RNA–Protein interactions for RNA: ENST00000521398.5

LAMA4-215, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-215ENST00000521398 NISCHQ9Y2I1 1504 aa46.25■■■■■ 4.99
LAMA4-215ENST00000521398 CCDC180Q9P1Z9 1646 aa40.9■■■■■ 4.14
LAMA4-215ENST00000521398 ABCC9O60706 1549 aa39.31■■■■□ 3.88
LAMA4-215ENST00000521398 ZCCHC6Q5VYS8 1495 aaKnown RBP38.67■■■■□ 3.78
LAMA4-215ENST00000521398 DCAF1Q9Y4B6 1507 aa38.37■■■■□ 3.73
LAMA4-215ENST00000521398 MYO15BQ96JP2 1530 aa38.32■■■■□ 3.72
LAMA4-215ENST00000521398 NACADO15069 1562 aa38.29■■■■□ 3.72
LAMA4-215ENST00000521398 DCAF8L2P0C7V8 631 aa38.28■■■■□ 3.72
LAMA4-215ENST00000521398 RB1CC1Q8TDY2 1594 aa38.18■■■■□ 3.7
LAMA4-215ENST00000521398 SCRIBQ14160 1630 aa37.27■■■■□ 3.56
LAMA4-215ENST00000521398 UNC13AQ9UPW8 1703 aa37.25■■■■□ 3.55
LAMA4-215ENST00000521398 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
LAMA4-215ENST00000521398 PABPN1Q86U42 306 aaKnown RBP eCLIP36.8■■■■□ 3.48
LAMA4-215ENST00000521398 SHROOM4Q9ULL8 1493 aa36.78■■■■□ 3.48
LAMA4-215ENST00000521398 EIF4G1Q04637 1599 aaKnown RBP35.94■■■■□ 3.34
LAMA4-215ENST00000521398 CECR2Q9BXF3 1484 aa35.9■■■■□ 3.34
LAMA4-215ENST00000521398 BAZ1AQ9NRL2 1556 aaPredicted RBP35.83■■■■□ 3.33
LAMA4-215ENST00000521398 SMARCA4P51532 1647 aa35.76■■■■□ 3.31
LAMA4-215ENST00000521398 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
LAMA4-215ENST00000521398 MROH2BQ7Z745 1585 aa35.61■■■■□ 3.29
LAMA4-215ENST00000521398 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
LAMA4-215ENST00000521398 RSF1Q96T23 1441 aaPredicted RBP35.45■■■■□ 3.26
LAMA4-215ENST00000521398 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
LAMA4-215ENST00000521398 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
LAMA4-215ENST00000521398 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
LAMA4-215ENST00000521398 NCAPD3P42695 1498 aa35.32■■■■□ 3.24
LAMA4-215ENST00000521398 WIZO95785 1651 aa35.25■■■■□ 3.23
LAMA4-215ENST00000521398 HMGXB3Q12766 1538 aa35.22■■■■□ 3.23
LAMA4-215ENST00000521398 BAZ1BQ9UIG0 1483 aaKnown RBP35.15■■■■□ 3.22
LAMA4-215ENST00000521398 TOP2AP11388 1531 aaKnown RBP34.97■■■■□ 3.19
LAMA4-215ENST00000521398 SUPT5HO00267 1087 aaKnown RBP34.94■■■■□ 3.18
LAMA4-215ENST00000521398 CCDC88BA6NC98 1476 aa34.52■■■■□ 3.12
LAMA4-215ENST00000521398 CADPSQ9ULU8 1353 aa34.31■■■■□ 3.08
LAMA4-215ENST00000521398 LAMC3Q9Y6N6 1575 aa34.3■■■■□ 3.08
LAMA4-215ENST00000521398 CFTRP13569 1480 aa34.24■■■■□ 3.07
LAMA4-215ENST00000521398 NESP48681 1621 aa34.19■■■■□ 3.06
LAMA4-215ENST00000521398 PRDM2Q13029 1718 aa34.05■■■■□ 3.04
LAMA4-215ENST00000521398 PDS5BQ9NTI5 1447 aa34.04■■■■□ 3.04
LAMA4-215ENST00000521398 FANCD2Q9BXW9 1451 aa33.9■■■■□ 3.02
LAMA4-215ENST00000521398 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
LAMA4-215ENST00000521398 KIF21AQ7Z4S6 1674 aa33.83■■■■□ 3.01
LAMA4-215ENST00000521398 CEP164Q9UPV0 1460 aa33.81■■■■□ 3
LAMA4-215ENST00000521398 MRC2Q9UBG0 1479 aa33.64■■■□□ 2.98
LAMA4-215ENST00000521398 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
LAMA4-215ENST00000521398 ABCC8Q09428 1581 aa33.53■■■□□ 2.96
LAMA4-215ENST00000521398 WDR62O43379 1518 aa33.52■■■□□ 2.96
LAMA4-215ENST00000521398 URB2Q14146 1524 aaKnown RBP33.5■■■□□ 2.95
LAMA4-215ENST00000521398 DNMBPQ6XZF7 1577 aa33.46■■■□□ 2.95
LAMA4-215ENST00000521398 WRNQ14191 1432 aaPredicted RBP eCLIP33.42■■■□□ 2.94
LAMA4-215ENST00000521398 TOPBP1Q92547 1522 aa33.42■■■□□ 2.94
LAMA4-215ENST00000521398 CUX1P39880 1505 aa33.38■■■□□ 2.93
LAMA4-215ENST00000521398 CUX2O14529 1486 aa33.35■■■□□ 2.93
LAMA4-215ENST00000521398 TOP2BQ02880 1626 aa33.3■■■□□ 2.92
LAMA4-215ENST00000521398 BIVM-ERCC5R4GMW8 1640 aa33.3■■■□□ 2.92
LAMA4-215ENST00000521398 SYNJ1O43426 1573 aa33.27■■■□□ 2.92
LAMA4-215ENST00000521398 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
LAMA4-215ENST00000521398 FGD5Q6ZNL6 1462 aa33.18■■■□□ 2.9
LAMA4-215ENST00000521398 IFT140Q96RY7 1462 aa33.09■■■□□ 2.89
LAMA4-215ENST00000521398 SOGA1O94964 1423 aa33.05■■■□□ 2.88
LAMA4-215ENST00000521398 TRIM41Q8WV44 630 aa33.02■■■□□ 2.88
LAMA4-215ENST00000521398 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
LAMA4-215ENST00000521398 CHIC1Q5VXU3 224 aa33.01■■■□□ 2.87
LAMA4-215ENST00000521398 RAD54L2Q9Y4B4 1467 aa32.98■■■□□ 2.87
LAMA4-215ENST00000521398 ABCA10Q8WWZ4 1543 aa32.93■■■□□ 2.86
LAMA4-215ENST00000521398 WDR97A6NE52 1622 aa32.9■■■□□ 2.86
LAMA4-215ENST00000521398 ZNF608Q9ULD9 1512 aaPredicted RBP32.81■■■□□ 2.84
LAMA4-215ENST00000521398 EIF4G3O43432 1585 aaKnown RBP32.76■■■□□ 2.83
LAMA4-215ENST00000521398 TDRD9Q8NDG6 1382 aaKnown RBP32.76■■■□□ 2.83
LAMA4-215ENST00000521398 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
LAMA4-215ENST00000521398 AQRO60306 1485 aaKnown RBP eCLIP32.71■■■□□ 2.83
LAMA4-215ENST00000521398 KIF27Q86VH2 1401 aa32.7■■■□□ 2.83
LAMA4-215ENST00000521398 GAPVD1Q14C86 1478 aa32.7■■■□□ 2.82
LAMA4-215ENST00000521398 GRIN2BQ13224 1484 aa32.62■■■□□ 2.81
LAMA4-215ENST00000521398 PBRM1Q86U86 1689 aa32.58■■■□□ 2.81
LAMA4-215ENST00000521398 ERICH3Q5RHP9 1530 aa32.56■■■□□ 2.8
LAMA4-215ENST00000521398 EEA1Q15075 1411 aa32.54■■■□□ 2.8
LAMA4-215ENST00000521398 MAGI1Q96QZ7 1491 aaPredicted RBP32.49■■■□□ 2.79
LAMA4-215ENST00000521398 RUSC2Q8N2Y8 1516 aa32.49■■■□□ 2.79
LAMA4-215ENST00000521398 SNAPC4Q5SXM2 1469 aa32.46■■■□□ 2.79
LAMA4-215ENST00000521398 IGF1RP08069 1367 aa32.45■■■□□ 2.79
LAMA4-215ENST00000521398 CUL7Q14999 1698 aa32.39■■■□□ 2.78
LAMA4-215ENST00000521398 ADAMTS12P58397 1594 aa32.37■■■□□ 2.77
LAMA4-215ENST00000521398 FHAD1B1AJZ9 1412 aa32.36■■■□□ 2.77
LAMA4-215ENST00000521398 SYNJ2O15056 1496 aa32.34■■■□□ 2.77
LAMA4-215ENST00000521398 CSRNP3Q8WYN3 585 aa32.31■■■□□ 2.76
LAMA4-215ENST00000521398 CARMIL1Q5VZK9 1371 aa32.28■■■□□ 2.76
LAMA4-215ENST00000521398 FAM9AQ8IZU1 332 aaPredicted RBP32.25■■■□□ 2.75
LAMA4-215ENST00000521398 CHMP7Q8WUX9 453 aaPredicted RBP32.24■■■□□ 2.75
LAMA4-215ENST00000521398 PRXQ9BXM0 1461 aa32.22■■■□□ 2.75
LAMA4-215ENST00000521398 CHD1O14646 1710 aa32.2■■■□□ 2.75
LAMA4-215ENST00000521398 GRIN2AQ12879 1464 aa32.19■■■□□ 2.74
LAMA4-215ENST00000521398 FBLN2P98095 1184 aa32.19■■■□□ 2.74
LAMA4-215ENST00000521398 RAPGEF2Q9Y4G8 1499 aa32.18■■■□□ 2.74
LAMA4-215ENST00000521398 KIF21BO75037 1637 aa32.1■■■□□ 2.73
LAMA4-215ENST00000521398 NUP160Q12769 1436 aa32.04■■■□□ 2.72
LAMA4-215ENST00000521398 OSCARQ8IYS5 282 aa32.03■■■□□ 2.72
LAMA4-215ENST00000521398 CEP170Q5SW79 1584 aa31.98■■■□□ 2.71
LAMA4-215ENST00000521398 GOLGA3Q08378 1498 aa31.96■■■□□ 2.71
LAMA4-215ENST00000521398 CLASP1Q7Z460 1538 aa31.9■■■□□ 2.7
LAMA4-215ENST00000521398 KIAA0586Q9BVV6 1533 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms