RNA–Protein interactions for RNA: ENST00000521467.5

MSC-AS1-207, MSC antisense RNA 1, humanhuman

TSL 3

Gene MSC-AS1, Length 485 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-207ENST00000521467 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
MSC-AS1-207ENST00000521467 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
MSC-AS1-207ENST00000521467 ABCC9O60706 1549 aa17.39■□□□□ 0.37
MSC-AS1-207ENST00000521467 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
MSC-AS1-207ENST00000521467 NACADO15069 1562 aa16.78■□□□□ 0.28
MSC-AS1-207ENST00000521467 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
MSC-AS1-207ENST00000521467 MYO15BQ96JP2 1530 aa16.71■□□□□ 0.27
MSC-AS1-207ENST00000521467 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
MSC-AS1-207ENST00000521467 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
MSC-AS1-207ENST00000521467 UNC13AQ9UPW8 1703 aa16.29■□□□□ 0.2
MSC-AS1-207ENST00000521467 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
MSC-AS1-207ENST00000521467 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
MSC-AS1-207ENST00000521467 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
MSC-AS1-207ENST00000521467 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
MSC-AS1-207ENST00000521467 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
MSC-AS1-207ENST00000521467 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
MSC-AS1-207ENST00000521467 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
MSC-AS1-207ENST00000521467 CECR2Q9BXF3 1484 aa15.66■□□□□ 0.1
MSC-AS1-207ENST00000521467 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
MSC-AS1-207ENST00000521467 NCAPD3P42695 1498 aa15.51■□□□□ 0.07
MSC-AS1-207ENST00000521467 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
MSC-AS1-207ENST00000521467 ATAD2BQ9ULI0 1458 aa15.46■□□□□ 0.06
MSC-AS1-207ENST00000521467 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
MSC-AS1-207ENST00000521467 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
MSC-AS1-207ENST00000521467 MROH2BQ7Z745 1585 aa15.37■□□□□ 0.05
MSC-AS1-207ENST00000521467 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
MSC-AS1-207ENST00000521467 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
MSC-AS1-207ENST00000521467 RSF1Q96T23 1441 aaPredicted RBP15.24■□□□□ 0.03
MSC-AS1-207ENST00000521467 WIZO95785 1651 aa15.18■□□□□ 0.02
MSC-AS1-207ENST00000521467 SUPT5HO00267 1087 aaKnown RBP15.07■□□□□ 0
MSC-AS1-207ENST00000521467 LAMC3Q9Y6N6 1575 aa15.07■□□□□ 0
MSC-AS1-207ENST00000521467 CADPSQ9ULU8 1353 aa15.06■□□□□ 0
MSC-AS1-207ENST00000521467 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
MSC-AS1-207ENST00000521467 ERCC6Q03468 1493 aa15.02■□□□□ -0
MSC-AS1-207ENST00000521467 NESP48681 1621 aa15.02□□□□□ -0.01
MSC-AS1-207ENST00000521467 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
MSC-AS1-207ENST00000521467 CFTRP13569 1480 aa14.93□□□□□ -0.02
MSC-AS1-207ENST00000521467 CUX2O14529 1486 aa14.92□□□□□ -0.02
MSC-AS1-207ENST00000521467 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
MSC-AS1-207ENST00000521467 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
MSC-AS1-207ENST00000521467 KIF21AQ7Z4S6 1674 aa14.81□□□□□ -0.04
MSC-AS1-207ENST00000521467 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
MSC-AS1-207ENST00000521467 MRC2Q9UBG0 1479 aa14.78□□□□□ -0.04
MSC-AS1-207ENST00000521467 THOC2Q8NI27 1593 aaKnown RBP14.77□□□□□ -0.04
MSC-AS1-207ENST00000521467 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
MSC-AS1-207ENST00000521467 WDR62O43379 1518 aa14.71□□□□□ -0.05
MSC-AS1-207ENST00000521467 ABCC8Q09428 1581 aa14.68□□□□□ -0.06
MSC-AS1-207ENST00000521467 URB2Q14146 1524 aaKnown RBP14.64□□□□□ -0.07
MSC-AS1-207ENST00000521467 DNAJC5Q9H3Z4 198 aa14.58□□□□□ -0.08
MSC-AS1-207ENST00000521467 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
MSC-AS1-207ENST00000521467 DNMBPQ6XZF7 1577 aa14.54□□□□□ -0.08
MSC-AS1-207ENST00000521467 IFT140Q96RY7 1462 aa14.52□□□□□ -0.08
MSC-AS1-207ENST00000521467 SOGA1O94964 1423 aa14.45□□□□□ -0.1
MSC-AS1-207ENST00000521467 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
MSC-AS1-207ENST00000521467 CUX1P39880 1505 aa14.41□□□□□ -0.1
MSC-AS1-207ENST00000521467 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
MSC-AS1-207ENST00000521467 TARBP1Q13395 1621 aaKnown RBP14.39□□□□□ -0.11
MSC-AS1-207ENST00000521467 FGD5Q6ZNL6 1462 aa14.38□□□□□ -0.11
MSC-AS1-207ENST00000521467 ZNF608Q9ULD9 1512 aaPredicted RBP14.38□□□□□ -0.11
MSC-AS1-207ENST00000521467 CHIC1Q5VXU3 224 aa14.38□□□□□ -0.11
MSC-AS1-207ENST00000521467 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
MSC-AS1-207ENST00000521467 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
MSC-AS1-207ENST00000521467 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.11
MSC-AS1-207ENST00000521467 WDR97A6NE52 1622 aa14.34□□□□□ -0.11
MSC-AS1-207ENST00000521467 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
MSC-AS1-207ENST00000521467 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
MSC-AS1-207ENST00000521467 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
MSC-AS1-207ENST00000521467 ABCA10Q8WWZ4 1543 aa14.29□□□□□ -0.12
MSC-AS1-207ENST00000521467 EIF4G3O43432 1585 aaKnown RBP14.29□□□□□ -0.12
MSC-AS1-207ENST00000521467 GRIN2BQ13224 1484 aa14.25□□□□□ -0.13
MSC-AS1-207ENST00000521467 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
MSC-AS1-207ENST00000521467 SYNJ1O43426 1573 aa14.24□□□□□ -0.13
MSC-AS1-207ENST00000521467 FBLN2P98095 1184 aa14.23□□□□□ -0.13
MSC-AS1-207ENST00000521467 CHMP7Q8WUX9 453 aaPredicted RBP14.23□□□□□ -0.13
MSC-AS1-207ENST00000521467 MAGI1Q96QZ7 1491 aaPredicted RBP14.22□□□□□ -0.13
MSC-AS1-207ENST00000521467 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
MSC-AS1-207ENST00000521467 SNAPC4Q5SXM2 1469 aa14.17□□□□□ -0.14
MSC-AS1-207ENST00000521467 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
MSC-AS1-207ENST00000521467 SYNJ2O15056 1496 aa14.16□□□□□ -0.14
MSC-AS1-207ENST00000521467 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
MSC-AS1-207ENST00000521467 PBRM1Q86U86 1689 aa14.12□□□□□ -0.15
MSC-AS1-207ENST00000521467 CHD1O14646 1710 aa14.12□□□□□ -0.15
MSC-AS1-207ENST00000521467 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
MSC-AS1-207ENST00000521467 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
MSC-AS1-207ENST00000521467 IGF1RP08069 1367 aa14.08□□□□□ -0.16
MSC-AS1-207ENST00000521467 GRIN2AQ12879 1464 aa14.04□□□□□ -0.16
MSC-AS1-207ENST00000521467 ADAMTS12P58397 1594 aa14.01□□□□□ -0.17
MSC-AS1-207ENST00000521467 ARHGEF11O15085 1522 aa14□□□□□ -0.17
MSC-AS1-207ENST00000521467 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
MSC-AS1-207ENST00000521467 NUP160Q12769 1436 aa13.99□□□□□ -0.17
MSC-AS1-207ENST00000521467 RIMBP3CA6NJZ7 1639 aa13.99□□□□□ -0.17
MSC-AS1-207ENST00000521467 RIMBP3BA6NNM3 1639 aa13.99□□□□□ -0.17
MSC-AS1-207ENST00000521467 RIMBP3Q9UFD9 1639 aa13.99□□□□□ -0.17
MSC-AS1-207ENST00000521467 CARMIL1Q5VZK9 1371 aa13.98□□□□□ -0.17
MSC-AS1-207ENST00000521467 CYB5RLQ6IPT4 315 aa13.98□□□□□ -0.17
MSC-AS1-207ENST00000521467 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
MSC-AS1-207ENST00000521467 CUL7Q14999 1698 aa13.95□□□□□ -0.18
MSC-AS1-207ENST00000521467 CEP170Q5SW79 1584 aa13.92□□□□□ -0.18
MSC-AS1-207ENST00000521467 FAM9AQ8IZU1 332 aaPredicted RBP13.91□□□□□ -0.18
MSC-AS1-207ENST00000521467 KIAA0586Q9BVV6 1533 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms