RNA–Protein interactions for RNA: ENST00000521705.1

IGKV1-13-201, Transcript of immunoglobulin kappa variable 1-13 (gene/pseudogene), humanhuman

BASIC

Gene IGKV1-13, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-13-201ENST00000521705 NISCHQ9Y2I1 1504 aa27.57■■■□□ 2
IGKV1-13-201ENST00000521705 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
IGKV1-13-201ENST00000521705 ABCC9O60706 1549 aa24.01■■□□□ 1.43
IGKV1-13-201ENST00000521705 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
IGKV1-13-201ENST00000521705 NACADO15069 1562 aa23.12■■□□□ 1.29
IGKV1-13-201ENST00000521705 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
IGKV1-13-201ENST00000521705 MYO15BQ96JP2 1530 aa23.04■■□□□ 1.28
IGKV1-13-201ENST00000521705 ZCCHC6Q5VYS8 1495 aaKnown RBP22.9■■□□□ 1.26
IGKV1-13-201ENST00000521705 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
IGKV1-13-201ENST00000521705 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
IGKV1-13-201ENST00000521705 UNC13AQ9UPW8 1703 aa22.36■■□□□ 1.17
IGKV1-13-201ENST00000521705 BICRAQ9NZM4 1560 aa22.34■■□□□ 1.17
IGKV1-13-201ENST00000521705 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
IGKV1-13-201ENST00000521705 SCRIBQ14160 1630 aa22.21■■□□□ 1.15
IGKV1-13-201ENST00000521705 DNAJC5BQ9UF47 199 aa22.2■■□□□ 1.14
IGKV1-13-201ENST00000521705 EIF4G1Q04637 1599 aaKnown RBP21.79■■□□□ 1.08
IGKV1-13-201ENST00000521705 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
IGKV1-13-201ENST00000521705 CECR2Q9BXF3 1484 aa21.64■■□□□ 1.06
IGKV1-13-201ENST00000521705 NCAPD3P42695 1498 aa21.39■■□□□ 1.02
IGKV1-13-201ENST00000521705 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
IGKV1-13-201ENST00000521705 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
IGKV1-13-201ENST00000521705 SMARCA4P51532 1647 aa21.31■■□□□ 1
IGKV1-13-201ENST00000521705 SMARCA2P51531 1590 aa21.29■■□□□ 1
IGKV1-13-201ENST00000521705 PEG3Q9GZU2 1588 aa21.19■□□□□ 0.98
IGKV1-13-201ENST00000521705 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
IGKV1-13-201ENST00000521705 MROH2BQ7Z745 1585 aa21.18■□□□□ 0.98
IGKV1-13-201ENST00000521705 BAZ1BQ9UIG0 1483 aaKnown RBP21.12■□□□□ 0.97
IGKV1-13-201ENST00000521705 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
IGKV1-13-201ENST00000521705 WIZO95785 1651 aa20.86■□□□□ 0.93
IGKV1-13-201ENST00000521705 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
IGKV1-13-201ENST00000521705 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
IGKV1-13-201ENST00000521705 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
IGKV1-13-201ENST00000521705 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
IGKV1-13-201ENST00000521705 NESP48681 1621 aa20.72■□□□□ 0.91
IGKV1-13-201ENST00000521705 TOP2AP11388 1531 aaKnown RBP20.72■□□□□ 0.91
IGKV1-13-201ENST00000521705 CUX2O14529 1486 aa20.62■□□□□ 0.89
IGKV1-13-201ENST00000521705 CFTRP13569 1480 aa20.59■□□□□ 0.89
IGKV1-13-201ENST00000521705 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
IGKV1-13-201ENST00000521705 FANCD2Q9BXW9 1451 aa20.44■□□□□ 0.86
IGKV1-13-201ENST00000521705 CEP164Q9UPV0 1460 aa20.41■□□□□ 0.86
IGKV1-13-201ENST00000521705 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
IGKV1-13-201ENST00000521705 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
IGKV1-13-201ENST00000521705 KIF21AQ7Z4S6 1674 aa20.38■□□□□ 0.85
IGKV1-13-201ENST00000521705 THOC2Q8NI27 1593 aaKnown RBP20.38■□□□□ 0.85
IGKV1-13-201ENST00000521705 WDR62O43379 1518 aa20.3■□□□□ 0.84
IGKV1-13-201ENST00000521705 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
IGKV1-13-201ENST00000521705 URB2Q14146 1524 aaKnown RBP20.19■□□□□ 0.82
IGKV1-13-201ENST00000521705 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
IGKV1-13-201ENST00000521705 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
IGKV1-13-201ENST00000521705 TOPBP1Q92547 1522 aa20.08■□□□□ 0.81
IGKV1-13-201ENST00000521705 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
IGKV1-13-201ENST00000521705 DNMBPQ6XZF7 1577 aa20.03■□□□□ 0.8
IGKV1-13-201ENST00000521705 SOGA1O94964 1423 aa19.92■□□□□ 0.78
IGKV1-13-201ENST00000521705 POLA1P09884 1462 aaPredicted RBP19.91■□□□□ 0.78
IGKV1-13-201ENST00000521705 OSCARQ8IYS5 282 aa19.88■□□□□ 0.77
IGKV1-13-201ENST00000521705 CUX1P39880 1505 aa19.86■□□□□ 0.77
IGKV1-13-201ENST00000521705 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
IGKV1-13-201ENST00000521705 FGD5Q6ZNL6 1462 aa19.83■□□□□ 0.76
IGKV1-13-201ENST00000521705 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
IGKV1-13-201ENST00000521705 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
IGKV1-13-201ENST00000521705 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
IGKV1-13-201ENST00000521705 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.76
IGKV1-13-201ENST00000521705 TDRD9Q8NDG6 1382 aaKnown RBP19.77■□□□□ 0.76
IGKV1-13-201ENST00000521705 WDR97A6NE52 1622 aa19.76■□□□□ 0.75
IGKV1-13-201ENST00000521705 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
IGKV1-13-201ENST00000521705 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
IGKV1-13-201ENST00000521705 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
IGKV1-13-201ENST00000521705 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
IGKV1-13-201ENST00000521705 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
IGKV1-13-201ENST00000521705 BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
IGKV1-13-201ENST00000521705 FBLN2P98095 1184 aa19.63■□□□□ 0.73
IGKV1-13-201ENST00000521705 CHMP7Q8WUX9 453 aaPredicted RBP19.63■□□□□ 0.73
IGKV1-13-201ENST00000521705 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
IGKV1-13-201ENST00000521705 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
IGKV1-13-201ENST00000521705 SNAPC4Q5SXM2 1469 aa19.54■□□□□ 0.72
IGKV1-13-201ENST00000521705 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
IGKV1-13-201ENST00000521705 ABCA5Q8WWZ7 1642 aa19.5■□□□□ 0.71
IGKV1-13-201ENST00000521705 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
IGKV1-13-201ENST00000521705 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
IGKV1-13-201ENST00000521705 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
IGKV1-13-201ENST00000521705 CHD1O14646 1710 aa19.41■□□□□ 0.7
IGKV1-13-201ENST00000521705 IGF1RP08069 1367 aa19.4■□□□□ 0.7
IGKV1-13-201ENST00000521705 PBRM1Q86U86 1689 aa19.4■□□□□ 0.7
IGKV1-13-201ENST00000521705 TRIM41Q8WV44 630 aa19.37■□□□□ 0.69
IGKV1-13-201ENST00000521705 GRIN2AQ12879 1464 aa19.36■□□□□ 0.69
IGKV1-13-201ENST00000521705 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
IGKV1-13-201ENST00000521705 CLASP1Q7Z460 1538 aa19.32■□□□□ 0.68
IGKV1-13-201ENST00000521705 NUP160Q12769 1436 aa19.32■□□□□ 0.68
IGKV1-13-201ENST00000521705 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
IGKV1-13-201ENST00000521705 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
IGKV1-13-201ENST00000521705 RIMBP3CA6NJZ7 1639 aa19.29■□□□□ 0.68
IGKV1-13-201ENST00000521705 RIMBP3BA6NNM3 1639 aa19.29■□□□□ 0.68
IGKV1-13-201ENST00000521705 RIMBP3Q9UFD9 1639 aa19.29■□□□□ 0.68
IGKV1-13-201ENST00000521705 CARMIL1Q5VZK9 1371 aa19.26■□□□□ 0.67
IGKV1-13-201ENST00000521705 JPH4Q96JJ6 628 aa19.24■□□□□ 0.67
IGKV1-13-201ENST00000521705 CUL7Q14999 1698 aa19.19■□□□□ 0.66
IGKV1-13-201ENST00000521705 CEP170Q5SW79 1584 aa19.18■□□□□ 0.66
IGKV1-13-201ENST00000521705 ARAP1Q96P48 1450 aa19.16■□□□□ 0.66
IGKV1-13-201ENST00000521705 KIAA0586Q9BVV6 1533 aa19.15■□□□□ 0.66
IGKV1-13-201ENST00000521705 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms