RNA–Protein interactions for RNA: ENST00000519932.5

LAMA4-213, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-213ENST00000519932 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.27
LAMA4-213ENST00000519932 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
LAMA4-213ENST00000519932 ABCC9O60706 1549 aa30.7■■■□□ 2.51
LAMA4-213ENST00000519932 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
LAMA4-213ENST00000519932 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
LAMA4-213ENST00000519932 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
LAMA4-213ENST00000519932 NACADO15069 1562 aa29.56■■■□□ 2.32
LAMA4-213ENST00000519932 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
LAMA4-213ENST00000519932 DCAF1Q9Y4B6 1507 aa29.32■■■□□ 2.28
LAMA4-213ENST00000519932 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
LAMA4-213ENST00000519932 SCRIBQ14160 1630 aa28.88■■■□□ 2.21
LAMA4-213ENST00000519932 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
LAMA4-213ENST00000519932 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
LAMA4-213ENST00000519932 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
LAMA4-213ENST00000519932 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
LAMA4-213ENST00000519932 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
LAMA4-213ENST00000519932 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
LAMA4-213ENST00000519932 CECR2Q9BXF3 1484 aa27.64■■■□□ 2.02
LAMA4-213ENST00000519932 SMARCA4P51532 1647 aa27.57■■■□□ 2
LAMA4-213ENST00000519932 BAZ1AQ9NRL2 1556 aaPredicted RBP27.55■■■□□ 2
LAMA4-213ENST00000519932 MROH2BQ7Z745 1585 aa27.39■■□□□ 1.97
LAMA4-213ENST00000519932 SMARCA2P51531 1590 aa27.32■■□□□ 1.96
LAMA4-213ENST00000519932 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
LAMA4-213ENST00000519932 NCAPD3P42695 1498 aa27.2■■□□□ 1.95
LAMA4-213ENST00000519932 PEG3Q9GZU2 1588 aa27.2■■□□□ 1.94
LAMA4-213ENST00000519932 WIZO95785 1651 aa27.19■■□□□ 1.94
LAMA4-213ENST00000519932 BAZ1BQ9UIG0 1483 aaKnown RBP27.17■■□□□ 1.94
LAMA4-213ENST00000519932 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
LAMA4-213ENST00000519932 RSF1Q96T23 1441 aaPredicted RBP27.11■■□□□ 1.93
LAMA4-213ENST00000519932 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
LAMA4-213ENST00000519932 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
LAMA4-213ENST00000519932 NESP48681 1621 aa26.6■■□□□ 1.85
LAMA4-213ENST00000519932 LAMC3Q9Y6N6 1575 aa26.55■■□□□ 1.84
LAMA4-213ENST00000519932 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
LAMA4-213ENST00000519932 ERCC6Q03468 1493 aa26.49■■□□□ 1.83
LAMA4-213ENST00000519932 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
LAMA4-213ENST00000519932 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
LAMA4-213ENST00000519932 PRDM2Q13029 1718 aa26.35■■□□□ 1.81
LAMA4-213ENST00000519932 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
LAMA4-213ENST00000519932 CFTRP13569 1480 aa26.33■■□□□ 1.81
LAMA4-213ENST00000519932 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
LAMA4-213ENST00000519932 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
LAMA4-213ENST00000519932 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
LAMA4-213ENST00000519932 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
LAMA4-213ENST00000519932 CUX2O14529 1486 aa26.02■■□□□ 1.76
LAMA4-213ENST00000519932 WDR62O43379 1518 aa25.97■■□□□ 1.75
LAMA4-213ENST00000519932 URB2Q14146 1524 aaKnown RBP25.92■■□□□ 1.74
LAMA4-213ENST00000519932 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
LAMA4-213ENST00000519932 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
LAMA4-213ENST00000519932 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
LAMA4-213ENST00000519932 CUX1P39880 1505 aa25.69■■□□□ 1.7
LAMA4-213ENST00000519932 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
LAMA4-213ENST00000519932 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
LAMA4-213ENST00000519932 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
LAMA4-213ENST00000519932 IFT140Q96RY7 1462 aa25.59■■□□□ 1.69
LAMA4-213ENST00000519932 SYNJ1O43426 1573 aa25.57■■□□□ 1.68
LAMA4-213ENST00000519932 BIVM-ERCC5R4GMW8 1640 aa25.56■■□□□ 1.68
LAMA4-213ENST00000519932 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
LAMA4-213ENST00000519932 SOGA1O94964 1423 aa25.51■■□□□ 1.67
LAMA4-213ENST00000519932 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
LAMA4-213ENST00000519932 TARBP1Q13395 1621 aaKnown RBP25.51■■□□□ 1.67
LAMA4-213ENST00000519932 ZNF608Q9ULD9 1512 aaPredicted RBP25.46■■□□□ 1.67
LAMA4-213ENST00000519932 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
LAMA4-213ENST00000519932 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
LAMA4-213ENST00000519932 AQRO60306 1485 aaKnown RBP eCLIP25.35■■□□□ 1.65
LAMA4-213ENST00000519932 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
LAMA4-213ENST00000519932 ABCA10Q8WWZ4 1543 aa25.31■■□□□ 1.64
LAMA4-213ENST00000519932 PBRM1Q86U86 1689 aa25.28■■□□□ 1.64
LAMA4-213ENST00000519932 ABCA5Q8WWZ7 1642 aa25.23■■□□□ 1.63
LAMA4-213ENST00000519932 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
LAMA4-213ENST00000519932 TRIM41Q8WV44 630 aa25.21■■□□□ 1.63
LAMA4-213ENST00000519932 GRIN2BQ13224 1484 aa25.18■■□□□ 1.62
LAMA4-213ENST00000519932 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
LAMA4-213ENST00000519932 CHD1O14646 1710 aa25.15■■□□□ 1.62
LAMA4-213ENST00000519932 FBLN2P98095 1184 aa25.12■■□□□ 1.61
LAMA4-213ENST00000519932 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
LAMA4-213ENST00000519932 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
LAMA4-213ENST00000519932 ERICH3Q5RHP9 1530 aa25.02■■□□□ 1.6
LAMA4-213ENST00000519932 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
LAMA4-213ENST00000519932 OSCARQ8IYS5 282 aa25■■□□□ 1.59
LAMA4-213ENST00000519932 ADAMTS12P58397 1594 aa25■■□□□ 1.59
LAMA4-213ENST00000519932 SYNJ2O15056 1496 aa24.99■■□□□ 1.59
LAMA4-213ENST00000519932 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
LAMA4-213ENST00000519932 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
LAMA4-213ENST00000519932 CUL7Q14999 1698 aa24.92■■□□□ 1.58
LAMA4-213ENST00000519932 FHAD1B1AJZ9 1412 aa24.91■■□□□ 1.58
LAMA4-213ENST00000519932 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
LAMA4-213ENST00000519932 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
LAMA4-213ENST00000519932 IGF1RP08069 1367 aa24.86■■□□□ 1.57
LAMA4-213ENST00000519932 CARMIL1Q5VZK9 1371 aa24.78■■□□□ 1.56
LAMA4-213ENST00000519932 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
LAMA4-213ENST00000519932 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
LAMA4-213ENST00000519932 CLASP1Q7Z460 1538 aa24.73■■□□□ 1.55
LAMA4-213ENST00000519932 EEA1Q15075 1411 aa24.69■■□□□ 1.54
LAMA4-213ENST00000519932 NUP160Q12769 1436 aa24.68■■□□□ 1.54
LAMA4-213ENST00000519932 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
LAMA4-213ENST00000519932 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
LAMA4-213ENST00000519932 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.53
LAMA4-213ENST00000519932 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.53
LAMA4-213ENST00000519932 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms