RNA–Protein interactions for RNA: ENST00000521767.1

UBR5-211, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

TSL 3

Gene UBR5, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-211ENST00000521767 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
UBR5-211ENST00000521767 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.9
UBR5-211ENST00000521767 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
UBR5-211ENST00000521767 ABCC9O60706 1549 aa25.57■■□□□ 1.68
UBR5-211ENST00000521767 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
UBR5-211ENST00000521767 DCAF1Q9Y4B6 1507 aa25.43■■□□□ 1.66
UBR5-211ENST00000521767 MYO15BQ96JP2 1530 aa25.19■■□□□ 1.62
UBR5-211ENST00000521767 NACADO15069 1562 aa25.1■■□□□ 1.61
UBR5-211ENST00000521767 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
UBR5-211ENST00000521767 RB1CC1Q8TDY2 1594 aa24.92■■□□□ 1.58
UBR5-211ENST00000521767 SCRIBQ14160 1630 aa24.69■■□□□ 1.54
UBR5-211ENST00000521767 UNC13AQ9UPW8 1703 aa24.44■■□□□ 1.5
UBR5-211ENST00000521767 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
UBR5-211ENST00000521767 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.45
UBR5-211ENST00000521767 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
UBR5-211ENST00000521767 CECR2Q9BXF3 1484 aa23.89■■□□□ 1.42
UBR5-211ENST00000521767 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
UBR5-211ENST00000521767 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
UBR5-211ENST00000521767 MROH2BQ7Z745 1585 aa23.74■■□□□ 1.39
UBR5-211ENST00000521767 SMARCA4P51532 1647 aa23.67■■□□□ 1.38
UBR5-211ENST00000521767 WIZO95785 1651 aa23.54■■□□□ 1.36
UBR5-211ENST00000521767 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
UBR5-211ENST00000521767 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.33
UBR5-211ENST00000521767 ATAD2BQ9ULI0 1458 aa23.32■■□□□ 1.32
UBR5-211ENST00000521767 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
UBR5-211ENST00000521767 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
UBR5-211ENST00000521767 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
UBR5-211ENST00000521767 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
UBR5-211ENST00000521767 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
UBR5-211ENST00000521767 HMGXB3Q12766 1538 aa23.1■■□□□ 1.29
UBR5-211ENST00000521767 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
UBR5-211ENST00000521767 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.24
UBR5-211ENST00000521767 DNAJC5BQ9UF47 199 aa22.74■■□□□ 1.23
UBR5-211ENST00000521767 CFTRP13569 1480 aa22.59■■□□□ 1.21
UBR5-211ENST00000521767 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
UBR5-211ENST00000521767 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
UBR5-211ENST00000521767 PRDM2Q13029 1718 aa22.5■■□□□ 1.19
UBR5-211ENST00000521767 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
UBR5-211ENST00000521767 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
UBR5-211ENST00000521767 LAMC3Q9Y6N6 1575 aa22.4■■□□□ 1.18
UBR5-211ENST00000521767 NESP48681 1621 aa22.4■■□□□ 1.18
UBR5-211ENST00000521767 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
UBR5-211ENST00000521767 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
UBR5-211ENST00000521767 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
UBR5-211ENST00000521767 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
UBR5-211ENST00000521767 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
UBR5-211ENST00000521767 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
UBR5-211ENST00000521767 CUX1P39880 1505 aa22.21■■□□□ 1.15
UBR5-211ENST00000521767 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
UBR5-211ENST00000521767 KIF21AQ7Z4S6 1674 aa22.14■■□□□ 1.14
UBR5-211ENST00000521767 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
UBR5-211ENST00000521767 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
UBR5-211ENST00000521767 SOGA1O94964 1423 aa22.04■■□□□ 1.12
UBR5-211ENST00000521767 TOPBP1Q92547 1522 aa22.03■■□□□ 1.12
UBR5-211ENST00000521767 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
UBR5-211ENST00000521767 FGD5Q6ZNL6 1462 aa21.99■■□□□ 1.11
UBR5-211ENST00000521767 EEA1Q15075 1411 aa21.98■■□□□ 1.11
UBR5-211ENST00000521767 RUSC2Q8N2Y8 1516 aa21.98■■□□□ 1.11
UBR5-211ENST00000521767 LOC105371045A0A1W2PR82 267 aa21.95■■□□□ 1.1
UBR5-211ENST00000521767 ERCC6Q03468 1493 aa21.94■■□□□ 1.1
UBR5-211ENST00000521767 MRC2Q9UBG0 1479 aa21.94■■□□□ 1.1
UBR5-211ENST00000521767 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
UBR5-211ENST00000521767 POLA1P09884 1462 aaPredicted RBP21.91■■□□□ 1.1
UBR5-211ENST00000521767 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
UBR5-211ENST00000521767 RAD54L2Q9Y4B4 1467 aa21.84■■□□□ 1.09
UBR5-211ENST00000521767 WDR62O43379 1518 aa21.83■■□□□ 1.09
UBR5-211ENST00000521767 CUX2O14529 1486 aa21.81■■□□□ 1.08
UBR5-211ENST00000521767 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
UBR5-211ENST00000521767 THOC2Q8NI27 1593 aaKnown RBP21.8■■□□□ 1.08
UBR5-211ENST00000521767 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
UBR5-211ENST00000521767 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
UBR5-211ENST00000521767 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
UBR5-211ENST00000521767 KIF21BO75037 1637 aa21.7■■□□□ 1.06
UBR5-211ENST00000521767 IGF1RP08069 1367 aa21.68■■□□□ 1.06
UBR5-211ENST00000521767 GOLGA3Q08378 1498 aa21.66■■□□□ 1.06
UBR5-211ENST00000521767 IFT140Q96RY7 1462 aa21.66■■□□□ 1.06
UBR5-211ENST00000521767 TDRD9Q8NDG6 1382 aaKnown RBP21.65■■□□□ 1.06
UBR5-211ENST00000521767 PRXQ9BXM0 1461 aa21.65■■□□□ 1.06
UBR5-211ENST00000521767 ABCA5Q8WWZ7 1642 aa21.63■■□□□ 1.05
UBR5-211ENST00000521767 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
UBR5-211ENST00000521767 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
UBR5-211ENST00000521767 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
UBR5-211ENST00000521767 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
UBR5-211ENST00000521767 TNIKQ9UKE5 1360 aa21.57■■□□□ 1.04
UBR5-211ENST00000521767 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
UBR5-211ENST00000521767 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.04
UBR5-211ENST00000521767 ZNF608Q9ULD9 1512 aaPredicted RBP21.54■■□□□ 1.04
UBR5-211ENST00000521767 CUL7Q14999 1698 aa21.52■■□□□ 1.03
UBR5-211ENST00000521767 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
UBR5-211ENST00000521767 GRIN2BQ13224 1484 aa21.46■■□□□ 1.03
UBR5-211ENST00000521767 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
UBR5-211ENST00000521767 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
UBR5-211ENST00000521767 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
UBR5-211ENST00000521767 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
UBR5-211ENST00000521767 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
UBR5-211ENST00000521767 CLIP1P30622 1438 aa21.31■■□□□ 1
UBR5-211ENST00000521767 MAGI1Q96QZ7 1491 aaPredicted RBP21.3■■□□□ 1
UBR5-211ENST00000521767 RANGAP1P46060 587 aaPredicted RBP21.28■■□□□ 1
UBR5-211ENST00000521767 CTTNBP2Q8WZ74 1663 aa21.26■□□□□ 0.99
UBR5-211ENST00000521767 SYNJ2O15056 1496 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms