RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 NISCHQ9Y2I1 1504 aa32.23■■■□□ 2.75
TMEM55A-203ENST00000518869 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
TMEM55A-203ENST00000518869 ABCC9O60706 1549 aa28.39■■■□□ 2.14
TMEM55A-203ENST00000518869 RB1CC1Q8TDY2 1594 aa27.26■■□□□ 1.96
TMEM55A-203ENST00000518869 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
TMEM55A-203ENST00000518869 NACADO15069 1562 aa27.18■■□□□ 1.94
TMEM55A-203ENST00000518869 MYO15BQ96JP2 1530 aa26.94■■□□□ 1.9
TMEM55A-203ENST00000518869 ZCCHC6Q5VYS8 1495 aaKnown RBP26.75■■□□□ 1.87
TMEM55A-203ENST00000518869 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.86
TMEM55A-203ENST00000518869 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
TMEM55A-203ENST00000518869 UNC13AQ9UPW8 1703 aa26.4■■□□□ 1.82
TMEM55A-203ENST00000518869 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
TMEM55A-203ENST00000518869 DNAJC5BQ9UF47 199 aa26.27■■□□□ 1.8
TMEM55A-203ENST00000518869 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
TMEM55A-203ENST00000518869 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
TMEM55A-203ENST00000518869 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
TMEM55A-203ENST00000518869 CC2D2AQ9P2K1 1620 aa25.64■■□□□ 1.7
TMEM55A-203ENST00000518869 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
TMEM55A-203ENST00000518869 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
TMEM55A-203ENST00000518869 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
TMEM55A-203ENST00000518869 SMARCA2P51531 1590 aa25.02■■□□□ 1.6
TMEM55A-203ENST00000518869 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
TMEM55A-203ENST00000518869 SMARCA4P51532 1647 aa25.01■■□□□ 1.59
TMEM55A-203ENST00000518869 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
TMEM55A-203ENST00000518869 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.56
TMEM55A-203ENST00000518869 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
TMEM55A-203ENST00000518869 MROH2BQ7Z745 1585 aa24.77■■□□□ 1.56
TMEM55A-203ENST00000518869 ERCC6Q03468 1493 aa24.6■■□□□ 1.53
TMEM55A-203ENST00000518869 RSF1Q96T23 1441 aaPredicted RBP24.46■■□□□ 1.51
TMEM55A-203ENST00000518869 WIZO95785 1651 aa24.46■■□□□ 1.51
TMEM55A-203ENST00000518869 LAMC3Q9Y6N6 1575 aa24.44■■□□□ 1.5
TMEM55A-203ENST00000518869 NESP48681 1621 aa24.43■■□□□ 1.5
TMEM55A-203ENST00000518869 CUX2O14529 1486 aa24.42■■□□□ 1.5
TMEM55A-203ENST00000518869 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.5
TMEM55A-203ENST00000518869 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
TMEM55A-203ENST00000518869 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
TMEM55A-203ENST00000518869 CFTRP13569 1480 aa24.12■■□□□ 1.45
TMEM55A-203ENST00000518869 THOC2Q8NI27 1593 aaKnown RBP24.09■■□□□ 1.45
TMEM55A-203ENST00000518869 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.45
TMEM55A-203ENST00000518869 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
TMEM55A-203ENST00000518869 CEP164Q9UPV0 1460 aa24.05■■□□□ 1.44
TMEM55A-203ENST00000518869 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
TMEM55A-203ENST00000518869 DNAJC5Q9H3Z4 198 aa24.02■■□□□ 1.44
TMEM55A-203ENST00000518869 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
TMEM55A-203ENST00000518869 WDR62O43379 1518 aa23.94■■□□□ 1.42
TMEM55A-203ENST00000518869 PRDM2Q13029 1718 aa23.78■■□□□ 1.4
TMEM55A-203ENST00000518869 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
TMEM55A-203ENST00000518869 URB2Q14146 1524 aaKnown RBP23.73■■□□□ 1.39
TMEM55A-203ENST00000518869 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
TMEM55A-203ENST00000518869 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
TMEM55A-203ENST00000518869 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
TMEM55A-203ENST00000518869 DNMBPQ6XZF7 1577 aa23.54■■□□□ 1.36
TMEM55A-203ENST00000518869 OSCARQ8IYS5 282 aa23.47■■□□□ 1.35
TMEM55A-203ENST00000518869 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
TMEM55A-203ENST00000518869 SOGA1O94964 1423 aa23.36■■□□□ 1.33
TMEM55A-203ENST00000518869 POLA1P09884 1462 aaPredicted RBP23.36■■□□□ 1.33
TMEM55A-203ENST00000518869 TARBP1Q13395 1621 aaKnown RBP23.29■■□□□ 1.32
TMEM55A-203ENST00000518869 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.328e-7■■■■■ 28.7
TMEM55A-203ENST00000518869 FGD5Q6ZNL6 1462 aa23.27■■□□□ 1.32
TMEM55A-203ENST00000518869 CUX1P39880 1505 aa23.26■■□□□ 1.31
TMEM55A-203ENST00000518869 EIF4G3O43432 1585 aaKnown RBP23.26■■□□□ 1.31
TMEM55A-203ENST00000518869 RAD54L2Q9Y4B4 1467 aa23.24■■□□□ 1.31
TMEM55A-203ENST00000518869 TDRD9Q8NDG6 1382 aaKnown RBP23.22■■□□□ 1.31
TMEM55A-203ENST00000518869 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
TMEM55A-203ENST00000518869 FBLN2P98095 1184 aa23.18■■□□□ 1.3
TMEM55A-203ENST00000518869 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
TMEM55A-203ENST00000518869 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
TMEM55A-203ENST00000518869 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
TMEM55A-203ENST00000518869 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
TMEM55A-203ENST00000518869 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
TMEM55A-203ENST00000518869 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
TMEM55A-203ENST00000518869 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
TMEM55A-203ENST00000518869 SNAPC4Q5SXM2 1469 aa23.04■■□□□ 1.28
TMEM55A-203ENST00000518869 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
TMEM55A-203ENST00000518869 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
TMEM55A-203ENST00000518869 CHD1O14646 1710 aa22.97■■□□□ 1.27
TMEM55A-203ENST00000518869 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
TMEM55A-203ENST00000518869 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
TMEM55A-203ENST00000518869 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
TMEM55A-203ENST00000518869 ABCA5Q8WWZ7 1642 aa22.9■■□□□ 1.26
TMEM55A-203ENST00000518869 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
TMEM55A-203ENST00000518869 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
TMEM55A-203ENST00000518869 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
TMEM55A-203ENST00000518869 PBRM1Q86U86 1689 aa22.87■■□□□ 1.25
TMEM55A-203ENST00000518869 CYB5RLQ6IPT4 315 aa22.84■■□□□ 1.25
TMEM55A-203ENST00000518869 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
TMEM55A-203ENST00000518869 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
TMEM55A-203ENST00000518869 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
TMEM55A-203ENST00000518869 GRIN2AQ12879 1464 aa22.76■■□□□ 1.23
TMEM55A-203ENST00000518869 KIF27Q86VH2 1401 aa22.73■■□□□ 1.23
TMEM55A-203ENST00000518869 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
TMEM55A-203ENST00000518869 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
TMEM55A-203ENST00000518869 NUP160Q12769 1436 aa22.66■■□□□ 1.22
TMEM55A-203ENST00000518869 IGF1RP08069 1367 aa22.61■■□□□ 1.21
TMEM55A-203ENST00000518869 CEP170Q5SW79 1584 aa22.56■■□□□ 1.2
TMEM55A-203ENST00000518869 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
TMEM55A-203ENST00000518869 TRHP20396 242 aaPredicted RBP22.53■■□□□ 1.2
TMEM55A-203ENST00000518869 CUL7Q14999 1698 aa22.52■■□□□ 1.2
TMEM55A-203ENST00000518869 CARMIL1Q5VZK9 1371 aa22.5■■□□□ 1.19
TMEM55A-203ENST00000518869 PRG4Q92954 1404 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms