RNA–Protein interactions for RNA: ENST00000522182.1

RNF19A-209, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RNF19A, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-209ENST00000522182 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
RNF19A-209ENST00000522182 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.55
RNF19A-209ENST00000522182 ABCC9O60706 1549 aa18.18■□□□□ 0.5
RNF19A-209ENST00000522182 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
RNF19A-209ENST00000522182 RB1CC1Q8TDY2 1594 aa17.42■□□□□ 0.38
RNF19A-209ENST00000522182 NACADO15069 1562 aa17.38■□□□□ 0.37
RNF19A-209ENST00000522182 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
RNF19A-209ENST00000522182 DCAF8L2P0C7V8 631 aa17.29■□□□□ 0.36
RNF19A-209ENST00000522182 MYO15BQ96JP2 1530 aa17.26■□□□□ 0.35
RNF19A-209ENST00000522182 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
RNF19A-209ENST00000522182 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
RNF19A-209ENST00000522182 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
RNF19A-209ENST00000522182 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
RNF19A-209ENST00000522182 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
RNF19A-209ENST00000522182 SHROOM4Q9ULL8 1493 aa16.69■□□□□ 0.26
RNF19A-209ENST00000522182 DNAJC5Q9H3Z4 198 aa16.67■□□□□ 0.26
RNF19A-209ENST00000522182 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
RNF19A-209ENST00000522182 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
RNF19A-209ENST00000522182 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
RNF19A-209ENST00000522182 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
RNF19A-209ENST00000522182 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
RNF19A-209ENST00000522182 ATAD2BQ9ULI0 1458 aa16.07■□□□□ 0.16
RNF19A-209ENST00000522182 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
RNF19A-209ENST00000522182 NCAPD3P42695 1498 aa16.04■□□□□ 0.16
RNF19A-209ENST00000522182 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
RNF19A-209ENST00000522182 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
RNF19A-209ENST00000522182 HMGXB3Q12766 1538 aa15.99■□□□□ 0.15
RNF19A-209ENST00000522182 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
RNF19A-209ENST00000522182 WIZO95785 1651 aa15.89■□□□□ 0.13
RNF19A-209ENST00000522182 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
RNF19A-209ENST00000522182 CUX2O14529 1486 aa15.75■□□□□ 0.11
RNF19A-209ENST00000522182 NESP48681 1621 aa15.75■□□□□ 0.11
RNF19A-209ENST00000522182 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
RNF19A-209ENST00000522182 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
RNF19A-209ENST00000522182 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
RNF19A-209ENST00000522182 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
RNF19A-209ENST00000522182 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
RNF19A-209ENST00000522182 CADPSQ9ULU8 1353 aa15.56■□□□□ 0.08
RNF19A-209ENST00000522182 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
RNF19A-209ENST00000522182 CCDC88BA6NC98 1476 aa15.49■□□□□ 0.07
RNF19A-209ENST00000522182 CFTRP13569 1480 aa15.48■□□□□ 0.07
RNF19A-209ENST00000522182 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
RNF19A-209ENST00000522182 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
RNF19A-209ENST00000522182 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
RNF19A-209ENST00000522182 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
RNF19A-209ENST00000522182 CEP164Q9UPV0 1460 aa15.38■□□□□ 0.05
RNF19A-209ENST00000522182 WDR62O43379 1518 aa15.36■□□□□ 0.05
RNF19A-209ENST00000522182 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
RNF19A-209ENST00000522182 URB2Q14146 1524 aaKnown RBP15.3■□□□□ 0.04
RNF19A-209ENST00000522182 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
RNF19A-209ENST00000522182 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
RNF19A-209ENST00000522182 ABCC8Q09428 1581 aa15.07■□□□□ 0
RNF19A-209ENST00000522182 CUX1P39880 1505 aa15.06■□□□□ 0
RNF19A-209ENST00000522182 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
RNF19A-209ENST00000522182 IFT140Q96RY7 1462 aa15.05■□□□□ -0
RNF19A-209ENST00000522182 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
RNF19A-209ENST00000522182 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
RNF19A-209ENST00000522182 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
RNF19A-209ENST00000522182 FGD5Q6ZNL6 1462 aa14.99□□□□□ -0.01
RNF19A-209ENST00000522182 RAD54L2Q9Y4B4 1467 aa14.99□□□□□ -0.01
RNF19A-209ENST00000522182 WDR97A6NE52 1622 aa14.93□□□□□ -0.02
RNF19A-209ENST00000522182 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.022e-14■■■■■ 28.7
RNF19A-209ENST00000522182 SOGA1O94964 1423 aa14.92□□□□□ -0.02
RNF19A-209ENST00000522182 RIMBP3CA6NJZ7 1639 aa14.92□□□□□ -0.02
RNF19A-209ENST00000522182 RIMBP3BA6NNM3 1639 aa14.92□□□□□ -0.02
RNF19A-209ENST00000522182 RIMBP3Q9UFD9 1639 aa14.92□□□□□ -0.02
RNF19A-209ENST00000522182 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
RNF19A-209ENST00000522182 BIVM-ERCC5R4GMW8 1640 aa14.91□□□□□ -0.02
RNF19A-209ENST00000522182 TOP2BQ02880 1626 aa14.88□□□□□ -0.03
RNF19A-209ENST00000522182 TDRD9Q8NDG6 1382 aaKnown RBP14.87□□□□□ -0.03
RNF19A-209ENST00000522182 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
RNF19A-209ENST00000522182 CHD1O14646 1710 aa14.83□□□□□ -0.03
RNF19A-209ENST00000522182 ABCA10Q8WWZ4 1543 aa14.83□□□□□ -0.04
RNF19A-209ENST00000522182 ABCA5Q8WWZ7 1642 aa14.82□□□□□ -0.04
RNF19A-209ENST00000522182 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
RNF19A-209ENST00000522182 SNAPC4Q5SXM2 1469 aa14.79□□□□□ -0.04
RNF19A-209ENST00000522182 OSCARQ8IYS5 282 aa14.78□□□□□ -0.04
RNF19A-209ENST00000522182 GRIN2BQ13224 1484 aa14.77□□□□□ -0.04
RNF19A-209ENST00000522182 AEBP2Q6ZN18 517 aaPredicted RBP14.77□□□□□ -0.05
RNF19A-209ENST00000522182 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
RNF19A-209ENST00000522182 MAGI1Q96QZ7 1491 aaPredicted RBP14.74□□□□□ -0.05
RNF19A-209ENST00000522182 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
RNF19A-209ENST00000522182 SYNJ2O15056 1496 aa14.69□□□□□ -0.06
RNF19A-209ENST00000522182 FBLN2P98095 1184 aa14.68□□□□□ -0.06
RNF19A-209ENST00000522182 ADAMTS12P58397 1594 aa14.67□□□□□ -0.06
RNF19A-209ENST00000522182 CLASP1Q7Z460 1538 aa14.66□□□□□ -0.06
RNF19A-209ENST00000522182 ERICH3Q5RHP9 1530 aa14.64□□□□□ -0.07
RNF19A-209ENST00000522182 CHMP7Q8WUX9 453 aaPredicted RBP14.62□□□□□ -0.07
RNF19A-209ENST00000522182 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
RNF19A-209ENST00000522182 GRIN2AQ12879 1464 aa14.6□□□□□ -0.07
RNF19A-209ENST00000522182 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.07
RNF19A-209ENST00000522182 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
RNF19A-209ENST00000522182 NUP160Q12769 1436 aa14.55□□□□□ -0.08
RNF19A-209ENST00000522182 ARAP1Q96P48 1450 aa14.54□□□□□ -0.08
RNF19A-209ENST00000522182 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
RNF19A-209ENST00000522182 IGF1RP08069 1367 aa14.53□□□□□ -0.08
RNF19A-209ENST00000522182 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
RNF19A-209ENST00000522182 CUL7Q14999 1698 aa14.5□□□□□ -0.09
RNF19A-209ENST00000522182 RUSC2Q8N2Y8 1516 aa14.5□□□□□ -0.09
RNF19A-209ENST00000522182 ERCC6L2Q5T890 1561 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms