RNA–Protein interactions for RNA: ENST00000519342.1

RNF19A-204, Transcript of ring finger protein 19A, RBR E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RNF19A, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19A-204ENST00000519342 NISCHQ9Y2I1 1504 aa37.13■■■■□ 3.53
RNF19A-204ENST00000519342 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
RNF19A-204ENST00000519342 ABCC9O60706 1549 aa32.26■■■□□ 2.76
RNF19A-204ENST00000519342 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
RNF19A-204ENST00000519342 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
RNF19A-204ENST00000519342 NACADO15069 1562 aa31.1■■■□□ 2.57
RNF19A-204ENST00000519342 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
RNF19A-204ENST00000519342 ZCCHC6Q5VYS8 1495 aaKnown RBP30.9■■■□□ 2.54
RNF19A-204ENST00000519342 DCAF1Q9Y4B6 1507 aa30.78■■■□□ 2.52
RNF19A-204ENST00000519342 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
RNF19A-204ENST00000519342 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
RNF19A-204ENST00000519342 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
RNF19A-204ENST00000519342 BICRAQ9NZM4 1560 aa30.01■■■□□ 2.39
RNF19A-204ENST00000519342 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
RNF19A-204ENST00000519342 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
RNF19A-204ENST00000519342 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
RNF19A-204ENST00000519342 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
RNF19A-204ENST00000519342 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
RNF19A-204ENST00000519342 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
RNF19A-204ENST00000519342 SMARCA4P51532 1647 aa28.77■■■□□ 2.2
RNF19A-204ENST00000519342 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
RNF19A-204ENST00000519342 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
RNF19A-204ENST00000519342 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
RNF19A-204ENST00000519342 MROH2BQ7Z745 1585 aa28.55■■■□□ 2.16
RNF19A-204ENST00000519342 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
RNF19A-204ENST00000519342 HMGXB3Q12766 1538 aa28.52■■■□□ 2.16
RNF19A-204ENST00000519342 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
RNF19A-204ENST00000519342 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
RNF19A-204ENST00000519342 WIZO95785 1651 aa28.22■■■□□ 2.11
RNF19A-204ENST00000519342 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
RNF19A-204ENST00000519342 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
RNF19A-204ENST00000519342 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
RNF19A-204ENST00000519342 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
RNF19A-204ENST00000519342 NESP48681 1621 aa27.86■■■□□ 2.05
RNF19A-204ENST00000519342 PDS5BQ9NTI5 1447 aa27.83■■■□□ 2.05
RNF19A-204ENST00000519342 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
RNF19A-204ENST00000519342 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
RNF19A-204ENST00000519342 CFTRP13569 1480 aa27.67■■■□□ 2.02
RNF19A-204ENST00000519342 CUX2O14529 1486 aa27.62■■■□□ 2.01
RNF19A-204ENST00000519342 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
RNF19A-204ENST00000519342 KIF21AQ7Z4S6 1674 aa27.51■■□□□ 1.99
RNF19A-204ENST00000519342 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
RNF19A-204ENST00000519342 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
RNF19A-204ENST00000519342 THOC2Q8NI27 1593 aaKnown RBP27.43■■□□□ 1.98
RNF19A-204ENST00000519342 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
RNF19A-204ENST00000519342 WDR62O43379 1518 aa27.31■■□□□ 1.96
RNF19A-204ENST00000519342 ABCC8Q09428 1581 aa27.2■■□□□ 1.94
RNF19A-204ENST00000519342 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
RNF19A-204ENST00000519342 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
RNF19A-204ENST00000519342 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
RNF19A-204ENST00000519342 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
RNF19A-204ENST00000519342 DNAJC5Q9H3Z4 198 aa26.89■■□□□ 1.9
RNF19A-204ENST00000519342 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
RNF19A-204ENST00000519342 SOGA1O94964 1423 aa26.79■■□□□ 1.88
RNF19A-204ENST00000519342 CUX1P39880 1505 aa26.79■■□□□ 1.88
RNF19A-204ENST00000519342 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
RNF19A-204ENST00000519342 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
RNF19A-204ENST00000519342 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
RNF19A-204ENST00000519342 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
RNF19A-204ENST00000519342 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
RNF19A-204ENST00000519342 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
RNF19A-204ENST00000519342 AQRO60306 1485 aaKnown RBP eCLIP26.61■■□□□ 1.852e-14■■■■■ 28.7
RNF19A-204ENST00000519342 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
RNF19A-204ENST00000519342 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
RNF19A-204ENST00000519342 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
RNF19A-204ENST00000519342 OSCARQ8IYS5 282 aa26.57■■□□□ 1.84
RNF19A-204ENST00000519342 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
RNF19A-204ENST00000519342 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
RNF19A-204ENST00000519342 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
RNF19A-204ENST00000519342 GRIN2BQ13224 1484 aa26.47■■□□□ 1.83
RNF19A-204ENST00000519342 GAPVD1Q14C86 1478 aa26.45■■□□□ 1.82
RNF19A-204ENST00000519342 FBLN2P98095 1184 aa26.42■■□□□ 1.82
RNF19A-204ENST00000519342 MAGI1Q96QZ7 1491 aaPredicted RBP26.39■■□□□ 1.82
RNF19A-204ENST00000519342 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
RNF19A-204ENST00000519342 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
RNF19A-204ENST00000519342 ABCA5Q8WWZ7 1642 aa26.33■■□□□ 1.81
RNF19A-204ENST00000519342 SYNJ2O15056 1496 aa26.28■■□□□ 1.8
RNF19A-204ENST00000519342 PBRM1Q86U86 1689 aa26.27■■□□□ 1.8
RNF19A-204ENST00000519342 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
RNF19A-204ENST00000519342 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
RNF19A-204ENST00000519342 CHD1O14646 1710 aa26.22■■□□□ 1.79
RNF19A-204ENST00000519342 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
RNF19A-204ENST00000519342 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
RNF19A-204ENST00000519342 ADAMTS12P58397 1594 aa26.09■■□□□ 1.77
RNF19A-204ENST00000519342 GRIN2AQ12879 1464 aa26.08■■□□□ 1.77
RNF19A-204ENST00000519342 IGF1RP08069 1367 aa26.06■■□□□ 1.76
RNF19A-204ENST00000519342 CUL7Q14999 1698 aa25.98■■□□□ 1.75
RNF19A-204ENST00000519342 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
RNF19A-204ENST00000519342 ARHGEF11O15085 1522 aa25.96■■□□□ 1.75
RNF19A-204ENST00000519342 NUP160Q12769 1436 aa25.96■■□□□ 1.75
RNF19A-204ENST00000519342 CARMIL1Q5VZK9 1371 aa25.95■■□□□ 1.74
RNF19A-204ENST00000519342 RIMBP3CA6NJZ7 1639 aa25.92■■□□□ 1.74
RNF19A-204ENST00000519342 RIMBP3BA6NNM3 1639 aa25.92■■□□□ 1.74
RNF19A-204ENST00000519342 RIMBP3Q9UFD9 1639 aa25.92■■□□□ 1.74
RNF19A-204ENST00000519342 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
RNF19A-204ENST00000519342 CYB5RLQ6IPT4 315 aa25.83■■□□□ 1.73
RNF19A-204ENST00000519342 JPH4Q96JJ6 628 aa25.8■■□□□ 1.72
RNF19A-204ENST00000519342 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
RNF19A-204ENST00000519342 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
RNF19A-204ENST00000519342 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms