RNA–Protein interactions for RNA: ENST00000519567.5

ERGIC1-204, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 4

Gene ERGIC1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-204ENST00000519567 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
ERGIC1-204ENST00000519567 CCDC180Q9P1Z9 1646 aa22.77■■□□□ 1.24
ERGIC1-204ENST00000519567 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
ERGIC1-204ENST00000519567 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
ERGIC1-204ENST00000519567 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
ERGIC1-204ENST00000519567 ABCC9O60706 1549 aa21.44■■□□□ 1.02
ERGIC1-204ENST00000519567 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
ERGIC1-204ENST00000519567 NACADO15069 1562 aa21.21■□□□□ 0.99
ERGIC1-204ENST00000519567 SHROOM4Q9ULL8 1493 aa21.09■□□□□ 0.97
ERGIC1-204ENST00000519567 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
ERGIC1-204ENST00000519567 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
ERGIC1-204ENST00000519567 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
ERGIC1-204ENST00000519567 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
ERGIC1-204ENST00000519567 BICRAQ9NZM4 1560 aa20.32■□□□□ 0.84
ERGIC1-204ENST00000519567 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
ERGIC1-204ENST00000519567 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
ERGIC1-204ENST00000519567 RSF1Q96T23 1441 aaPredicted RBP20.15■□□□□ 0.82
ERGIC1-204ENST00000519567 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
ERGIC1-204ENST00000519567 MROH2BQ7Z745 1585 aa20.06■□□□□ 0.8
ERGIC1-204ENST00000519567 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
ERGIC1-204ENST00000519567 WIZO95785 1651 aa19.91■□□□□ 0.78
ERGIC1-204ENST00000519567 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
ERGIC1-204ENST00000519567 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
ERGIC1-204ENST00000519567 SMARCA2P51531 1590 aa19.72■□□□□ 0.75
ERGIC1-204ENST00000519567 EIF4G1Q04637 1599 aaKnown RBP19.71■□□□□ 0.75
ERGIC1-204ENST00000519567 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
ERGIC1-204ENST00000519567 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
ERGIC1-204ENST00000519567 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
ERGIC1-204ENST00000519567 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
ERGIC1-204ENST00000519567 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
ERGIC1-204ENST00000519567 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
ERGIC1-204ENST00000519567 CC2D2AQ9P2K1 1620 aa19.43■□□□□ 0.7
ERGIC1-204ENST00000519567 TRIM41Q8WV44 630 aa19.19■□□□□ 0.66
ERGIC1-204ENST00000519567 CFTRP13569 1480 aa19.09■□□□□ 0.65
ERGIC1-204ENST00000519567 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
ERGIC1-204ENST00000519567 CADPSQ9ULU8 1353 aa19.04■□□□□ 0.64
ERGIC1-204ENST00000519567 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
ERGIC1-204ENST00000519567 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
ERGIC1-204ENST00000519567 LAMC3Q9Y6N6 1575 aa18.9■□□□□ 0.62
ERGIC1-204ENST00000519567 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
ERGIC1-204ENST00000519567 SYNJ1O43426 1573 aa18.86■□□□□ 0.61
ERGIC1-204ENST00000519567 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
ERGIC1-204ENST00000519567 BIVM-ERCC5R4GMW8 1640 aa18.85■□□□□ 0.61
ERGIC1-204ENST00000519567 FANCD2Q9BXW9 1451 aa18.8■□□□□ 0.6
ERGIC1-204ENST00000519567 NESP48681 1621 aa18.79■□□□□ 0.6
ERGIC1-204ENST00000519567 EEA1Q15075 1411 aa18.78■□□□□ 0.6
ERGIC1-204ENST00000519567 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
ERGIC1-204ENST00000519567 CUX1P39880 1505 aa18.76■□□□□ 0.59
ERGIC1-204ENST00000519567 FAM9AQ8IZU1 332 aaPredicted RBP18.76■□□□□ 0.59
ERGIC1-204ENST00000519567 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
ERGIC1-204ENST00000519567 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
ERGIC1-204ENST00000519567 SOGA1O94964 1423 aa18.68■□□□□ 0.58
ERGIC1-204ENST00000519567 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
ERGIC1-204ENST00000519567 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
ERGIC1-204ENST00000519567 KIF21AQ7Z4S6 1674 aa18.62■□□□□ 0.57
ERGIC1-204ENST00000519567 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
ERGIC1-204ENST00000519567 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
ERGIC1-204ENST00000519567 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
ERGIC1-204ENST00000519567 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
ERGIC1-204ENST00000519567 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
ERGIC1-204ENST00000519567 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
ERGIC1-204ENST00000519567 KIF21BO75037 1637 aa18.49■□□□□ 0.55
ERGIC1-204ENST00000519567 POLA1P09884 1462 aaPredicted RBP18.48■□□□□ 0.55
ERGIC1-204ENST00000519567 CUX2O14529 1486 aa18.46■□□□□ 0.54
ERGIC1-204ENST00000519567 GOLGA3Q08378 1498 aa18.46■□□□□ 0.54
ERGIC1-204ENST00000519567 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
ERGIC1-204ENST00000519567 EHMT2Q96KQ7 1210 aa18.43■□□□□ 0.54
ERGIC1-204ENST00000519567 ERCC6Q03468 1493 aa18.42■□□□□ 0.54
ERGIC1-204ENST00000519567 TNIKQ9UKE5 1360 aa18.42■□□□□ 0.54
ERGIC1-204ENST00000519567 RAD54L2Q9Y4B4 1467 aa18.4■□□□□ 0.54
ERGIC1-204ENST00000519567 UBTFP17480 764 aaKnown RBP18.38■□□□□ 0.53
ERGIC1-204ENST00000519567 PRXQ9BXM0 1461 aa18.38■□□□□ 0.53
ERGIC1-204ENST00000519567 WDR62O43379 1518 aa18.38■□□□□ 0.53
ERGIC1-204ENST00000519567 ERICH3Q5RHP9 1530 aa18.37■□□□□ 0.53
ERGIC1-204ENST00000519567 WDR97A6NE52 1622 aa18.37■□□□□ 0.53
ERGIC1-204ENST00000519567 IGF1RP08069 1367 aa18.36■□□□□ 0.53
ERGIC1-204ENST00000519567 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.52
ERGIC1-204ENST00000519567 RAPGEF2Q9Y4G8 1499 aa18.32■□□□□ 0.52
ERGIC1-204ENST00000519567 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
ERGIC1-204ENST00000519567 CARMIL1Q5VZK9 1371 aa18.29■□□□□ 0.52
ERGIC1-204ENST00000519567 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.52
ERGIC1-204ENST00000519567 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
ERGIC1-204ENST00000519567 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
ERGIC1-204ENST00000519567 CUL7Q14999 1698 aa18.25■□□□□ 0.51
ERGIC1-204ENST00000519567 CEP162Q5TB80 1403 aa18.25■□□□□ 0.51
ERGIC1-204ENST00000519567 TDRD9Q8NDG6 1382 aaKnown RBP18.24■□□□□ 0.51
ERGIC1-204ENST00000519567 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
ERGIC1-204ENST00000519567 CLIP1P30622 1438 aa18.15■□□□□ 0.5
ERGIC1-204ENST00000519567 GRIN2BQ13224 1484 aa18.14■□□□□ 0.49
ERGIC1-204ENST00000519567 AQRO60306 1485 aaKnown RBP eCLIP18.13■□□□□ 0.49
ERGIC1-204ENST00000519567 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
ERGIC1-204ENST00000519567 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
ERGIC1-204ENST00000519567 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
ERGIC1-204ENST00000519567 CTTNBP2Q8WZ74 1663 aa18.04■□□□□ 0.48
ERGIC1-204ENST00000519567 ADAMTS12P58397 1594 aa18.03■□□□□ 0.48
ERGIC1-204ENST00000519567 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
ERGIC1-204ENST00000519567 MAGI1Q96QZ7 1491 aaPredicted RBP17.99■□□□□ 0.47
ERGIC1-204ENST00000519567 VPS8Q8N3P4 1428 aa17.98■□□□□ 0.47
ERGIC1-204ENST00000519567 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
ERGIC1-204ENST00000519567 ARHGAP35Q9NRY4 1499 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms