RNA–Protein interactions for RNA: ENST00000520563.3

SORBS3-209, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 4

Gene SORBS3, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-209ENST00000520563 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
SORBS3-209ENST00000520563 ABCC9O60706 1549 aa26.39■■□□□ 1.82
SORBS3-209ENST00000520563 CCDC180Q9P1Z9 1646 aa25.78■■□□□ 1.72
SORBS3-209ENST00000520563 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
SORBS3-209ENST00000520563 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
SORBS3-209ENST00000520563 NACADO15069 1562 aa24.51■■□□□ 1.51
SORBS3-209ENST00000520563 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
SORBS3-209ENST00000520563 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
SORBS3-209ENST00000520563 DCAF8L2P0C7V8 631 aa24.23■■□□□ 1.47
SORBS3-209ENST00000520563 BICRAQ9NZM4 1560 aa24.17■■□□□ 1.46
SORBS3-209ENST00000520563 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
SORBS3-209ENST00000520563 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
SORBS3-209ENST00000520563 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
SORBS3-209ENST00000520563 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
SORBS3-209ENST00000520563 DNAJC5Q9H3Z4 198 aa23.66■■□□□ 1.38
SORBS3-209ENST00000520563 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
SORBS3-209ENST00000520563 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
SORBS3-209ENST00000520563 ZCCHC6Q5VYS8 1495 aaKnown RBP23.44■■□□□ 1.34
SORBS3-209ENST00000520563 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
SORBS3-209ENST00000520563 CUX2O14529 1486 aa22.98■■□□□ 1.27
SORBS3-209ENST00000520563 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
SORBS3-209ENST00000520563 NCAPD3P42695 1498 aa22.64■■□□□ 1.21
SORBS3-209ENST00000520563 NESP48681 1621 aa22.51■■□□□ 1.19
SORBS3-209ENST00000520563 ATAD2BQ9ULI0 1458 aa22.49■■□□□ 1.19
SORBS3-209ENST00000520563 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
SORBS3-209ENST00000520563 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
SORBS3-209ENST00000520563 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
SORBS3-209ENST00000520563 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
SORBS3-209ENST00000520563 SMARCA4P51532 1647 aa22.32■■□□□ 1.16
SORBS3-209ENST00000520563 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
SORBS3-209ENST00000520563 LAMC3Q9Y6N6 1575 aa22.23■■□□□ 1.15
SORBS3-209ENST00000520563 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
SORBS3-209ENST00000520563 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
SORBS3-209ENST00000520563 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
SORBS3-209ENST00000520563 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
SORBS3-209ENST00000520563 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
SORBS3-209ENST00000520563 WDR62O43379 1518 aa21.96■■□□□ 1.11
SORBS3-209ENST00000520563 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
SORBS3-209ENST00000520563 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
SORBS3-209ENST00000520563 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
SORBS3-209ENST00000520563 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
SORBS3-209ENST00000520563 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
SORBS3-209ENST00000520563 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
SORBS3-209ENST00000520563 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
SORBS3-209ENST00000520563 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
SORBS3-209ENST00000520563 WIZO95785 1651 aa21.63■■□□□ 1.05
SORBS3-209ENST00000520563 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
SORBS3-209ENST00000520563 CFTRP13569 1480 aa21.55■■□□□ 1.04
SORBS3-209ENST00000520563 ARHGEF11O15085 1522 aa21.51■■□□□ 1.03
SORBS3-209ENST00000520563 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.02
SORBS3-209ENST00000520563 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
SORBS3-209ENST00000520563 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
SORBS3-209ENST00000520563 TOP2AP11388 1531 aaKnown RBP21.3■■□□□ 1
SORBS3-209ENST00000520563 TRHP20396 242 aaPredicted RBP21.3■■□□□ 1
SORBS3-209ENST00000520563 PRDM2Q13029 1718 aa21.29■■□□□ 1
SORBS3-209ENST00000520563 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
SORBS3-209ENST00000520563 EIF4G3O43432 1585 aaKnown RBP21.25■□□□□ 0.99
SORBS3-209ENST00000520563 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
SORBS3-209ENST00000520563 TOPBP1Q92547 1522 aa21.21■□□□□ 0.99
SORBS3-209ENST00000520563 CHD1O14646 1710 aa21.21■□□□□ 0.99
SORBS3-209ENST00000520563 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
SORBS3-209ENST00000520563 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.973e-7■■□□□ 11.5
SORBS3-209ENST00000520563 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
SORBS3-209ENST00000520563 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
SORBS3-209ENST00000520563 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
SORBS3-209ENST00000520563 FBLN2P98095 1184 aa21.07■□□□□ 0.96
SORBS3-209ENST00000520563 CCDC88BA6NC98 1476 aa21.06■□□□□ 0.96
SORBS3-209ENST00000520563 POLA1P09884 1462 aaPredicted RBP20.95■□□□□ 0.94
SORBS3-209ENST00000520563 CLASP1Q7Z460 1538 aa20.95■□□□□ 0.94
SORBS3-209ENST00000520563 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
SORBS3-209ENST00000520563 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
SORBS3-209ENST00000520563 TDRD9Q8NDG6 1382 aaKnown RBP20.88■□□□□ 0.93
SORBS3-209ENST00000520563 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
SORBS3-209ENST00000520563 SOGA1O94964 1423 aa20.82■□□□□ 0.92
SORBS3-209ENST00000520563 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
SORBS3-209ENST00000520563 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
SORBS3-209ENST00000520563 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
SORBS3-209ENST00000520563 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
SORBS3-209ENST00000520563 FGD5Q6ZNL6 1462 aa20.74■□□□□ 0.91
SORBS3-209ENST00000520563 SYNJ2O15056 1496 aa20.73■□□□□ 0.91
SORBS3-209ENST00000520563 GRIN2BQ13224 1484 aa20.72■□□□□ 0.91
SORBS3-209ENST00000520563 CUX1P39880 1505 aa20.63■□□□□ 0.89
SORBS3-209ENST00000520563 PBRM1Q86U86 1689 aa20.62■□□□□ 0.89
SORBS3-209ENST00000520563 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
SORBS3-209ENST00000520563 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
SORBS3-209ENST00000520563 KIF13AQ9H1H9 1805 aa20.49■□□□□ 0.87
SORBS3-209ENST00000520563 CEP170Q5SW79 1584 aa20.49■□□□□ 0.87
SORBS3-209ENST00000520563 GRIN2AQ12879 1464 aa20.47■□□□□ 0.87
SORBS3-209ENST00000520563 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
SORBS3-209ENST00000520563 NUP160Q12769 1436 aa20.42■□□□□ 0.86
SORBS3-209ENST00000520563 SHROOM2Q13796 1616 aa20.42■□□□□ 0.86
SORBS3-209ENST00000520563 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
SORBS3-209ENST00000520563 ILDR1Q86SU0 546 aaPredicted RBP20.31■□□□□ 0.84
SORBS3-209ENST00000520563 ABCC10Q5T3U5 1492 aa20.29■□□□□ 0.84
SORBS3-209ENST00000520563 KDM4FA0A1W2PPD8 638 aa20.28■□□□□ 0.84
SORBS3-209ENST00000520563 FAM69CQ0P6D2 419 aa20.28■□□□□ 0.84
SORBS3-209ENST00000520563 FHAD1B1AJZ9 1412 aa20.27■□□□□ 0.84
SORBS3-209ENST00000520563 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.83
SORBS3-209ENST00000520563 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
SORBS3-209ENST00000520563 DIP2BQ9P265 1576 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms