RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
TRAPPC2-206ENST00000518847 CCDC180Q9P1Z9 1646 aa24.65■■□□□ 1.54
TRAPPC2-206ENST00000518847 ABCC9O60706 1549 aa23.58■■□□□ 1.36
TRAPPC2-206ENST00000518847 ZCCHC6Q5VYS8 1495 aaKnown RBP23.24■■□□□ 1.31
TRAPPC2-206ENST00000518847 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
TRAPPC2-206ENST00000518847 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
TRAPPC2-206ENST00000518847 NACADO15069 1562 aa23.11■■□□□ 1.29
TRAPPC2-206ENST00000518847 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
TRAPPC2-206ENST00000518847 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
TRAPPC2-206ENST00000518847 SCRIBQ14160 1630 aa22.35■■□□□ 1.17
TRAPPC2-206ENST00000518847 UNC13AQ9UPW8 1703 aa22.31■■□□□ 1.16
TRAPPC2-206ENST00000518847 SHROOM4Q9ULL8 1493 aa22.25■■□□□ 1.15
TRAPPC2-206ENST00000518847 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
TRAPPC2-206ENST00000518847 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
TRAPPC2-206ENST00000518847 DNAJC5BQ9UF47 199 aa21.81■■□□□ 1.08
TRAPPC2-206ENST00000518847 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC2-206ENST00000518847 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
TRAPPC2-206ENST00000518847 SMARCA4P51532 1647 aa21.49■■□□□ 1.03
TRAPPC2-206ENST00000518847 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
TRAPPC2-206ENST00000518847 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
TRAPPC2-206ENST00000518847 CC2D2AQ9P2K1 1620 aa21.39■■□□□ 1.01
TRAPPC2-206ENST00000518847 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
TRAPPC2-206ENST00000518847 PEG3Q9GZU2 1588 aa21.34■■□□□ 1.01
TRAPPC2-206ENST00000518847 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
TRAPPC2-206ENST00000518847 ATAD2BQ9ULI0 1458 aa21.28■■□□□ 1
TRAPPC2-206ENST00000518847 NCAPD3P42695 1498 aa21.27■■□□□ 1
TRAPPC2-206ENST00000518847 HMGXB3Q12766 1538 aa21.22■□□□□ 0.99
TRAPPC2-206ENST00000518847 BAZ1BQ9UIG0 1483 aaKnown RBP21.18■□□□□ 0.98
TRAPPC2-206ENST00000518847 WIZO95785 1651 aa21.13■□□□□ 0.97
TRAPPC2-206ENST00000518847 TOP2AP11388 1531 aaKnown RBP21.04■□□□□ 0.96
TRAPPC2-206ENST00000518847 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
TRAPPC2-206ENST00000518847 CCDC88BA6NC98 1476 aa20.73■□□□□ 0.91
TRAPPC2-206ENST00000518847 LAMC3Q9Y6N6 1575 aa20.69■□□□□ 0.9
TRAPPC2-206ENST00000518847 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
TRAPPC2-206ENST00000518847 CFTRP13569 1480 aa20.61■□□□□ 0.89
TRAPPC2-206ENST00000518847 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
TRAPPC2-206ENST00000518847 PRDM2Q13029 1718 aa20.51■□□□□ 0.87
TRAPPC2-206ENST00000518847 NESP48681 1621 aa20.45■□□□□ 0.87
TRAPPC2-206ENST00000518847 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
TRAPPC2-206ENST00000518847 FANCD2Q9BXW9 1451 aa20.4■□□□□ 0.86
TRAPPC2-206ENST00000518847 CEP164Q9UPV0 1460 aa20.38■□□□□ 0.85
TRAPPC2-206ENST00000518847 ABCC8Q09428 1581 aa20.32■□□□□ 0.84
TRAPPC2-206ENST00000518847 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
TRAPPC2-206ENST00000518847 DNAJC5Q9H3Z4 198 aa20.26■□□□□ 0.83
TRAPPC2-206ENST00000518847 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
TRAPPC2-206ENST00000518847 CUX2O14529 1486 aa20.21■□□□□ 0.83
TRAPPC2-206ENST00000518847 WDR62O43379 1518 aa20.16■□□□□ 0.82
TRAPPC2-206ENST00000518847 DNMBPQ6XZF7 1577 aa20.15■□□□□ 0.82
TRAPPC2-206ENST00000518847 THOC2Q8NI27 1593 aaKnown RBP20.14■□□□□ 0.81
TRAPPC2-206ENST00000518847 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
TRAPPC2-206ENST00000518847 TOPBP1Q92547 1522 aa20.09■□□□□ 0.81
TRAPPC2-206ENST00000518847 URB2Q14146 1524 aaKnown RBP20.08■□□□□ 0.81
TRAPPC2-206ENST00000518847 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
TRAPPC2-206ENST00000518847 CUX1P39880 1505 aa20.02■□□□□ 0.8
TRAPPC2-206ENST00000518847 BIVM-ERCC5R4GMW8 1640 aa20.02■□□□□ 0.8
TRAPPC2-206ENST00000518847 TRIM41Q8WV44 630 aa19.97■□□□□ 0.79
TRAPPC2-206ENST00000518847 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
TRAPPC2-206ENST00000518847 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
TRAPPC2-206ENST00000518847 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
TRAPPC2-206ENST00000518847 FGD5Q6ZNL6 1462 aa19.93■□□□□ 0.78
TRAPPC2-206ENST00000518847 SOGA1O94964 1423 aa19.92■□□□□ 0.78
TRAPPC2-206ENST00000518847 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
TRAPPC2-206ENST00000518847 CHIC1Q5VXU3 224 aa19.83■□□□□ 0.77
TRAPPC2-206ENST00000518847 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
TRAPPC2-206ENST00000518847 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
TRAPPC2-206ENST00000518847 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
TRAPPC2-206ENST00000518847 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
TRAPPC2-206ENST00000518847 EEA1Q15075 1411 aa19.71■□□□□ 0.75
TRAPPC2-206ENST00000518847 GAPVD1Q14C86 1478 aa19.7■□□□□ 0.74
TRAPPC2-206ENST00000518847 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
TRAPPC2-206ENST00000518847 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
TRAPPC2-206ENST00000518847 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
TRAPPC2-206ENST00000518847 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
TRAPPC2-206ENST00000518847 ERICH3Q5RHP9 1530 aa19.65■□□□□ 0.74
TRAPPC2-206ENST00000518847 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC2-206ENST00000518847 AQRO60306 1485 aaKnown RBP eCLIP19.63■□□□□ 0.73
TRAPPC2-206ENST00000518847 MAGI1Q96QZ7 1491 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC2-206ENST00000518847 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
TRAPPC2-206ENST00000518847 CUL7Q14999 1698 aa19.55■□□□□ 0.72
TRAPPC2-206ENST00000518847 IGF1RP08069 1367 aa19.52■□□□□ 0.72
TRAPPC2-206ENST00000518847 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
TRAPPC2-206ENST00000518847 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
TRAPPC2-206ENST00000518847 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
TRAPPC2-206ENST00000518847 SNAPC4Q5SXM2 1469 aa19.5■□□□□ 0.71
TRAPPC2-206ENST00000518847 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC2-206ENST00000518847 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
TRAPPC2-206ENST00000518847 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
TRAPPC2-206ENST00000518847 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
TRAPPC2-206ENST00000518847 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
TRAPPC2-206ENST00000518847 FBLN2P98095 1184 aa19.4■□□□□ 0.7
TRAPPC2-206ENST00000518847 PRXQ9BXM0 1461 aa19.38■□□□□ 0.69
TRAPPC2-206ENST00000518847 GRIN2AQ12879 1464 aa19.37■□□□□ 0.69
TRAPPC2-206ENST00000518847 OSCARQ8IYS5 282 aa19.37■□□□□ 0.69
TRAPPC2-206ENST00000518847 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC2-206ENST00000518847 KIF21BO75037 1637 aa19.34■□□□□ 0.69
TRAPPC2-206ENST00000518847 CHD1O14646 1710 aa19.32■□□□□ 0.68
TRAPPC2-206ENST00000518847 GOLGA3Q08378 1498 aa19.28■□□□□ 0.68
TRAPPC2-206ENST00000518847 NUP160Q12769 1436 aa19.27■□□□□ 0.68
TRAPPC2-206ENST00000518847 KIAA0586Q9BVV6 1533 aa19.23■□□□□ 0.67
TRAPPC2-206ENST00000518847 UBTFP17480 764 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms