RNA–Protein interactions for RNA: ENST00000520463.1

PCNX2-222, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-222ENST00000520463 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
PCNX2-222ENST00000520463 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
PCNX2-222ENST00000520463 NISCHQ9Y2I1 1504 aa18.99■□□□□ 0.63
PCNX2-222ENST00000520463 ABCC9O60706 1549 aa17.88■□□□□ 0.45
PCNX2-222ENST00000520463 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
PCNX2-222ENST00000520463 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
PCNX2-222ENST00000520463 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
PCNX2-222ENST00000520463 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
PCNX2-222ENST00000520463 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
PCNX2-222ENST00000520463 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCNX2-222ENST00000520463 NACADO15069 1562 aa16.52■□□□□ 0.24
PCNX2-222ENST00000520463 DNAJC5Q9H3Z4 198 aa16.47■□□□□ 0.23
PCNX2-222ENST00000520463 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
PCNX2-222ENST00000520463 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
PCNX2-222ENST00000520463 DCAF8L2P0C7V8 631 aa16.27■□□□□ 0.2
PCNX2-222ENST00000520463 CECR2Q9BXF3 1484 aa16.19■□□□□ 0.18
PCNX2-222ENST00000520463 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
PCNX2-222ENST00000520463 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
PCNX2-222ENST00000520463 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
PCNX2-222ENST00000520463 FOXD1Q16676 465 aa16.02■□□□□ 0.16
PCNX2-222ENST00000520463 EIF4G1Q04637 1599 aaKnown RBP15.95■□□□□ 0.14
PCNX2-222ENST00000520463 CUX2O14529 1486 aa15.71■□□□□ 0.1
PCNX2-222ENST00000520463 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
PCNX2-222ENST00000520463 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
PCNX2-222ENST00000520463 ZCCHC6Q5VYS8 1495 aaKnown RBP15.59■□□□□ 0.09
PCNX2-222ENST00000520463 ERCC6Q03468 1493 aa15.46■□□□□ 0.07
PCNX2-222ENST00000520463 TRIM41Q8WV44 630 aa15.38■□□□□ 0.05
PCNX2-222ENST00000520463 NCAPD3P42695 1498 aa15.3■□□□□ 0.04
PCNX2-222ENST00000520463 NESP48681 1621 aa15.18■□□□□ 0.02
PCNX2-222ENST00000520463 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
PCNX2-222ENST00000520463 THOC2Q8NI27 1593 aaKnown RBP15.15■□□□□ 0.02
PCNX2-222ENST00000520463 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
PCNX2-222ENST00000520463 HMGXB3Q12766 1538 aa15.07■□□□□ 0
PCNX2-222ENST00000520463 SMARCA2P51531 1590 aa15.02■□□□□ -0
PCNX2-222ENST00000520463 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
PCNX2-222ENST00000520463 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
PCNX2-222ENST00000520463 PDS5BQ9NTI5 1447 aa14.96□□□□□ -0.01
PCNX2-222ENST00000520463 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
PCNX2-222ENST00000520463 ADRA2BP18089 450 aa14.94□□□□□ -0.02
PCNX2-222ENST00000520463 KIF21AQ7Z4S6 1674 aa14.93□□□□□ -0.02
PCNX2-222ENST00000520463 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
PCNX2-222ENST00000520463 MSH5O43196 834 aa14.91□□□□□ -0.02
PCNX2-222ENST00000520463 SMARCA4P51532 1647 aa14.91□□□□□ -0.02
PCNX2-222ENST00000520463 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
PCNX2-222ENST00000520463 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
PCNX2-222ENST00000520463 MRC2Q9UBG0 1479 aa14.82□□□□□ -0.04
PCNX2-222ENST00000520463 WDR62O43379 1518 aa14.82□□□□□ -0.04
PCNX2-222ENST00000520463 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
PCNX2-222ENST00000520463 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
PCNX2-222ENST00000520463 RIMBP3CA6NJZ7 1639 aa14.72□□□□□ -0.05
PCNX2-222ENST00000520463 RIMBP3BA6NNM3 1639 aa14.72□□□□□ -0.05
PCNX2-222ENST00000520463 RIMBP3Q9UFD9 1639 aa14.72□□□□□ -0.05
PCNX2-222ENST00000520463 POTEDQ86YR6 584 aa14.69□□□□□ -0.06
PCNX2-222ENST00000520463 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
PCNX2-222ENST00000520463 ARHGEF11O15085 1522 aa14.62□□□□□ -0.07
PCNX2-222ENST00000520463 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
PCNX2-222ENST00000520463 TRHP20396 242 aaPredicted RBP14.59□□□□□ -0.07
PCNX2-222ENST00000520463 CYB5RLQ6IPT4 315 aa14.59□□□□□ -0.07
PCNX2-222ENST00000520463 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
PCNX2-222ENST00000520463 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
PCNX2-222ENST00000520463 CFTRP13569 1480 aa14.48□□□□□ -0.09
PCNX2-222ENST00000520463 ARAP1Q96P48 1450 aa14.44□□□□□ -0.1
PCNX2-222ENST00000520463 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
PCNX2-222ENST00000520463 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
PCNX2-222ENST00000520463 WIZO95785 1651 aa14.37□□□□□ -0.11
PCNX2-222ENST00000520463 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
PCNX2-222ENST00000520463 CHD1O14646 1710 aa14.27□□□□□ -0.12
PCNX2-222ENST00000520463 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
PCNX2-222ENST00000520463 FBLN2P98095 1184 aa14.23□□□□□ -0.13
PCNX2-222ENST00000520463 TOPBP1Q92547 1522 aa14.23□□□□□ -0.13
PCNX2-222ENST00000520463 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.13
PCNX2-222ENST00000520463 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
PCNX2-222ENST00000520463 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
PCNX2-222ENST00000520463 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
PCNX2-222ENST00000520463 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
PCNX2-222ENST00000520463 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
PCNX2-222ENST00000520463 ILDR1Q86SU0 546 aaPredicted RBP14.13□□□□□ -0.15
PCNX2-222ENST00000520463 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
PCNX2-222ENST00000520463 SYNJ1O43426 1573 aa14.06□□□□□ -0.16
PCNX2-222ENST00000520463 CHMP7Q8WUX9 453 aaPredicted RBP14.06□□□□□ -0.16
PCNX2-222ENST00000520463 POLA1P09884 1462 aaPredicted RBP14.05□□□□□ -0.16
PCNX2-222ENST00000520463 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
PCNX2-222ENST00000520463 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
PCNX2-222ENST00000520463 CCDC88BA6NC98 1476 aa14.03□□□□□ -0.16
PCNX2-222ENST00000520463 SNAPC4Q5SXM2 1469 aa14.02□□□□□ -0.16
PCNX2-222ENST00000520463 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
PCNX2-222ENST00000520463 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
PCNX2-222ENST00000520463 SOGA1O94964 1423 aa13.99□□□□□ -0.17
PCNX2-222ENST00000520463 WDR97A6NE52 1622 aa13.98□□□□□ -0.17
PCNX2-222ENST00000520463 SYNJ2O15056 1496 aa13.95□□□□□ -0.18
PCNX2-222ENST00000520463 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
PCNX2-222ENST00000520463 KDM4FA0A1W2PPD8 638 aa13.93□□□□□ -0.18
PCNX2-222ENST00000520463 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
PCNX2-222ENST00000520463 FGD5Q6ZNL6 1462 aa13.86□□□□□ -0.19
PCNX2-222ENST00000520463 ERCC6L2Q5T890 1561 aa13.85□□□□□ -0.19
PCNX2-222ENST00000520463 FAM69CQ0P6D2 419 aa13.79□□□□□ -0.2
PCNX2-222ENST00000520463 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
PCNX2-222ENST00000520463 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
PCNX2-222ENST00000520463 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
PCNX2-222ENST00000520463 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms