RNA–Protein interactions for RNA: ENST00000520362.5

EFR3A-204, Transcript of EFR3 homolog A, humanhuman

TSL 3

Gene EFR3A, Length 477 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-204ENST00000520362 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
EFR3A-204ENST00000520362 ABCC9O60706 1549 aa29.84■■■□□ 2.37
EFR3A-204ENST00000520362 CCDC180Q9P1Z9 1646 aa29.79■■■□□ 2.36
EFR3A-204ENST00000520362 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
EFR3A-204ENST00000520362 RB1CC1Q8TDY2 1594 aa28.38■■■□□ 2.13
EFR3A-204ENST00000520362 NACADO15069 1562 aa28.22■■■□□ 2.11
EFR3A-204ENST00000520362 PABPN1Q86U42 306 aaKnown RBP eCLIP27.94■■■□□ 2.06
EFR3A-204ENST00000520362 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
EFR3A-204ENST00000520362 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
EFR3A-204ENST00000520362 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.03
EFR3A-204ENST00000520362 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
EFR3A-204ENST00000520362 UNC13AQ9UPW8 1703 aa27.52■■■□□ 2
EFR3A-204ENST00000520362 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
EFR3A-204ENST00000520362 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
EFR3A-204ENST00000520362 SHROOM4Q9ULL8 1493 aa27.11■■□□□ 1.93
EFR3A-204ENST00000520362 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
EFR3A-204ENST00000520362 CC2D2AQ9P2K1 1620 aa26.83■■□□□ 1.88
EFR3A-204ENST00000520362 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
EFR3A-204ENST00000520362 NCAPD3P42695 1498 aa26.09■■□□□ 1.77
EFR3A-204ENST00000520362 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
EFR3A-204ENST00000520362 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
EFR3A-204ENST00000520362 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
EFR3A-204ENST00000520362 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
EFR3A-204ENST00000520362 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
EFR3A-204ENST00000520362 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
EFR3A-204ENST00000520362 MROH2BQ7Z745 1585 aa25.84■■□□□ 1.73
EFR3A-204ENST00000520362 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
EFR3A-204ENST00000520362 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
EFR3A-204ENST00000520362 NESP48681 1621 aa25.65■■□□□ 1.7
EFR3A-204ENST00000520362 CUX2O14529 1486 aa25.51■■□□□ 1.67
EFR3A-204ENST00000520362 WIZO95785 1651 aa25.5■■□□□ 1.67
EFR3A-204ENST00000520362 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
EFR3A-204ENST00000520362 LAMC3Q9Y6N6 1575 aa25.41■■□□□ 1.66
EFR3A-204ENST00000520362 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
EFR3A-204ENST00000520362 CADPSQ9ULU8 1353 aa25.4■■□□□ 1.66
EFR3A-204ENST00000520362 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
EFR3A-204ENST00000520362 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
EFR3A-204ENST00000520362 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
EFR3A-204ENST00000520362 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
EFR3A-204ENST00000520362 MRC2Q9UBG0 1479 aa25.12■■□□□ 1.61
EFR3A-204ENST00000520362 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
EFR3A-204ENST00000520362 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
EFR3A-204ENST00000520362 CFTRP13569 1480 aa25.08■■□□□ 1.6
EFR3A-204ENST00000520362 CCDC88BA6NC98 1476 aa25■■□□□ 1.59
EFR3A-204ENST00000520362 WDR62O43379 1518 aa24.95■■□□□ 1.58
EFR3A-204ENST00000520362 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
EFR3A-204ENST00000520362 SUPT5HO00267 1087 aaKnown RBP24.79■■□□□ 1.56
EFR3A-204ENST00000520362 PRDM2Q13029 1718 aa24.62■■□□□ 1.53
EFR3A-204ENST00000520362 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
EFR3A-204ENST00000520362 OSCARQ8IYS5 282 aa24.58■■□□□ 1.53
EFR3A-204ENST00000520362 ABCC8Q09428 1581 aa24.58■■□□□ 1.52
EFR3A-204ENST00000520362 IFT140Q96RY7 1462 aa24.57■■□□□ 1.52
EFR3A-204ENST00000520362 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
EFR3A-204ENST00000520362 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
EFR3A-204ENST00000520362 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
EFR3A-204ENST00000520362 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.49
EFR3A-204ENST00000520362 SOGA1O94964 1423 aa24.37■■□□□ 1.49
EFR3A-204ENST00000520362 FBLN2P98095 1184 aa24.37■■□□□ 1.49
EFR3A-204ENST00000520362 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
EFR3A-204ENST00000520362 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
EFR3A-204ENST00000520362 TDRD9Q8NDG6 1382 aaKnown RBP24.32■■□□□ 1.48
EFR3A-204ENST00000520362 FGD5Q6ZNL6 1462 aa24.28■■□□□ 1.48
EFR3A-204ENST00000520362 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
EFR3A-204ENST00000520362 TARBP1Q13395 1621 aaKnown RBP24.26■■□□□ 1.47
EFR3A-204ENST00000520362 CUX1P39880 1505 aa24.25■■□□□ 1.47
EFR3A-204ENST00000520362 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
EFR3A-204ENST00000520362 SNAPC4Q5SXM2 1469 aa24.09■■□□□ 1.45
EFR3A-204ENST00000520362 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
EFR3A-204ENST00000520362 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
EFR3A-204ENST00000520362 CYB5RLQ6IPT4 315 aa24.03■■□□□ 1.44
EFR3A-204ENST00000520362 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
EFR3A-204ENST00000520362 CHD1O14646 1710 aa24.01■■□□□ 1.43
EFR3A-204ENST00000520362 ARHGEF11O15085 1522 aa24■■□□□ 1.43
EFR3A-204ENST00000520362 WDR97A6NE52 1622 aa24■■□□□ 1.43
EFR3A-204ENST00000520362 RIMBP3CA6NJZ7 1639 aa24■■□□□ 1.43
EFR3A-204ENST00000520362 RIMBP3BA6NNM3 1639 aa24■■□□□ 1.43
EFR3A-204ENST00000520362 RIMBP3Q9UFD9 1639 aa24■■□□□ 1.43
EFR3A-204ENST00000520362 MAGI1Q96QZ7 1491 aaPredicted RBP23.99■■□□□ 1.43
EFR3A-204ENST00000520362 ABCA10Q8WWZ4 1543 aa23.97■■□□□ 1.43
EFR3A-204ENST00000520362 SYNJ2O15056 1496 aa23.93■■□□□ 1.42
EFR3A-204ENST00000520362 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
EFR3A-204ENST00000520362 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
EFR3A-204ENST00000520362 BIVM-ERCC5R4GMW8 1640 aa23.83■■□□□ 1.41
EFR3A-204ENST00000520362 ABCA5Q8WWZ7 1642 aa23.82■■□□□ 1.4
EFR3A-204ENST00000520362 PBRM1Q86U86 1689 aa23.82■■□□□ 1.4
EFR3A-204ENST00000520362 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
EFR3A-204ENST00000520362 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
EFR3A-204ENST00000520362 TRHP20396 242 aaPredicted RBP23.76■■□□□ 1.39
EFR3A-204ENST00000520362 FHAD1B1AJZ9 1412 aa23.74■■□□□ 1.39
EFR3A-204ENST00000520362 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
EFR3A-204ENST00000520362 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
EFR3A-204ENST00000520362 ERICH3Q5RHP9 1530 aa23.66■■□□□ 1.38
EFR3A-204ENST00000520362 NUP160Q12769 1436 aa23.6■■□□□ 1.37
EFR3A-204ENST00000520362 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
EFR3A-204ENST00000520362 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
EFR3A-204ENST00000520362 JPH4Q96JJ6 628 aa23.54■■□□□ 1.36
EFR3A-204ENST00000520362 IGF1RP08069 1367 aa23.53■■□□□ 1.36
EFR3A-204ENST00000520362 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
EFR3A-204ENST00000520362 ERCC6L2Q5T890 1561 aa23.48■■□□□ 1.35
EFR3A-204ENST00000520362 CARMIL1Q5VZK9 1371 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms