069 1367 aa11.44□□□□□ -0.58
CDH12-208ENST00000522262 KIF27Q86VH2 1401 aa11.43□□□□□ -0.58
CDH12-208ENST00000522262 SYNJ2O15056 1496 aa11.41□□□□□ -0.58
CDH12-208ENST00000522262 FHAD1B1AJZ9 1412 aa11.38□□□□□ -0.59
CDH12-208ENST00000522262 GRIN2AQ12879 1464 aa11.37□□□□□ -0.59
CDH12-208ENST00000522262 CEP170Q5SW79 1584 aa11.37□□□□□ -0.59
CDH12-208ENST00000522262 CUL7Q14999 1698 aa11.36□□□□□ -0.59
CDH12-208ENST00000522262 FBLN2P98095 1184 aa11.36□□□□□ -0.59
CDH12-208ENST00000522262 CLASP1Q7Z460 1538 aa11.35□□□□□ -0.59
CDH12-208ENST00000522262 CHMP7Q8WUX9 453 aaPredicted RBP11.34□□□□□ -0.59
CDH12-208ENST00000522262 CARMIL1Q5VZK9 1371 aa11.33□□□□□ -0.6
CDH12-208ENST00000522262 NUP160Q12769 1436 aa11.33□□□□□ -0.6
CDH12-208ENST00000522262 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
CDH12-208ENST00000522262 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
CDH12-208ENST00000522262 PRXQ9BXM0 1461 aa11.32□□□□□ -0.6
CDH12-208ENST00000522262 FAM9AQ8IZU1 332 aaPredicted RBP11.3□□□□□ -0.6
CDH12-208ENST00000522262 RAPGEF2Q9Y4G8 1499 aa11.28□□□□□ -0.6
CDH12-208ENST00000522262 EEA1Q15075 1411 aa11.27□□□□□ -0.61
CDH12-208ENST00000522262 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
CDH12-208ENST00000522262 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
CDH12-208ENST00000522262 SHROOM2Q13796 1616 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms