RNA–Protein interactions for RNA: ENST00000522196.1

VIRMA-206, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 2

Gene VIRMA, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-206ENST00000522196 NISCHQ9Y2I1 1504 aa32.03■■■□□ 2.72
VIRMA-206ENST00000522196 CCDC180Q9P1Z9 1646 aa28.54■■■□□ 2.16
VIRMA-206ENST00000522196 ABCC9O60706 1549 aa28.36■■■□□ 2.13
VIRMA-206ENST00000522196 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
VIRMA-206ENST00000522196 RB1CC1Q8TDY2 1594 aa27.11■■□□□ 1.93
VIRMA-206ENST00000522196 NACADO15069 1562 aa26.97■■□□□ 1.91
VIRMA-206ENST00000522196 MYO15BQ96JP2 1530 aa26.65■■□□□ 1.86
VIRMA-206ENST00000522196 ZCCHC6Q5VYS8 1495 aaKnown RBP26.57■■□□□ 1.84
VIRMA-206ENST00000522196 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.84
VIRMA-206ENST00000522196 DCAF1Q9Y4B6 1507 aa26.43■■□□□ 1.82
VIRMA-206ENST00000522196 UNC13AQ9UPW8 1703 aa26.35■■□□□ 1.81
VIRMA-206ENST00000522196 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
VIRMA-206ENST00000522196 BICRAQ9NZM4 1560 aa26.19■■□□□ 1.78
VIRMA-206ENST00000522196 SCRIBQ14160 1630 aa26.12■■□□□ 1.77
VIRMA-206ENST00000522196 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
VIRMA-206ENST00000522196 EIF4G1Q04637 1599 aaKnown RBP25.59■■□□□ 1.69
VIRMA-206ENST00000522196 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
VIRMA-206ENST00000522196 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
VIRMA-206ENST00000522196 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
VIRMA-206ENST00000522196 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
VIRMA-206ENST00000522196 ATAD2BQ9ULI0 1458 aa24.87■■□□□ 1.57
VIRMA-206ENST00000522196 BAZ1AQ9NRL2 1556 aaPredicted RBP24.87■■□□□ 1.57
VIRMA-206ENST00000522196 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
VIRMA-206ENST00000522196 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
VIRMA-206ENST00000522196 BAZ1BQ9UIG0 1483 aaKnown RBP24.7■■□□□ 1.55
VIRMA-206ENST00000522196 MROH2BQ7Z745 1585 aa24.68■■□□□ 1.54
VIRMA-206ENST00000522196 PEG3Q9GZU2 1588 aa24.59■■□□□ 1.53
VIRMA-206ENST00000522196 ERCC6Q03468 1493 aa24.54■■□□□ 1.52
VIRMA-206ENST00000522196 NESP48681 1621 aa24.4■■□□□ 1.5
VIRMA-206ENST00000522196 WIZO95785 1651 aa24.4■■□□□ 1.5
VIRMA-206ENST00000522196 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
VIRMA-206ENST00000522196 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
VIRMA-206ENST00000522196 CUX2O14529 1486 aa24.27■■□□□ 1.48
VIRMA-206ENST00000522196 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
VIRMA-206ENST00000522196 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
VIRMA-206ENST00000522196 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
VIRMA-206ENST00000522196 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
VIRMA-206ENST00000522196 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
VIRMA-206ENST00000522196 CFTRP13569 1480 aa23.94■■□□□ 1.42
VIRMA-206ENST00000522196 DNAJC5Q9H3Z4 198 aa23.94■■□□□ 1.42
VIRMA-206ENST00000522196 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
VIRMA-206ENST00000522196 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
VIRMA-206ENST00000522196 FANCD2Q9BXW9 1451 aa23.93■■□□□ 1.42
VIRMA-206ENST00000522196 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
VIRMA-206ENST00000522196 WDR62O43379 1518 aa23.8■■□□□ 1.4
VIRMA-206ENST00000522196 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
VIRMA-206ENST00000522196 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
VIRMA-206ENST00000522196 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
VIRMA-206ENST00000522196 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
VIRMA-206ENST00000522196 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
VIRMA-206ENST00000522196 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
VIRMA-206ENST00000522196 DNMBPQ6XZF7 1577 aa23.41■■□□□ 1.34
VIRMA-206ENST00000522196 OSCARQ8IYS5 282 aa23.35■■□□□ 1.33
VIRMA-206ENST00000522196 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.32
VIRMA-206ENST00000522196 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
VIRMA-206ENST00000522196 SOGA1O94964 1423 aa23.24■■□□□ 1.31
VIRMA-206ENST00000522196 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.31
VIRMA-206ENST00000522196 RAD54L2Q9Y4B4 1467 aa23.19■■□□□ 1.3
VIRMA-206ENST00000522196 AEBP2Q6ZN18 517 aaPredicted RBP23.19■■□□□ 1.3
VIRMA-206ENST00000522196 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
VIRMA-206ENST00000522196 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
VIRMA-206ENST00000522196 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
VIRMA-206ENST00000522196 CUX1P39880 1505 aa23.17■■□□□ 1.3
VIRMA-206ENST00000522196 FBLN2P98095 1184 aa23.16■■□□□ 1.3
VIRMA-206ENST00000522196 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
VIRMA-206ENST00000522196 TDRD9Q8NDG6 1382 aaKnown RBP23.15■■□□□ 1.3
VIRMA-206ENST00000522196 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
VIRMA-206ENST00000522196 WDR97A6NE52 1622 aa23■■□□□ 1.27
VIRMA-206ENST00000522196 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
VIRMA-206ENST00000522196 GRIN2BQ13224 1484 aa22.97■■□□□ 1.27
VIRMA-206ENST00000522196 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
VIRMA-206ENST00000522196 CHD1O14646 1710 aa22.94■■□□□ 1.26
VIRMA-206ENST00000522196 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
VIRMA-206ENST00000522196 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
VIRMA-206ENST00000522196 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
VIRMA-206ENST00000522196 TOP2BQ02880 1626 aa22.89■■□□□ 1.25
VIRMA-206ENST00000522196 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
VIRMA-206ENST00000522196 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
VIRMA-206ENST00000522196 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
VIRMA-206ENST00000522196 BIVM-ERCC5R4GMW8 1640 aa22.86■■□□□ 1.25
VIRMA-206ENST00000522196 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
VIRMA-206ENST00000522196 SYNJ2O15056 1496 aa22.84■■□□□ 1.25
VIRMA-206ENST00000522196 ARHGEF11O15085 1522 aa22.83■■□□□ 1.25
VIRMA-206ENST00000522196 PBRM1Q86U86 1689 aa22.81■■□□□ 1.24
VIRMA-206ENST00000522196 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
VIRMA-206ENST00000522196 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
VIRMA-206ENST00000522196 CLASP1Q7Z460 1538 aa22.67■■□□□ 1.22
VIRMA-206ENST00000522196 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
VIRMA-206ENST00000522196 GRIN2AQ12879 1464 aa22.65■■□□□ 1.22
VIRMA-206ENST00000522196 ERICH3Q5RHP9 1530 aa22.63■■□□□ 1.21
VIRMA-206ENST00000522196 ADAMTS12P58397 1594 aa22.62■■□□□ 1.21
VIRMA-206ENST00000522196 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
VIRMA-206ENST00000522196 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
VIRMA-206ENST00000522196 TRHP20396 242 aaPredicted RBP22.53■■□□□ 1.2
VIRMA-206ENST00000522196 NUP160Q12769 1436 aa22.51■■□□□ 1.19
VIRMA-206ENST00000522196 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
VIRMA-206ENST00000522196 IGF1RP08069 1367 aa22.46■■□□□ 1.19
VIRMA-206ENST00000522196 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
VIRMA-206ENST00000522196 CUL7Q14999 1698 aa22.37■■□□□ 1.17
VIRMA-206ENST00000522196 PRG4Q92954 1404 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms