RNA–Protein interactions for RNA: ENST00000519717.1

HGNC:24955-204, humanhuman

TSL 1 (best)

Gene HGNC:24955, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGNC:24955-204ENST00000519717 NISCHQ9Y2I1 1504 aa28.85■■■□□ 2.21
HGNC:24955-204ENST00000519717 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
HGNC:24955-204ENST00000519717 ABCC9O60706 1549 aa24.45■■□□□ 1.51
HGNC:24955-204ENST00000519717 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
HGNC:24955-204ENST00000519717 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
HGNC:24955-204ENST00000519717 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
HGNC:24955-204ENST00000519717 MYO15BQ96JP2 1530 aa23.8■■□□□ 1.4
HGNC:24955-204ENST00000519717 NACADO15069 1562 aa23.78■■□□□ 1.4
HGNC:24955-204ENST00000519717 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
HGNC:24955-204ENST00000519717 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
HGNC:24955-204ENST00000519717 UNC13AQ9UPW8 1703 aa23.16■■□□□ 1.3
HGNC:24955-204ENST00000519717 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
HGNC:24955-204ENST00000519717 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
HGNC:24955-204ENST00000519717 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
HGNC:24955-204ENST00000519717 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
HGNC:24955-204ENST00000519717 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
HGNC:24955-204ENST00000519717 BAZ1AQ9NRL2 1556 aaPredicted RBP22.31■■□□□ 1.16
HGNC:24955-204ENST00000519717 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
HGNC:24955-204ENST00000519717 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
HGNC:24955-204ENST00000519717 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
HGNC:24955-204ENST00000519717 CC2D2AQ9P2K1 1620 aa22.13■■□□□ 1.13
HGNC:24955-204ENST00000519717 PEG3Q9GZU2 1588 aa22.07■■□□□ 1.12
HGNC:24955-204ENST00000519717 ATAD2BQ9ULI0 1458 aa22.05■■□□□ 1.12
HGNC:24955-204ENST00000519717 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
HGNC:24955-204ENST00000519717 WIZO95785 1651 aa22.03■■□□□ 1.12
HGNC:24955-204ENST00000519717 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
HGNC:24955-204ENST00000519717 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
HGNC:24955-204ENST00000519717 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
HGNC:24955-204ENST00000519717 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
HGNC:24955-204ENST00000519717 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
HGNC:24955-204ENST00000519717 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.09
HGNC:24955-204ENST00000519717 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
HGNC:24955-204ENST00000519717 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
HGNC:24955-204ENST00000519717 CFTRP13569 1480 aa21.32■■□□□ 1
HGNC:24955-204ENST00000519717 NESP48681 1621 aa21.32■■□□□ 1
HGNC:24955-204ENST00000519717 LAMC3Q9Y6N6 1575 aa21.28■■□□□ 1
HGNC:24955-204ENST00000519717 PRDM2Q13029 1718 aa21.15■□□□□ 0.98
HGNC:24955-204ENST00000519717 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
HGNC:24955-204ENST00000519717 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
HGNC:24955-204ENST00000519717 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
HGNC:24955-204ENST00000519717 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
HGNC:24955-204ENST00000519717 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
HGNC:24955-204ENST00000519717 ABCC8Q09428 1581 aa20.94■□□□□ 0.94
HGNC:24955-204ENST00000519717 MRC2Q9UBG0 1479 aa20.91■□□□□ 0.94
HGNC:24955-204ENST00000519717 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
HGNC:24955-204ENST00000519717 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
HGNC:24955-204ENST00000519717 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
HGNC:24955-204ENST00000519717 CUX1P39880 1505 aa20.86■□□□□ 0.93
HGNC:24955-204ENST00000519717 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
HGNC:24955-204ENST00000519717 DNMBPQ6XZF7 1577 aa20.83■□□□□ 0.92
HGNC:24955-204ENST00000519717 WDR62O43379 1518 aa20.83■□□□□ 0.92
HGNC:24955-204ENST00000519717 TOPBP1Q92547 1522 aa20.83■□□□□ 0.92
HGNC:24955-204ENST00000519717 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
HGNC:24955-204ENST00000519717 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
HGNC:24955-204ENST00000519717 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.92
HGNC:24955-204ENST00000519717 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
HGNC:24955-204ENST00000519717 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
HGNC:24955-204ENST00000519717 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
HGNC:24955-204ENST00000519717 CUX2O14529 1486 aa20.64■□□□□ 0.89
HGNC:24955-204ENST00000519717 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
HGNC:24955-204ENST00000519717 SOGA1O94964 1423 aa20.59■□□□□ 0.89
HGNC:24955-204ENST00000519717 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
HGNC:24955-204ENST00000519717 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
HGNC:24955-204ENST00000519717 ABCA10Q8WWZ4 1543 aa20.52■□□□□ 0.87
HGNC:24955-204ENST00000519717 WDR97A6NE52 1622 aa20.5■□□□□ 0.87
HGNC:24955-204ENST00000519717 ZNF608Q9ULD9 1512 aaPredicted RBP20.46■□□□□ 0.87
HGNC:24955-204ENST00000519717 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
HGNC:24955-204ENST00000519717 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
HGNC:24955-204ENST00000519717 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
HGNC:24955-204ENST00000519717 AQRO60306 1485 aaKnown RBP eCLIP20.39■□□□□ 0.85
HGNC:24955-204ENST00000519717 KIF27Q86VH2 1401 aa20.39■□□□□ 0.85
HGNC:24955-204ENST00000519717 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
HGNC:24955-204ENST00000519717 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
HGNC:24955-204ENST00000519717 EEA1Q15075 1411 aa20.31■□□□□ 0.84
HGNC:24955-204ENST00000519717 GRIN2BQ13224 1484 aa20.3■□□□□ 0.84
HGNC:24955-204ENST00000519717 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
HGNC:24955-204ENST00000519717 IGF1RP08069 1367 aa20.28■□□□□ 0.84
HGNC:24955-204ENST00000519717 PBRM1Q86U86 1689 aa20.27■□□□□ 0.84
HGNC:24955-204ENST00000519717 ERICH3Q5RHP9 1530 aa20.27■□□□□ 0.83
HGNC:24955-204ENST00000519717 CSRNP3Q8WYN3 585 aa20.22■□□□□ 0.83
HGNC:24955-204ENST00000519717 SNAPC4Q5SXM2 1469 aa20.22■□□□□ 0.83
HGNC:24955-204ENST00000519717 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
HGNC:24955-204ENST00000519717 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
HGNC:24955-204ENST00000519717 CUL7Q14999 1698 aa20.16■□□□□ 0.82
HGNC:24955-204ENST00000519717 CARMIL1Q5VZK9 1371 aa20.15■□□□□ 0.82
HGNC:24955-204ENST00000519717 PRXQ9BXM0 1461 aa20.15■□□□□ 0.82
HGNC:24955-204ENST00000519717 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
HGNC:24955-204ENST00000519717 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
HGNC:24955-204ENST00000519717 KIF21BO75037 1637 aa20.09■□□□□ 0.81
HGNC:24955-204ENST00000519717 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.81
HGNC:24955-204ENST00000519717 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
HGNC:24955-204ENST00000519717 CHMP7Q8WUX9 453 aaPredicted RBP20.03■□□□□ 0.8
HGNC:24955-204ENST00000519717 CHD1O14646 1710 aa20.02■□□□□ 0.79
HGNC:24955-204ENST00000519717 FBLN2P98095 1184 aa20.01■□□□□ 0.79
HGNC:24955-204ENST00000519717 GOLGA3Q08378 1498 aa20■□□□□ 0.79
HGNC:24955-204ENST00000519717 EHMT2Q96KQ7 1210 aa19.98■□□□□ 0.79
HGNC:24955-204ENST00000519717 NUP160Q12769 1436 aa19.94■□□□□ 0.78
HGNC:24955-204ENST00000519717 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
HGNC:24955-204ENST00000519717 CEP170Q5SW79 1584 aa19.94■□□□□ 0.78
HGNC:24955-204ENST00000519717 UBTFP17480 764 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms