RNA–Protein interactions for RNA: ENST00000521615.1

CLINT1-204, Transcript of clathrin interactor 1, humanhuman

TSL 3

Gene CLINT1, Length 399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-204ENST00000521615 NISCHQ9Y2I1 1504 aa12.74□□□□□ -0.37
CLINT1-204ENST00000521615 CCDC180Q9P1Z9 1646 aa11.27□□□□□ -0.6
CLINT1-204ENST00000521615 ZCCHC6Q5VYS8 1495 aaKnown RBP10.7□□□□□ -0.7
CLINT1-204ENST00000521615 CHIC1Q5VXU3 224 aa10.63□□□□□ -0.71
CLINT1-204ENST00000521615 ABCC9O60706 1549 aa10.61□□□□□ -0.71
CLINT1-204ENST00000521615 DCAF1Q9Y4B6 1507 aa10.58□□□□□ -0.72
CLINT1-204ENST00000521615 MYO15BQ96JP2 1530 aa10.49□□□□□ -0.73
CLINT1-204ENST00000521615 DCAF8L2P0C7V8 631 aa10.47□□□□□ -0.73
CLINT1-204ENST00000521615 NACADO15069 1562 aa10.47□□□□□ -0.73
CLINT1-204ENST00000521615 RB1CC1Q8TDY2 1594 aa10.42□□□□□ -0.74
CLINT1-204ENST00000521615 AEBP2Q6ZN18 517 aaPredicted RBP10.36□□□□□ -0.75
CLINT1-204ENST00000521615 SCRIBQ14160 1630 aa10.28□□□□□ -0.76
CLINT1-204ENST00000521615 SHROOM4Q9ULL8 1493 aa10.25□□□□□ -0.77
CLINT1-204ENST00000521615 UNC13AQ9UPW8 1703 aa10.21□□□□□ -0.77
CLINT1-204ENST00000521615 BICRAQ9NZM4 1560 aa10.03□□□□□ -0.8
CLINT1-204ENST00000521615 PABPN1Q86U42 306 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLINT1-204ENST00000521615 DNAJC5BQ9UF47 199 aa9.9□□□□□ -0.82
CLINT1-204ENST00000521615 BAZ1AQ9NRL2 1556 aaPredicted RBP9.89□□□□□ -0.83
CLINT1-204ENST00000521615 SMARCA4P51532 1647 aa9.85□□□□□ -0.83
CLINT1-204ENST00000521615 CECR2Q9BXF3 1484 aa9.85□□□□□ -0.83
CLINT1-204ENST00000521615 MROH2BQ7Z745 1585 aa9.81□□□□□ -0.84
CLINT1-204ENST00000521615 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
CLINT1-204ENST00000521615 RSF1Q96T23 1441 aaPredicted RBP9.8□□□□□ -0.84
CLINT1-204ENST00000521615 WIZO95785 1651 aa9.77□□□□□ -0.85
CLINT1-204ENST00000521615 EIF4G1Q04637 1599 aaKnown RBP9.76□□□□□ -0.85
CLINT1-204ENST00000521615 PEG3Q9GZU2 1588 aa9.74□□□□□ -0.85
CLINT1-204ENST00000521615 SMARCA2P51531 1590 aa9.73□□□□□ -0.85
CLINT1-204ENST00000521615 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
CLINT1-204ENST00000521615 ATAD2BQ9ULI0 1458 aa9.66□□□□□ -0.86
CLINT1-204ENST00000521615 HMGXB3Q12766 1538 aa9.65□□□□□ -0.86
CLINT1-204ENST00000521615 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.87
CLINT1-204ENST00000521615 CC2D2AQ9P2K1 1620 aa9.64□□□□□ -0.87
CLINT1-204ENST00000521615 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
CLINT1-204ENST00000521615 CCDC88BA6NC98 1476 aa9.53□□□□□ -0.88
CLINT1-204ENST00000521615 PHF23Q9BUL5 403 aaPredicted RBP9.5□□□□□ -0.89
CLINT1-204ENST00000521615 PRDM2Q13029 1718 aa9.46□□□□□ -0.89
CLINT1-204ENST00000521615 DNAJC5Q9H3Z4 198 aa9.44□□□□□ -0.9
CLINT1-204ENST00000521615 LAMC3Q9Y6N6 1575 aa9.37□□□□□ -0.91
CLINT1-204ENST00000521615 CFTRP13569 1480 aa9.36□□□□□ -0.91
CLINT1-204ENST00000521615 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
CLINT1-204ENST00000521615 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
CLINT1-204ENST00000521615 BIVM-ERCC5R4GMW8 1640 aa9.27□□□□□ -0.92
CLINT1-204ENST00000521615 TRIM41Q8WV44 630 aa9.27□□□□□ -0.93
CLINT1-204ENST00000521615 WRNQ14191 1432 aaPredicted RBP eCLIP9.27□□□□□ -0.93
CLINT1-204ENST00000521615 NESP48681 1621 aa9.27□□□□□ -0.93
CLINT1-204ENST00000521615 FANCD2Q9BXW9 1451 aa9.26□□□□□ -0.93
CLINT1-204ENST00000521615 KIF21AQ7Z4S6 1674 aa9.26□□□□□ -0.93
CLINT1-204ENST00000521615 TOP2BQ02880 1626 aa9.25□□□□□ -0.93
CLINT1-204ENST00000521615 SYNJ1O43426 1573 aa9.24□□□□□ -0.93
CLINT1-204ENST00000521615 PDS5BQ9NTI5 1447 aa9.24□□□□□ -0.93
CLINT1-204ENST00000521615 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
CLINT1-204ENST00000521615 DNMBPQ6XZF7 1577 aa9.2□□□□□ -0.94
CLINT1-204ENST00000521615 CUX1P39880 1505 aa9.2□□□□□ -0.94
CLINT1-204ENST00000521615 ERCC6Q03468 1493 aa9.15□□□□□ -0.94
CLINT1-204ENST00000521615 TOPBP1Q92547 1522 aa9.15□□□□□ -0.95
CLINT1-204ENST00000521615 MRC2Q9UBG0 1479 aa9.15□□□□□ -0.95
CLINT1-204ENST00000521615 URB2Q14146 1524 aaKnown RBP9.13□□□□□ -0.95
CLINT1-204ENST00000521615 FGD5Q6ZNL6 1462 aa9.13□□□□□ -0.95
CLINT1-204ENST00000521615 EEA1Q15075 1411 aa9.13□□□□□ -0.95
CLINT1-204ENST00000521615 THOC2Q8NI27 1593 aaKnown RBP9.12□□□□□ -0.95
CLINT1-204ENST00000521615 WDR62O43379 1518 aa9.11□□□□□ -0.95
CLINT1-204ENST00000521615 WDR97A6NE52 1622 aa9.09□□□□□ -0.95
CLINT1-204ENST00000521615 POLA1P09884 1462 aaPredicted RBP9.08□□□□□ -0.96
CLINT1-204ENST00000521615 SOGA1O94964 1423 aa9.07□□□□□ -0.96
CLINT1-204ENST00000521615 KIF27Q86VH2 1401 aa9.05□□□□□ -0.96
CLINT1-204ENST00000521615 ABCA10Q8WWZ4 1543 aa9.05□□□□□ -0.96
CLINT1-204ENST00000521615 FAM9AQ8IZU1 332 aaPredicted RBP9.05□□□□□ -0.96
CLINT1-204ENST00000521615 TARBP1Q13395 1621 aaKnown RBP9.05□□□□□ -0.96
CLINT1-204ENST00000521615 CUX2O14529 1486 aa9.03□□□□□ -0.96
CLINT1-204ENST00000521615 KIF21BO75037 1637 aa9.03□□□□□ -0.96
CLINT1-204ENST00000521615 RUSC2Q8N2Y8 1516 aa9.03□□□□□ -0.96
CLINT1-204ENST00000521615 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.96
CLINT1-204ENST00000521615 ABCA5Q8WWZ7 1642 aa9.02□□□□□ -0.96
CLINT1-204ENST00000521615 PBRM1Q86U86 1689 aa9.02□□□□□ -0.97
CLINT1-204ENST00000521615 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
CLINT1-204ENST00000521615 CUL7Q14999 1698 aa9□□□□□ -0.97
CLINT1-204ENST00000521615 CSRNP3Q8WYN3 585 aa9□□□□□ -0.97
CLINT1-204ENST00000521615 GOLGA3Q08378 1498 aa8.99□□□□□ -0.97
CLINT1-204ENST00000521615 ERICH3Q5RHP9 1530 aa8.99□□□□□ -0.97
CLINT1-204ENST00000521615 EIF4G3O43432 1585 aaKnown RBP8.97□□□□□ -0.97
CLINT1-204ENST00000521615 GAPVD1Q14C86 1478 aa8.96□□□□□ -0.97
CLINT1-204ENST00000521615 PRXQ9BXM0 1461 aa8.94□□□□□ -0.98
CLINT1-204ENST00000521615 CTTNBP2Q8WZ74 1663 aa8.92□□□□□ -0.98
CLINT1-204ENST00000521615 ADAMTS12P58397 1594 aa8.92□□□□□ -0.98
CLINT1-204ENST00000521615 GRIN2BQ13224 1484 aa8.92□□□□□ -0.98
CLINT1-204ENST00000521615 RAPGEF2Q9Y4G8 1499 aa8.92□□□□□ -0.98
CLINT1-204ENST00000521615 TDRD9Q8NDG6 1382 aaKnown RBP8.92□□□□□ -0.98
CLINT1-204ENST00000521615 LOC105371045A0A1W2PR82 267 aa8.92□□□□□ -0.98
CLINT1-204ENST00000521615 IGF1RP08069 1367 aa8.91□□□□□ -0.98
CLINT1-204ENST00000521615 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
CLINT1-204ENST00000521615 ZNF608Q9ULD9 1512 aaPredicted RBP8.9□□□□□ -0.98
CLINT1-204ENST00000521615 AQRO60306 1485 aaKnown RBP eCLIP8.89□□□□□ -0.992e-8■■□□□ 13.4
CLINT1-204ENST00000521615 CARMIL1Q5VZK9 1371 aa8.89□□□□□ -0.99
CLINT1-204ENST00000521615 TNIKQ9UKE5 1360 aa8.89□□□□□ -0.99
CLINT1-204ENST00000521615 UBTFP17480 764 aaKnown RBP8.89□□□□□ -0.99
CLINT1-204ENST00000521615 MAGI1Q96QZ7 1491 aaPredicted RBP8.88□□□□□ -0.99
CLINT1-204ENST00000521615 SNAPC4Q5SXM2 1469 aa8.87□□□□□ -0.99
CLINT1-204ENST00000521615 FHAD1B1AJZ9 1412 aa8.87□□□□□ -0.99
CLINT1-204ENST00000521615 PLPPR3Q6T4P5 718 aa8.86□□□□□ -0.99
CLINT1-204ENST00000521615 CEP162Q5TB80 1403 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms