RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 NISCHQ9Y2I1 1504 aa15.21■□□□□ 0.03
IGHV4-55-201ENST00000520889 CCDC180Q9P1Z9 1646 aa13.53□□□□□ -0.24
IGHV4-55-201ENST00000520889 ABCC9O60706 1549 aa12.88□□□□□ -0.35
IGHV4-55-201ENST00000520889 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
IGHV4-55-201ENST00000520889 MYO15BQ96JP2 1530 aa12.69□□□□□ -0.38
IGHV4-55-201ENST00000520889 DCAF1Q9Y4B6 1507 aa12.68□□□□□ -0.38
IGHV4-55-201ENST00000520889 NACADO15069 1562 aa12.64□□□□□ -0.39
IGHV4-55-201ENST00000520889 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
IGHV4-55-201ENST00000520889 DCAF8L2P0C7V8 631 aa12.46□□□□□ -0.41
IGHV4-55-201ENST00000520889 UNC13AQ9UPW8 1703 aa12.31□□□□□ -0.44
IGHV4-55-201ENST00000520889 SCRIBQ14160 1630 aa12.21□□□□□ -0.46
IGHV4-55-201ENST00000520889 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
IGHV4-55-201ENST00000520889 BICRAQ9NZM4 1560 aa12.17□□□□□ -0.46
IGHV4-55-201ENST00000520889 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
IGHV4-55-201ENST00000520889 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
IGHV4-55-201ENST00000520889 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
IGHV4-55-201ENST00000520889 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
IGHV4-55-201ENST00000520889 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
IGHV4-55-201ENST00000520889 CC2D2AQ9P2K1 1620 aa11.73□□□□□ -0.53
IGHV4-55-201ENST00000520889 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
IGHV4-55-201ENST00000520889 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
IGHV4-55-201ENST00000520889 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
IGHV4-55-201ENST00000520889 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
IGHV4-55-201ENST00000520889 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
IGHV4-55-201ENST00000520889 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
IGHV4-55-201ENST00000520889 HMGXB3Q12766 1538 aa11.62□□□□□ -0.55
IGHV4-55-201ENST00000520889 DNAJC5BQ9UF47 199 aa11.62□□□□□ -0.55
IGHV4-55-201ENST00000520889 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
IGHV4-55-201ENST00000520889 WIZO95785 1651 aa11.56□□□□□ -0.56
IGHV4-55-201ENST00000520889 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
IGHV4-55-201ENST00000520889 TOP2AP11388 1531 aaKnown RBP11.5□□□□□ -0.57
IGHV4-55-201ENST00000520889 SUPT5HO00267 1087 aaKnown RBP11.34□□□□□ -0.59
IGHV4-55-201ENST00000520889 CCDC88BA6NC98 1476 aa11.32□□□□□ -0.6
IGHV4-55-201ENST00000520889 LAMC3Q9Y6N6 1575 aa11.32□□□□□ -0.6
IGHV4-55-201ENST00000520889 PRDM2Q13029 1718 aa11.28□□□□□ -0.6
IGHV4-55-201ENST00000520889 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
IGHV4-55-201ENST00000520889 CFTRP13569 1480 aa11.27□□□□□ -0.6
IGHV4-55-201ENST00000520889 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
IGHV4-55-201ENST00000520889 NESP48681 1621 aa11.19□□□□□ -0.62
IGHV4-55-201ENST00000520889 KIF21AQ7Z4S6 1674 aa11.14□□□□□ -0.63
IGHV4-55-201ENST00000520889 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
IGHV4-55-201ENST00000520889 ERCC6Q03468 1493 aa11.11□□□□□ -0.63
IGHV4-55-201ENST00000520889 CEP164Q9UPV0 1460 aa11.11□□□□□ -0.63
IGHV4-55-201ENST00000520889 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
IGHV4-55-201ENST00000520889 THOC2Q8NI27 1593 aaKnown RBP11.07□□□□□ -0.64
IGHV4-55-201ENST00000520889 MRC2Q9UBG0 1479 aa11.06□□□□□ -0.64
IGHV4-55-201ENST00000520889 WDR62O43379 1518 aa11.05□□□□□ -0.64
IGHV4-55-201ENST00000520889 DNMBPQ6XZF7 1577 aa11.02□□□□□ -0.65
IGHV4-55-201ENST00000520889 CUX2O14529 1486 aa11.01□□□□□ -0.65
IGHV4-55-201ENST00000520889 URB2Q14146 1524 aaKnown RBP10.99□□□□□ -0.65
IGHV4-55-201ENST00000520889 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
IGHV4-55-201ENST00000520889 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
IGHV4-55-201ENST00000520889 TOP2BQ02880 1626 aa10.96□□□□□ -0.65
IGHV4-55-201ENST00000520889 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.65
IGHV4-55-201ENST00000520889 CUX1P39880 1505 aa10.95□□□□□ -0.66
IGHV4-55-201ENST00000520889 SYNJ1O43426 1573 aa10.9□□□□□ -0.66
IGHV4-55-201ENST00000520889 IFT140Q96RY7 1462 aa10.9□□□□□ -0.66
IGHV4-55-201ENST00000520889 WDR97A6NE52 1622 aa10.9□□□□□ -0.66
IGHV4-55-201ENST00000520889 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
IGHV4-55-201ENST00000520889 FGD5Q6ZNL6 1462 aa10.88□□□□□ -0.67
IGHV4-55-201ENST00000520889 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
IGHV4-55-201ENST00000520889 SOGA1O94964 1423 aa10.84□□□□□ -0.67
IGHV4-55-201ENST00000520889 ABCA10Q8WWZ4 1543 aa10.84□□□□□ -0.67
IGHV4-55-201ENST00000520889 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
IGHV4-55-201ENST00000520889 RAD54L2Q9Y4B4 1467 aa10.8□□□□□ -0.68
IGHV4-55-201ENST00000520889 ABCA5Q8WWZ7 1642 aa10.78□□□□□ -0.68
IGHV4-55-201ENST00000520889 TRIM41Q8WV44 630 aa10.78□□□□□ -0.68
IGHV4-55-201ENST00000520889 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.69
IGHV4-55-201ENST00000520889 ZNF608Q9ULD9 1512 aaPredicted RBP10.75□□□□□ -0.69
IGHV4-55-201ENST00000520889 PBRM1Q86U86 1689 aa10.74□□□□□ -0.69
IGHV4-55-201ENST00000520889 KIF27Q86VH2 1401 aa10.74□□□□□ -0.69
IGHV4-55-201ENST00000520889 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
IGHV4-55-201ENST00000520889 ERICH3Q5RHP9 1530 aa10.73□□□□□ -0.69
IGHV4-55-201ENST00000520889 GRIN2BQ13224 1484 aa10.72□□□□□ -0.69
IGHV4-55-201ENST00000520889 AQRO60306 1485 aaKnown RBP eCLIP10.71□□□□□ -0.69
IGHV4-55-201ENST00000520889 TDRD9Q8NDG6 1382 aaKnown RBP10.71□□□□□ -0.69
IGHV4-55-201ENST00000520889 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
IGHV4-55-201ENST00000520889 EEA1Q15075 1411 aa10.7□□□□□ -0.7
IGHV4-55-201ENST00000520889 CUL7Q14999 1698 aa10.68□□□□□ -0.7
IGHV4-55-201ENST00000520889 ADAMTS12P58397 1594 aa10.65□□□□□ -0.71
IGHV4-55-201ENST00000520889 SNAPC4Q5SXM2 1469 aa10.64□□□□□ -0.71
IGHV4-55-201ENST00000520889 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
IGHV4-55-201ENST00000520889 IGF1RP08069 1367 aa10.64□□□□□ -0.71
IGHV4-55-201ENST00000520889 SYNJ2O15056 1496 aa10.63□□□□□ -0.71
IGHV4-55-201ENST00000520889 CHD1O14646 1710 aa10.61□□□□□ -0.71
IGHV4-55-201ENST00000520889 RUSC2Q8N2Y8 1516 aa10.6□□□□□ -0.71
IGHV4-55-201ENST00000520889 GRIN2AQ12879 1464 aa10.58□□□□□ -0.72
IGHV4-55-201ENST00000520889 PRXQ9BXM0 1461 aa10.58□□□□□ -0.72
IGHV4-55-201ENST00000520889 CARMIL1Q5VZK9 1371 aa10.58□□□□□ -0.72
IGHV4-55-201ENST00000520889 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
IGHV4-55-201ENST00000520889 RAPGEF2Q9Y4G8 1499 aa10.56□□□□□ -0.72
IGHV4-55-201ENST00000520889 KIF21BO75037 1637 aa10.56□□□□□ -0.72
IGHV4-55-201ENST00000520889 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
IGHV4-55-201ENST00000520889 NUP160Q12769 1436 aa10.54□□□□□ -0.72
IGHV4-55-201ENST00000520889 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
IGHV4-55-201ENST00000520889 CLASP1Q7Z460 1538 aa10.51□□□□□ -0.73
IGHV4-55-201ENST00000520889 CEP170Q5SW79 1584 aa10.5□□□□□ -0.73
IGHV4-55-201ENST00000520889 CTTNBP2Q8WZ74 1663 aa10.5□□□□□ -0.73
IGHV4-55-201ENST00000520889 KIAA0586Q9BVV6 1533 aa10.49□□□□□ -0.73
IGHV4-55-201ENST00000520889 FBLN2P98095 1184 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms