RNA–Protein interactions for RNA: ENST00000520618.5

SNX16-208, Transcript of sorting nexin 16, humanhuman

TSL 3

Gene SNX16, Length 669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-208ENST00000520618 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
SNX16-208ENST00000520618 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
SNX16-208ENST00000520618 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
SNX16-208ENST00000520618 ABCC9O60706 1549 aa21.29■■□□□ 1
SNX16-208ENST00000520618 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
SNX16-208ENST00000520618 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
SNX16-208ENST00000520618 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
SNX16-208ENST00000520618 DNAJC5Q9H3Z4 198 aa19.78■□□□□ 0.76
SNX16-208ENST00000520618 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
SNX16-208ENST00000520618 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
SNX16-208ENST00000520618 NACADO15069 1562 aa19.53■□□□□ 0.72
SNX16-208ENST00000520618 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
SNX16-208ENST00000520618 BICRAQ9NZM4 1560 aa19.36■□□□□ 0.69
SNX16-208ENST00000520618 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
SNX16-208ENST00000520618 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
SNX16-208ENST00000520618 CC2D2AQ9P2K1 1620 aa19.2■□□□□ 0.66
SNX16-208ENST00000520618 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
SNX16-208ENST00000520618 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
SNX16-208ENST00000520618 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
SNX16-208ENST00000520618 EIF4G1Q04637 1599 aaKnown RBP18.94■□□□□ 0.62
SNX16-208ENST00000520618 CUX2O14529 1486 aa18.77■□□□□ 0.59
SNX16-208ENST00000520618 SCRIBQ14160 1630 aa18.52■□□□□ 0.55
SNX16-208ENST00000520618 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
SNX16-208ENST00000520618 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
SNX16-208ENST00000520618 DCAF1Q9Y4B6 1507 aa18.41■□□□□ 0.54
SNX16-208ENST00000520618 FOXD1Q16676 465 aa18.36■□□□□ 0.53
SNX16-208ENST00000520618 ZCCHC6Q5VYS8 1495 aaKnown RBP18.32■□□□□ 0.52
SNX16-208ENST00000520618 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
SNX16-208ENST00000520618 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
SNX16-208ENST00000520618 NESP48681 1621 aa18.04■□□□□ 0.48
SNX16-208ENST00000520618 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
SNX16-208ENST00000520618 ATAD2BQ9ULI0 1458 aa17.87■□□□□ 0.45
SNX16-208ENST00000520618 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
SNX16-208ENST00000520618 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
SNX16-208ENST00000520618 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
SNX16-208ENST00000520618 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
SNX16-208ENST00000520618 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
SNX16-208ENST00000520618 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
SNX16-208ENST00000520618 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
SNX16-208ENST00000520618 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
SNX16-208ENST00000520618 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
SNX16-208ENST00000520618 WDR62O43379 1518 aa17.62■□□□□ 0.41
SNX16-208ENST00000520618 RIMBP3CA6NJZ7 1639 aa17.6■□□□□ 0.41
SNX16-208ENST00000520618 RIMBP3BA6NNM3 1639 aa17.6■□□□□ 0.41
SNX16-208ENST00000520618 SMARCA4P51532 1647 aa17.6■□□□□ 0.41
SNX16-208ENST00000520618 RIMBP3Q9UFD9 1639 aa17.6■□□□□ 0.41
SNX16-208ENST00000520618 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
SNX16-208ENST00000520618 PEG3Q9GZU2 1588 aa17.46■□□□□ 0.39
SNX16-208ENST00000520618 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
SNX16-208ENST00000520618 MSH5O43196 834 aa17.43■□□□□ 0.38
SNX16-208ENST00000520618 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
SNX16-208ENST00000520618 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
SNX16-208ENST00000520618 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
SNX16-208ENST00000520618 ARAP1Q96P48 1450 aa17.24■□□□□ 0.35
SNX16-208ENST00000520618 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
SNX16-208ENST00000520618 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
SNX16-208ENST00000520618 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
SNX16-208ENST00000520618 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
SNX16-208ENST00000520618 RSF1Q96T23 1441 aaPredicted RBP17.08■□□□□ 0.32
SNX16-208ENST00000520618 CFTRP13569 1480 aa17.07■□□□□ 0.32
SNX16-208ENST00000520618 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
SNX16-208ENST00000520618 PIAS4Q8N2W9 510 aaPredicted RBP17.04■□□□□ 0.32
SNX16-208ENST00000520618 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
SNX16-208ENST00000520618 CHD1O14646 1710 aa16.99■□□□□ 0.31
SNX16-208ENST00000520618 EIF4G3O43432 1585 aaKnown RBP16.96■□□□□ 0.31
SNX16-208ENST00000520618 WIZO95785 1651 aa16.9■□□□□ 0.3
SNX16-208ENST00000520618 FBLN2P98095 1184 aa16.83■□□□□ 0.28
SNX16-208ENST00000520618 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
SNX16-208ENST00000520618 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
SNX16-208ENST00000520618 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNX16-208ENST00000520618 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
SNX16-208ENST00000520618 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
SNX16-208ENST00000520618 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
SNX16-208ENST00000520618 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
SNX16-208ENST00000520618 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
SNX16-208ENST00000520618 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
SNX16-208ENST00000520618 PLPPR3Q6T4P5 718 aa16.69■□□□□ 0.26
SNX16-208ENST00000520618 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
SNX16-208ENST00000520618 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
SNX16-208ENST00000520618 ADRA2BP18089 450 aa16.64■□□□□ 0.25
SNX16-208ENST00000520618 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
SNX16-208ENST00000520618 KDM4FA0A1W2PPD8 638 aa16.62■□□□□ 0.25
SNX16-208ENST00000520618 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
SNX16-208ENST00000520618 CHMP7Q8WUX9 453 aaPredicted RBP16.58■□□□□ 0.24
SNX16-208ENST00000520618 MAGI1Q96QZ7 1491 aaPredicted RBP16.56■□□□□ 0.24
SNX16-208ENST00000520618 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
SNX16-208ENST00000520618 KIF13AQ9H1H9 1805 aa16.55■□□□□ 0.24
SNX16-208ENST00000520618 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
SNX16-208ENST00000520618 WDR97A6NE52 1622 aa16.52■□□□□ 0.24
SNX16-208ENST00000520618 SYNJ2O15056 1496 aa16.51■□□□□ 0.23
SNX16-208ENST00000520618 SOGA1O94964 1423 aa16.47■□□□□ 0.23
SNX16-208ENST00000520618 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
SNX16-208ENST00000520618 CCDC88BA6NC98 1476 aa16.46■□□□□ 0.23
SNX16-208ENST00000520618 GRIN2BQ13224 1484 aa16.46■□□□□ 0.23
SNX16-208ENST00000520618 KDM6BO15054 1643 aa16.37■□□□□ 0.21
SNX16-208ENST00000520618 ABCC10Q5T3U5 1492 aa16.35■□□□□ 0.21
SNX16-208ENST00000520618 CEP170Q5SW79 1584 aa16.35■□□□□ 0.21
SNX16-208ENST00000520618 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
SNX16-208ENST00000520618 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
SNX16-208ENST00000520618 FAM69CQ0P6D2 419 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms