RNA–Protein interactions for RNA: ENST00000521000.1

PTK2B-213, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 3

Gene PTK2B, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-213ENST00000521000 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
PTK2B-213ENST00000521000 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
PTK2B-213ENST00000521000 ABCC9O60706 1549 aa28.98■■■□□ 2.23
PTK2B-213ENST00000521000 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
PTK2B-213ENST00000521000 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
PTK2B-213ENST00000521000 DCAF1Q9Y4B6 1507 aa28.21■■■□□ 2.11
PTK2B-213ENST00000521000 NACADO15069 1562 aa28.15■■■□□ 2.1
PTK2B-213ENST00000521000 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
PTK2B-213ENST00000521000 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
PTK2B-213ENST00000521000 SCRIBQ14160 1630 aa27.52■■■□□ 2
PTK2B-213ENST00000521000 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
PTK2B-213ENST00000521000 UNC13AQ9UPW8 1703 aa27.38■■□□□ 1.97
PTK2B-213ENST00000521000 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
PTK2B-213ENST00000521000 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
PTK2B-213ENST00000521000 CECR2Q9BXF3 1484 aa26.56■■□□□ 1.84
PTK2B-213ENST00000521000 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
PTK2B-213ENST00000521000 BAZ1AQ9NRL2 1556 aaPredicted RBP26.4■■□□□ 1.82
PTK2B-213ENST00000521000 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
PTK2B-213ENST00000521000 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.81
PTK2B-213ENST00000521000 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
PTK2B-213ENST00000521000 CC2D2AQ9P2K1 1620 aa26.18■■□□□ 1.78
PTK2B-213ENST00000521000 DNAJC5BQ9UF47 199 aa26.14■■□□□ 1.78
PTK2B-213ENST00000521000 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
PTK2B-213ENST00000521000 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
PTK2B-213ENST00000521000 SMARCA2P51531 1590 aa26.07■■□□□ 1.76
PTK2B-213ENST00000521000 WIZO95785 1651 aa26.06■■□□□ 1.76
PTK2B-213ENST00000521000 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
PTK2B-213ENST00000521000 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
PTK2B-213ENST00000521000 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
PTK2B-213ENST00000521000 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
PTK2B-213ENST00000521000 TOP2AP11388 1531 aaKnown RBP25.79■■□□□ 1.72
PTK2B-213ENST00000521000 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
PTK2B-213ENST00000521000 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
PTK2B-213ENST00000521000 NESP48681 1621 aa25.23■■□□□ 1.63
PTK2B-213ENST00000521000 CFTRP13569 1480 aa25.22■■□□□ 1.63
PTK2B-213ENST00000521000 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
PTK2B-213ENST00000521000 PDS5BQ9NTI5 1447 aa25.05■■□□□ 1.6
PTK2B-213ENST00000521000 PRDM2Q13029 1718 aa25■■□□□ 1.59
PTK2B-213ENST00000521000 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
PTK2B-213ENST00000521000 ERCC6Q03468 1493 aa24.94■■□□□ 1.58
PTK2B-213ENST00000521000 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
PTK2B-213ENST00000521000 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
PTK2B-213ENST00000521000 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
PTK2B-213ENST00000521000 MRC2Q9UBG0 1479 aa24.74■■□□□ 1.55
PTK2B-213ENST00000521000 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
PTK2B-213ENST00000521000 URB2Q14146 1524 aaKnown RBP24.69■■□□□ 1.54
PTK2B-213ENST00000521000 CHIC1Q5VXU3 224 aa24.68■■□□□ 1.54
PTK2B-213ENST00000521000 CUX1P39880 1505 aa24.66■■□□□ 1.54
PTK2B-213ENST00000521000 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
PTK2B-213ENST00000521000 TOPBP1Q92547 1522 aa24.64■■□□□ 1.53
PTK2B-213ENST00000521000 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
PTK2B-213ENST00000521000 THOC2Q8NI27 1593 aaKnown RBP24.63■■□□□ 1.53
PTK2B-213ENST00000521000 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
PTK2B-213ENST00000521000 WDR62O43379 1518 aa24.6■■□□□ 1.53
PTK2B-213ENST00000521000 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
PTK2B-213ENST00000521000 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
PTK2B-213ENST00000521000 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
PTK2B-213ENST00000521000 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
PTK2B-213ENST00000521000 SOGA1O94964 1423 aa24.44■■□□□ 1.5
PTK2B-213ENST00000521000 CUX2O14529 1486 aa24.4■■□□□ 1.5
PTK2B-213ENST00000521000 RAD54L2Q9Y4B4 1467 aa24.39■■□□□ 1.5
PTK2B-213ENST00000521000 IFT140Q96RY7 1462 aa24.35■■□□□ 1.49
PTK2B-213ENST00000521000 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
PTK2B-213ENST00000521000 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
PTK2B-213ENST00000521000 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
PTK2B-213ENST00000521000 ZNF608Q9ULD9 1512 aaPredicted RBP24.21■■□□□ 1.47
PTK2B-213ENST00000521000 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
PTK2B-213ENST00000521000 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
PTK2B-213ENST00000521000 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.461e-6■■■■□ 21.1
PTK2B-213ENST00000521000 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
PTK2B-213ENST00000521000 FAM9AQ8IZU1 332 aaPredicted RBP24.15■■□□□ 1.46
PTK2B-213ENST00000521000 GAPVD1Q14C86 1478 aa24.13■■□□□ 1.45
PTK2B-213ENST00000521000 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
PTK2B-213ENST00000521000 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
PTK2B-213ENST00000521000 EEA1Q15075 1411 aa24.06■■□□□ 1.44
PTK2B-213ENST00000521000 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
PTK2B-213ENST00000521000 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
PTK2B-213ENST00000521000 IGF1RP08069 1367 aa24.03■■□□□ 1.44
PTK2B-213ENST00000521000 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
PTK2B-213ENST00000521000 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
PTK2B-213ENST00000521000 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
PTK2B-213ENST00000521000 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
PTK2B-213ENST00000521000 MAGI1Q96QZ7 1491 aaPredicted RBP23.89■■□□□ 1.42
PTK2B-213ENST00000521000 FBLN2P98095 1184 aa23.87■■□□□ 1.41
PTK2B-213ENST00000521000 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
PTK2B-213ENST00000521000 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
PTK2B-213ENST00000521000 CUL7Q14999 1698 aa23.85■■□□□ 1.41
PTK2B-213ENST00000521000 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
PTK2B-213ENST00000521000 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
PTK2B-213ENST00000521000 ADAMTS12P58397 1594 aa23.82■■□□□ 1.4
PTK2B-213ENST00000521000 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
PTK2B-213ENST00000521000 RAPGEF2Q9Y4G8 1499 aa23.8■■□□□ 1.4
PTK2B-213ENST00000521000 KIF21BO75037 1637 aa23.73■■□□□ 1.39
PTK2B-213ENST00000521000 LOC105371045A0A1W2PR82 267 aa23.72■■□□□ 1.39
PTK2B-213ENST00000521000 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
PTK2B-213ENST00000521000 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
PTK2B-213ENST00000521000 GOLGA3Q08378 1498 aa23.69■■□□□ 1.38
PTK2B-213ENST00000521000 CHD1O14646 1710 aa23.68■■□□□ 1.38
PTK2B-213ENST00000521000 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
PTK2B-213ENST00000521000 NUP160Q12769 1436 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms