RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
TRAPPC9-205ENST00000518839 CCDC180Q9P1Z9 1646 aa30.12■■■□□ 2.41
TRAPPC9-205ENST00000518839 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
TRAPPC9-205ENST00000518839 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
TRAPPC9-205ENST00000518839 ABCC9O60706 1549 aa28.32■■■□□ 2.12
TRAPPC9-205ENST00000518839 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
TRAPPC9-205ENST00000518839 DCAF8L2P0C7V8 631 aa28.2■■■□□ 2.1
TRAPPC9-205ENST00000518839 NACADO15069 1562 aa28.03■■■□□ 2.08
TRAPPC9-205ENST00000518839 RB1CC1Q8TDY2 1594 aa27.8■■■□□ 2.04
TRAPPC9-205ENST00000518839 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
TRAPPC9-205ENST00000518839 SCRIBQ14160 1630 aa27.52■■■□□ 2
TRAPPC9-205ENST00000518839 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.94
TRAPPC9-205ENST00000518839 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
TRAPPC9-205ENST00000518839 SUPT5HO00267 1087 aaKnown RBP26.69■■□□□ 1.86
TRAPPC9-205ENST00000518839 PABPN1Q86U42 306 aaKnown RBP eCLIP26.61■■□□□ 1.85
TRAPPC9-205ENST00000518839 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
TRAPPC9-205ENST00000518839 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
TRAPPC9-205ENST00000518839 RSF1Q96T23 1441 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC9-205ENST00000518839 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
TRAPPC9-205ENST00000518839 SMARCA4P51532 1647 aa26.43■■□□□ 1.82
TRAPPC9-205ENST00000518839 WIZO95785 1651 aa26.26■■□□□ 1.79
TRAPPC9-205ENST00000518839 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
TRAPPC9-205ENST00000518839 EIF4G1Q04637 1599 aaKnown RBP26.08■■□□□ 1.77
TRAPPC9-205ENST00000518839 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
TRAPPC9-205ENST00000518839 SMARCA2P51531 1590 aa26.05■■□□□ 1.76
TRAPPC9-205ENST00000518839 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
TRAPPC9-205ENST00000518839 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
TRAPPC9-205ENST00000518839 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
TRAPPC9-205ENST00000518839 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
TRAPPC9-205ENST00000518839 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
TRAPPC9-205ENST00000518839 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.71
TRAPPC9-205ENST00000518839 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
TRAPPC9-205ENST00000518839 PRDM2Q13029 1718 aa25.22■■□□□ 1.63
TRAPPC9-205ENST00000518839 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
TRAPPC9-205ENST00000518839 CFTRP13569 1480 aa25.19■■□□□ 1.62
TRAPPC9-205ENST00000518839 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
TRAPPC9-205ENST00000518839 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
TRAPPC9-205ENST00000518839 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
TRAPPC9-205ENST00000518839 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
TRAPPC9-205ENST00000518839 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
TRAPPC9-205ENST00000518839 SYNJ1O43426 1573 aa24.9■■□□□ 1.58
TRAPPC9-205ENST00000518839 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
TRAPPC9-205ENST00000518839 TOP2BQ02880 1626 aa24.88■■□□□ 1.57
TRAPPC9-205ENST00000518839 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.56
TRAPPC9-205ENST00000518839 NESP48681 1621 aa24.82■■□□□ 1.56
TRAPPC9-205ENST00000518839 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
TRAPPC9-205ENST00000518839 CUX1P39880 1505 aa24.76■■□□□ 1.55
TRAPPC9-205ENST00000518839 EEA1Q15075 1411 aa24.73■■□□□ 1.55
TRAPPC9-205ENST00000518839 CEP164Q9UPV0 1460 aa24.71■■□□□ 1.55
TRAPPC9-205ENST00000518839 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
TRAPPC9-205ENST00000518839 KIF21AQ7Z4S6 1674 aa24.64■■□□□ 1.53
TRAPPC9-205ENST00000518839 FAM9AQ8IZU1 332 aaPredicted RBP24.6■■□□□ 1.53
TRAPPC9-205ENST00000518839 SOGA1O94964 1423 aa24.6■■□□□ 1.53
TRAPPC9-205ENST00000518839 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
TRAPPC9-205ENST00000518839 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
TRAPPC9-205ENST00000518839 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
TRAPPC9-205ENST00000518839 RUSC2Q8N2Y8 1516 aa24.48■■□□□ 1.51
TRAPPC9-205ENST00000518839 LOC105371045A0A1W2PR82 267 aa24.47■■□□□ 1.51
TRAPPC9-205ENST00000518839 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
TRAPPC9-205ENST00000518839 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
TRAPPC9-205ENST00000518839 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
TRAPPC9-205ENST00000518839 POLA1P09884 1462 aaPredicted RBP24.41■■□□□ 1.5
TRAPPC9-205ENST00000518839 KIF21BO75037 1637 aa24.39■■□□□ 1.5
TRAPPC9-205ENST00000518839 ERCC6Q03468 1493 aa24.36■■□□□ 1.49
TRAPPC9-205ENST00000518839 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
TRAPPC9-205ENST00000518839 CUX2O14529 1486 aa24.33■■□□□ 1.49
TRAPPC9-205ENST00000518839 WDR62O43379 1518 aa24.33■■□□□ 1.49
TRAPPC9-205ENST00000518839 GOLGA3Q08378 1498 aa24.32■■□□□ 1.48
TRAPPC9-205ENST00000518839 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
TRAPPC9-205ENST00000518839 RAD54L2Q9Y4B4 1467 aa24.26■■□□□ 1.47
TRAPPC9-205ENST00000518839 THOC2Q8NI27 1593 aaKnown RBP24.26■■□□□ 1.47
TRAPPC9-205ENST00000518839 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
TRAPPC9-205ENST00000518839 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
TRAPPC9-205ENST00000518839 PRXQ9BXM0 1461 aa24.21■■□□□ 1.47
TRAPPC9-205ENST00000518839 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
TRAPPC9-205ENST00000518839 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
TRAPPC9-205ENST00000518839 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
TRAPPC9-205ENST00000518839 IGF1RP08069 1367 aa24.15■■□□□ 1.46
TRAPPC9-205ENST00000518839 IFT140Q96RY7 1462 aa24.14■■□□□ 1.46
TRAPPC9-205ENST00000518839 RAPGEF2Q9Y4G8 1499 aa24.13■■□□□ 1.45
TRAPPC9-205ENST00000518839 CUL7Q14999 1698 aa24.13■■□□□ 1.45
TRAPPC9-205ENST00000518839 UBTFP17480 764 aaKnown RBP24.12■■□□□ 1.45
TRAPPC9-205ENST00000518839 GAPVD1Q14C86 1478 aa24.08■■□□□ 1.45
TRAPPC9-205ENST00000518839 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
TRAPPC9-205ENST00000518839 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
TRAPPC9-205ENST00000518839 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
TRAPPC9-205ENST00000518839 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
TRAPPC9-205ENST00000518839 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
TRAPPC9-205ENST00000518839 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
TRAPPC9-205ENST00000518839 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
TRAPPC9-205ENST00000518839 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.41
TRAPPC9-205ENST00000518839 CLIP1P30622 1438 aa23.88■■□□□ 1.41
TRAPPC9-205ENST00000518839 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
TRAPPC9-205ENST00000518839 CTTNBP2Q8WZ74 1663 aa23.85■■□□□ 1.41
TRAPPC9-205ENST00000518839 FHAD1B1AJZ9 1412 aa23.84■■□□□ 1.41
TRAPPC9-205ENST00000518839 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
TRAPPC9-205ENST00000518839 SNAPC4Q5SXM2 1469 aa23.74■■□□□ 1.39
TRAPPC9-205ENST00000518839 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
TRAPPC9-205ENST00000518839 EFCAB5A4FU69 1503 aa23.67■■□□□ 1.38
TRAPPC9-205ENST00000518839 ARHGAP35Q9NRY4 1499 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 1636.9 ms