RNA–Protein interactions for RNA: ENST00000521418.1

POLB-210, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-210ENST00000521418 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
POLB-210ENST00000521418 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
POLB-210ENST00000521418 NISCHQ9Y2I1 1504 aa16.31■□□□□ 0.2
POLB-210ENST00000521418 SENP3Q9H4L4 574 aaPredicted RBP16.02■□□□□ 0.16
POLB-210ENST00000521418 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
POLB-210ENST00000521418 ABCC9O60706 1549 aa15.26■□□□□ 0.03
POLB-210ENST00000521418 FOXD1Q16676 465 aa14.91□□□□□ -0.02
POLB-210ENST00000521418 CCDC180Q9P1Z9 1646 aa14.9□□□□□ -0.02
POLB-210ENST00000521418 DNAJC5BQ9UF47 199 aa14.58□□□□□ -0.08
POLB-210ENST00000521418 PLPPR3Q6T4P5 718 aa14.53□□□□□ -0.08
POLB-210ENST00000521418 RB1CC1Q8TDY2 1594 aa14.43□□□□□ -0.1
POLB-210ENST00000521418 NACADO15069 1562 aa14.21□□□□□ -0.14
POLB-210ENST00000521418 PPP6R1Q9UPN7 881 aa14.12□□□□□ -0.15
POLB-210ENST00000521418 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
POLB-210ENST00000521418 ADRA2BP18089 450 aa14.04□□□□□ -0.16
POLB-210ENST00000521418 DCAF8L2P0C7V8 631 aa14.02□□□□□ -0.17
POLB-210ENST00000521418 POTEDQ86YR6 584 aa14.01□□□□□ -0.17
POLB-210ENST00000521418 UNC13AQ9UPW8 1703 aa13.95□□□□□ -0.18
POLB-210ENST00000521418 PIAS4Q8N2W9 510 aaPredicted RBP13.92□□□□□ -0.18
POLB-210ENST00000521418 MSH5O43196 834 aa13.87□□□□□ -0.19
POLB-210ENST00000521418 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
POLB-210ENST00000521418 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
POLB-210ENST00000521418 MYO15BQ96JP2 1530 aa13.86□□□□□ -0.19
POLB-210ENST00000521418 CECR2Q9BXF3 1484 aa13.84□□□□□ -0.19
POLB-210ENST00000521418 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
POLB-210ENST00000521418 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.21
POLB-210ENST00000521418 EIF4G1Q04637 1599 aaKnown RBP13.64□□□□□ -0.23
POLB-210ENST00000521418 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
POLB-210ENST00000521418 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
POLB-210ENST00000521418 CUX2O14529 1486 aa13.44□□□□□ -0.26
POLB-210ENST00000521418 ZCCHC6Q5VYS8 1495 aaKnown RBP13.42□□□□□ -0.26
POLB-210ENST00000521418 ERCC6Q03468 1493 aa13.33□□□□□ -0.28
POLB-210ENST00000521418 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
POLB-210ENST00000521418 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
POLB-210ENST00000521418 SMARCA2P51531 1590 aa12.98□□□□□ -0.33
POLB-210ENST00000521418 HMGXB3Q12766 1538 aa12.96□□□□□ -0.33
POLB-210ENST00000521418 ATAD2BQ9ULI0 1458 aa12.94□□□□□ -0.34
POLB-210ENST00000521418 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
POLB-210ENST00000521418 NESP48681 1621 aa12.92□□□□□ -0.34
POLB-210ENST00000521418 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.34
POLB-210ENST00000521418 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
POLB-210ENST00000521418 SCAF1Q9H7N4 1312 aaKnown RBP12.87□□□□□ -0.35
POLB-210ENST00000521418 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
POLB-210ENST00000521418 MAPK8IP2Q13387 824 aaPredicted RBP12.84□□□□□ -0.35
POLB-210ENST00000521418 SMARCA4P51532 1647 aa12.82□□□□□ -0.36
POLB-210ENST00000521418 KIF21AQ7Z4S6 1674 aa12.78□□□□□ -0.36
POLB-210ENST00000521418 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
POLB-210ENST00000521418 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
POLB-210ENST00000521418 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
POLB-210ENST00000521418 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
POLB-210ENST00000521418 MRC2Q9UBG0 1479 aa12.74□□□□□ -0.37
POLB-210ENST00000521418 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.37
POLB-210ENST00000521418 WDR62O43379 1518 aa12.69□□□□□ -0.38
POLB-210ENST00000521418 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
POLB-210ENST00000521418 CEP164Q9UPV0 1460 aa12.62□□□□□ -0.39
POLB-210ENST00000521418 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
POLB-210ENST00000521418 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
POLB-210ENST00000521418 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
POLB-210ENST00000521418 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
POLB-210ENST00000521418 TRHP20396 242 aaPredicted RBP12.52□□□□□ -0.41
POLB-210ENST00000521418 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
POLB-210ENST00000521418 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
POLB-210ENST00000521418 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
POLB-210ENST00000521418 CYB5RLQ6IPT4 315 aa12.44□□□□□ -0.42
POLB-210ENST00000521418 CFTRP13569 1480 aa12.41□□□□□ -0.42
POLB-210ENST00000521418 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
POLB-210ENST00000521418 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
POLB-210ENST00000521418 URB2Q14146 1524 aaKnown RBP12.38□□□□□ -0.43
POLB-210ENST00000521418 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
POLB-210ENST00000521418 WIZO95785 1651 aa12.34□□□□□ -0.43
POLB-210ENST00000521418 RSF1Q96T23 1441 aaPredicted RBP12.32□□□□□ -0.44
POLB-210ENST00000521418 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
POLB-210ENST00000521418 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
POLB-210ENST00000521418 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
POLB-210ENST00000521418 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
POLB-210ENST00000521418 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
POLB-210ENST00000521418 FBLN2P98095 1184 aa12.26□□□□□ -0.45
POLB-210ENST00000521418 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
POLB-210ENST00000521418 CHD1O14646 1710 aa12.23□□□□□ -0.45
POLB-210ENST00000521418 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
POLB-210ENST00000521418 TOPBP1Q92547 1522 aa12.21□□□□□ -0.46
POLB-210ENST00000521418 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
POLB-210ENST00000521418 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
POLB-210ENST00000521418 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.47
POLB-210ENST00000521418 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
POLB-210ENST00000521418 CHMP7Q8WUX9 453 aaPredicted RBP12.12□□□□□ -0.47
POLB-210ENST00000521418 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
POLB-210ENST00000521418 WDR97A6NE52 1622 aa12.09□□□□□ -0.47
POLB-210ENST00000521418 KCNA4P22459 653 aa12.09□□□□□ -0.47
POLB-210ENST00000521418 CLASP1Q7Z460 1538 aa12.08□□□□□ -0.48
POLB-210ENST00000521418 DCAF8L1A6NGE4 600 aa12.06□□□□□ -0.48
POLB-210ENST00000521418 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
POLB-210ENST00000521418 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
POLB-210ENST00000521418 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
POLB-210ENST00000521418 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
POLB-210ENST00000521418 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
POLB-210ENST00000521418 SOGA1O94964 1423 aa12.03□□□□□ -0.48
POLB-210ENST00000521418 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.49
POLB-210ENST00000521418 SYNJ2O15056 1496 aa12.01□□□□□ -0.49
POLB-210ENST00000521418 GRIN2BQ13224 1484 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms