RNA–Protein interactions for RNA: ENST00000519047.5

HMBOX1-206, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-206ENST00000519047 NISCHQ9Y2I1 1504 aa15.49■□□□□ 0.07
HMBOX1-206ENST00000519047 CHIC1Q5VXU3 224 aa15.09■□□□□ 0.01
HMBOX1-206ENST00000519047 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
HMBOX1-206ENST00000519047 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
HMBOX1-206ENST00000519047 ABCC9O60706 1549 aa13.34□□□□□ -0.27
HMBOX1-206ENST00000519047 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
HMBOX1-206ENST00000519047 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
HMBOX1-206ENST00000519047 NACADO15069 1562 aa12.9□□□□□ -0.34
HMBOX1-206ENST00000519047 DCAF8L2P0C7V8 631 aa12.88□□□□□ -0.35
HMBOX1-206ENST00000519047 RB1CC1Q8TDY2 1594 aa12.88□□□□□ -0.35
HMBOX1-206ENST00000519047 MYO15BQ96JP2 1530 aa12.87□□□□□ -0.35
HMBOX1-206ENST00000519047 DCAF1Q9Y4B6 1507 aa12.83□□□□□ -0.36
HMBOX1-206ENST00000519047 SENP3Q9H4L4 574 aaPredicted RBP12.77□□□□□ -0.36
HMBOX1-206ENST00000519047 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
HMBOX1-206ENST00000519047 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.41
HMBOX1-206ENST00000519047 SCRIBQ14160 1630 aa12.5□□□□□ -0.41
HMBOX1-206ENST00000519047 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMBOX1-206ENST00000519047 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
HMBOX1-206ENST00000519047 SHROOM4Q9ULL8 1493 aa12.36□□□□□ -0.43
HMBOX1-206ENST00000519047 DNAJC5BQ9UF47 199 aa12.22□□□□□ -0.45
HMBOX1-206ENST00000519047 EIF4G1Q04637 1599 aaKnown RBP12.16□□□□□ -0.46
HMBOX1-206ENST00000519047 CC2D2AQ9P2K1 1620 aa12.09□□□□□ -0.47
HMBOX1-206ENST00000519047 CECR2Q9BXF3 1484 aa12.06□□□□□ -0.48
HMBOX1-206ENST00000519047 SMARCA4P51532 1647 aa12□□□□□ -0.49
HMBOX1-206ENST00000519047 BAZ1AQ9NRL2 1556 aaPredicted RBP11.99□□□□□ -0.49
HMBOX1-206ENST00000519047 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
HMBOX1-206ENST00000519047 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
HMBOX1-206ENST00000519047 ATAD2BQ9ULI0 1458 aa11.92□□□□□ -0.5
HMBOX1-206ENST00000519047 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
HMBOX1-206ENST00000519047 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
HMBOX1-206ENST00000519047 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
HMBOX1-206ENST00000519047 RSF1Q96T23 1441 aaPredicted RBP11.83□□□□□ -0.52
HMBOX1-206ENST00000519047 WIZO95785 1651 aa11.81□□□□□ -0.52
HMBOX1-206ENST00000519047 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
HMBOX1-206ENST00000519047 FOXD1Q16676 465 aa11.78□□□□□ -0.52
HMBOX1-206ENST00000519047 TOP2AP11388 1531 aaKnown RBP11.68□□□□□ -0.54
HMBOX1-206ENST00000519047 ADRA2BP18089 450 aa11.59□□□□□ -0.55
HMBOX1-206ENST00000519047 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
HMBOX1-206ENST00000519047 NESP48681 1621 aa11.58□□□□□ -0.56
HMBOX1-206ENST00000519047 LAMC3Q9Y6N6 1575 aa11.57□□□□□ -0.56
HMBOX1-206ENST00000519047 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
HMBOX1-206ENST00000519047 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
HMBOX1-206ENST00000519047 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
HMBOX1-206ENST00000519047 CFTRP13569 1480 aa11.51□□□□□ -0.57
HMBOX1-206ENST00000519047 PDS5BQ9NTI5 1447 aa11.48□□□□□ -0.57
HMBOX1-206ENST00000519047 ERCC6Q03468 1493 aa11.47□□□□□ -0.57
HMBOX1-206ENST00000519047 KIF21AQ7Z4S6 1674 aa11.46□□□□□ -0.58
HMBOX1-206ENST00000519047 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
HMBOX1-206ENST00000519047 FANCD2Q9BXW9 1451 aa11.41□□□□□ -0.58
HMBOX1-206ENST00000519047 THOC2Q8NI27 1593 aaKnown RBP11.39□□□□□ -0.59
HMBOX1-206ENST00000519047 CEP164Q9UPV0 1460 aa11.38□□□□□ -0.59
HMBOX1-206ENST00000519047 CUX2O14529 1486 aa11.35□□□□□ -0.59
HMBOX1-206ENST00000519047 MRC2Q9UBG0 1479 aa11.34□□□□□ -0.59
HMBOX1-206ENST00000519047 WDR62O43379 1518 aa11.32□□□□□ -0.6
HMBOX1-206ENST00000519047 URB2Q14146 1524 aaKnown RBP11.3□□□□□ -0.6
HMBOX1-206ENST00000519047 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
HMBOX1-206ENST00000519047 TOPBP1Q92547 1522 aa11.24□□□□□ -0.61
HMBOX1-206ENST00000519047 DNMBPQ6XZF7 1577 aa11.23□□□□□ -0.61
HMBOX1-206ENST00000519047 PIAS4Q8N2W9 510 aaPredicted RBP11.2□□□□□ -0.62
HMBOX1-206ENST00000519047 CUX1P39880 1505 aa11.19□□□□□ -0.62
HMBOX1-206ENST00000519047 POLA1P09884 1462 aaPredicted RBP11.15□□□□□ -0.62
HMBOX1-206ENST00000519047 IFT140Q96RY7 1462 aa11.14□□□□□ -0.63
HMBOX1-206ENST00000519047 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
HMBOX1-206ENST00000519047 WRNQ14191 1432 aaPredicted RBP eCLIP11.13□□□□□ -0.63
HMBOX1-206ENST00000519047 FGD5Q6ZNL6 1462 aa11.13□□□□□ -0.63
HMBOX1-206ENST00000519047 TOP2BQ02880 1626 aa11.12□□□□□ -0.63
HMBOX1-206ENST00000519047 BIVM-ERCC5R4GMW8 1640 aa11.12□□□□□ -0.63
HMBOX1-206ENST00000519047 SOGA1O94964 1423 aa11.11□□□□□ -0.63
HMBOX1-206ENST00000519047 SYNJ1O43426 1573 aa11.11□□□□□ -0.63
HMBOX1-206ENST00000519047 RAD54L2Q9Y4B4 1467 aa11.1□□□□□ -0.63
HMBOX1-206ENST00000519047 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
HMBOX1-206ENST00000519047 KCNA4P22459 653 aa11.08□□□□□ -0.64
HMBOX1-206ENST00000519047 AQRO60306 1485 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■■■□ 20.6
HMBOX1-206ENST00000519047 WDR97A6NE52 1622 aa11.05□□□□□ -0.64
HMBOX1-206ENST00000519047 EIF4G3O43432 1585 aaKnown RBP11.04□□□□□ -0.64
HMBOX1-206ENST00000519047 ABCA10Q8WWZ4 1543 aa11.04□□□□□ -0.64
HMBOX1-206ENST00000519047 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
HMBOX1-206ENST00000519047 ABCA5Q8WWZ7 1642 aa10.98□□□□□ -0.65
HMBOX1-206ENST00000519047 GAPVD1Q14C86 1478 aa10.98□□□□□ -0.65
HMBOX1-206ENST00000519047 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
HMBOX1-206ENST00000519047 GRIN2BQ13224 1484 aa10.96□□□□□ -0.66
HMBOX1-206ENST00000519047 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
HMBOX1-206ENST00000519047 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
HMBOX1-206ENST00000519047 TRIM41Q8WV44 630 aa10.93□□□□□ -0.66
HMBOX1-206ENST00000519047 MAGI1Q96QZ7 1491 aaPredicted RBP10.92□□□□□ -0.66
HMBOX1-206ENST00000519047 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
HMBOX1-206ENST00000519047 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
HMBOX1-206ENST00000519047 CHD1O14646 1710 aa10.91□□□□□ -0.66
HMBOX1-206ENST00000519047 ERICH3Q5RHP9 1530 aa10.9□□□□□ -0.66
HMBOX1-206ENST00000519047 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
HMBOX1-206ENST00000519047 SYNJ2O15056 1496 aa10.88□□□□□ -0.67
HMBOX1-206ENST00000519047 FBLN2P98095 1184 aa10.87□□□□□ -0.67
HMBOX1-206ENST00000519047 IGF1RP08069 1367 aa10.87□□□□□ -0.67
HMBOX1-206ENST00000519047 CHMP7Q8WUX9 453 aaPredicted RBP10.86□□□□□ -0.67
HMBOX1-206ENST00000519047 ADAMTS12P58397 1594 aa10.85□□□□□ -0.67
HMBOX1-206ENST00000519047 FHAD1B1AJZ9 1412 aa10.85□□□□□ -0.67
HMBOX1-206ENST00000519047 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
HMBOX1-206ENST00000519047 GRIN2AQ12879 1464 aa10.83□□□□□ -0.68
HMBOX1-206ENST00000519047 CUL7Q14999 1698 aa10.81□□□□□ -0.68
HMBOX1-206ENST00000519047 NCBP3Q53F19 620 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms