RNA–Protein interactions for RNA: ENST00000519998.1

CNOT7-207, Transcript of CCR4-NOT transcription complex subunit 7, humanhuman

TSL 2

Gene CNOT7, Length 1,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT7-207ENST00000519998 NISCHQ9Y2I1 1504 aa19.26■□□□□ 0.67
CNOT7-207ENST00000519998 AEBP2Q6ZN18 517 aaPredicted RBP18.52■□□□□ 0.56
CNOT7-207ENST00000519998 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
CNOT7-207ENST00000519998 CCDC180Q9P1Z9 1646 aa16.57■□□□□ 0.24
CNOT7-207ENST00000519998 ZCCHC6Q5VYS8 1495 aaKnown RBP16.2■□□□□ 0.18
CNOT7-207ENST00000519998 SENP3Q9H4L4 574 aaPredicted RBP16.09■□□□□ 0.17
CNOT7-207ENST00000519998 DCAF8L2P0C7V8 631 aa16.07■□□□□ 0.16
CNOT7-207ENST00000519998 SHROOM4Q9ULL8 1493 aa16■□□□□ 0.15
CNOT7-207ENST00000519998 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
CNOT7-207ENST00000519998 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
CNOT7-207ENST00000519998 ABCC9O60706 1549 aa15.78■□□□□ 0.12
CNOT7-207ENST00000519998 PHF23Q9BUL5 403 aaPredicted RBP15.67■□□□□ 0.1
CNOT7-207ENST00000519998 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.09
CNOT7-207ENST00000519998 NACADO15069 1562 aa15.48■□□□□ 0.07
CNOT7-207ENST00000519998 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
CNOT7-207ENST00000519998 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
CNOT7-207ENST00000519998 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
CNOT7-207ENST00000519998 RSF1Q96T23 1441 aaPredicted RBP15.06■□□□□ 0
CNOT7-207ENST00000519998 CECR2Q9BXF3 1484 aa15.03■□□□□ -0
CNOT7-207ENST00000519998 FOXD1Q16676 465 aa15.03■□□□□ -0
CNOT7-207ENST00000519998 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
CNOT7-207ENST00000519998 MROH2BQ7Z745 1585 aa14.93□□□□□ -0.02
CNOT7-207ENST00000519998 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
CNOT7-207ENST00000519998 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
CNOT7-207ENST00000519998 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.04
CNOT7-207ENST00000519998 WIZO95785 1651 aa14.77□□□□□ -0.05
CNOT7-207ENST00000519998 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
CNOT7-207ENST00000519998 TOP2AP11388 1531 aaKnown RBP14.6□□□□□ -0.07
CNOT7-207ENST00000519998 MSH5O43196 834 aa14.56□□□□□ -0.08
CNOT7-207ENST00000519998 CCDC88BA6NC98 1476 aa14.53□□□□□ -0.08
CNOT7-207ENST00000519998 ATAD2BQ9ULI0 1458 aa14.53□□□□□ -0.08
CNOT7-207ENST00000519998 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
CNOT7-207ENST00000519998 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
CNOT7-207ENST00000519998 SMARCA2P51531 1590 aa14.48□□□□□ -0.09
CNOT7-207ENST00000519998 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
CNOT7-207ENST00000519998 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
CNOT7-207ENST00000519998 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
CNOT7-207ENST00000519998 LOC105371045A0A1W2PR82 267 aa14.34□□□□□ -0.11
CNOT7-207ENST00000519998 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
CNOT7-207ENST00000519998 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
CNOT7-207ENST00000519998 ABCC8Q09428 1581 aa14.27□□□□□ -0.12
CNOT7-207ENST00000519998 CC2D2AQ9P2K1 1620 aa14.18□□□□□ -0.14
CNOT7-207ENST00000519998 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
CNOT7-207ENST00000519998 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
CNOT7-207ENST00000519998 SOGA1O94964 1423 aa14.09□□□□□ -0.15
CNOT7-207ENST00000519998 CFTRP13569 1480 aa14.08□□□□□ -0.16
CNOT7-207ENST00000519998 SYNJ1O43426 1573 aa14.06□□□□□ -0.16
CNOT7-207ENST00000519998 CADPSQ9ULU8 1353 aa14.03□□□□□ -0.16
CNOT7-207ENST00000519998 RUSC2Q8N2Y8 1516 aa14.02□□□□□ -0.17
CNOT7-207ENST00000519998 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
CNOT7-207ENST00000519998 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
CNOT7-207ENST00000519998 EEA1Q15075 1411 aa13.97□□□□□ -0.17
CNOT7-207ENST00000519998 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
CNOT7-207ENST00000519998 CUX1P39880 1505 aa13.93□□□□□ -0.18
CNOT7-207ENST00000519998 NESP48681 1621 aa13.89□□□□□ -0.19
CNOT7-207ENST00000519998 BIVM-ERCC5R4GMW8 1640 aa13.89□□□□□ -0.19
CNOT7-207ENST00000519998 FANCD2Q9BXW9 1451 aa13.87□□□□□ -0.19
CNOT7-207ENST00000519998 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
CNOT7-207ENST00000519998 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
CNOT7-207ENST00000519998 PCGF6Q9BYE7 350 aa13.83□□□□□ -0.2
CNOT7-207ENST00000519998 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
CNOT7-207ENST00000519998 PIAS4Q8N2W9 510 aaPredicted RBP13.81□□□□□ -0.2
CNOT7-207ENST00000519998 CEP164Q9UPV0 1460 aa13.81□□□□□ -0.2
CNOT7-207ENST00000519998 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
CNOT7-207ENST00000519998 CEP162Q5TB80 1403 aa13.79□□□□□ -0.2
CNOT7-207ENST00000519998 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
CNOT7-207ENST00000519998 FGD5Q6ZNL6 1462 aa13.77□□□□□ -0.21
CNOT7-207ENST00000519998 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
CNOT7-207ENST00000519998 RAPGEF2Q9Y4G8 1499 aa13.76□□□□□ -0.21
CNOT7-207ENST00000519998 KIF21BO75037 1637 aa13.75□□□□□ -0.21
CNOT7-207ENST00000519998 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
CNOT7-207ENST00000519998 CUX2O14529 1486 aa13.73□□□□□ -0.21
CNOT7-207ENST00000519998 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
CNOT7-207ENST00000519998 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
CNOT7-207ENST00000519998 PRXQ9BXM0 1461 aa13.71□□□□□ -0.21
CNOT7-207ENST00000519998 DNMBPQ6XZF7 1577 aa13.71□□□□□ -0.21
CNOT7-207ENST00000519998 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
CNOT7-207ENST00000519998 RANGAP1P46060 587 aaPredicted RBP13.68□□□□□ -0.22
CNOT7-207ENST00000519998 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
CNOT7-207ENST00000519998 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
CNOT7-207ENST00000519998 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
CNOT7-207ENST00000519998 IGF1RP08069 1367 aa13.68□□□□□ -0.22
CNOT7-207ENST00000519998 CLIP1P30622 1438 aa13.65□□□□□ -0.22
CNOT7-207ENST00000519998 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
CNOT7-207ENST00000519998 ABCA10Q8WWZ4 1543 aa13.61□□□□□ -0.23
CNOT7-207ENST00000519998 CARMIL1Q5VZK9 1371 aa13.61□□□□□ -0.23
CNOT7-207ENST00000519998 PLPPR3Q6T4P5 718 aa13.59□□□□□ -0.23
CNOT7-207ENST00000519998 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
CNOT7-207ENST00000519998 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.24
CNOT7-207ENST00000519998 TDRD9Q8NDG6 1382 aaKnown RBP13.57□□□□□ -0.24
CNOT7-207ENST00000519998 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
CNOT7-207ENST00000519998 VPS8Q8N3P4 1428 aa13.53□□□□□ -0.24
CNOT7-207ENST00000519998 HRCP23327 699 aa13.51□□□□□ -0.25
CNOT7-207ENST00000519998 GAPVD1Q14C86 1478 aa13.49□□□□□ -0.25
CNOT7-207ENST00000519998 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
CNOT7-207ENST00000519998 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
CNOT7-207ENST00000519998 WDR97A6NE52 1622 aa13.46□□□□□ -0.25
CNOT7-207ENST00000519998 APLP2Q06481 763 aa13.45□□□□□ -0.26
CNOT7-207ENST00000519998 TARBP1Q13395 1621 aaKnown RBP13.45□□□□□ -0.26
CNOT7-207ENST00000519998 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms