RNA–Protein interactions for RNA: ENST00000518806.1

DENND3-209, Transcript of DENN domain containing 3, humanhuman

TSL 3

Gene DENND3, Length 1,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-209ENST00000518806 NISCHQ9Y2I1 1504 aa30.83■■■□□ 2.53
DENND3-209ENST00000518806 CCDC180Q9P1Z9 1646 aa27.36■■□□□ 1.97
DENND3-209ENST00000518806 ABCC9O60706 1549 aa27.34■■□□□ 1.97
DENND3-209ENST00000518806 DCAF8L2P0C7V8 631 aa26.1■■□□□ 1.77
DENND3-209ENST00000518806 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
DENND3-209ENST00000518806 NACADO15069 1562 aa25.88■■□□□ 1.73
DENND3-209ENST00000518806 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
DENND3-209ENST00000518806 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.69
DENND3-209ENST00000518806 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.68
DENND3-209ENST00000518806 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
DENND3-209ENST00000518806 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
DENND3-209ENST00000518806 UNC13AQ9UPW8 1703 aa25.33■■□□□ 1.65
DENND3-209ENST00000518806 BICRAQ9NZM4 1560 aa25.28■■□□□ 1.64
DENND3-209ENST00000518806 SCRIBQ14160 1630 aa25.15■■□□□ 1.62
DENND3-209ENST00000518806 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
DENND3-209ENST00000518806 EIF4G1Q04637 1599 aaKnown RBP24.62■■□□□ 1.53
DENND3-209ENST00000518806 CC2D2AQ9P2K1 1620 aa24.61■■□□□ 1.53
DENND3-209ENST00000518806 CECR2Q9BXF3 1484 aa24.55■■□□□ 1.52
DENND3-209ENST00000518806 ATAD2BQ9ULI0 1458 aa23.96■■□□□ 1.43
DENND3-209ENST00000518806 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
DENND3-209ENST00000518806 NCAPD3P42695 1498 aa23.95■■□□□ 1.42
DENND3-209ENST00000518806 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
DENND3-209ENST00000518806 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
DENND3-209ENST00000518806 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
DENND3-209ENST00000518806 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
DENND3-209ENST00000518806 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
DENND3-209ENST00000518806 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
DENND3-209ENST00000518806 NESP48681 1621 aa23.58■■□□□ 1.37
DENND3-209ENST00000518806 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
DENND3-209ENST00000518806 WIZO95785 1651 aa23.5■■□□□ 1.35
DENND3-209ENST00000518806 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
DENND3-209ENST00000518806 CUX2O14529 1486 aa23.31■■□□□ 1.32
DENND3-209ENST00000518806 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
DENND3-209ENST00000518806 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
DENND3-209ENST00000518806 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
DENND3-209ENST00000518806 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
DENND3-209ENST00000518806 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.3
DENND3-209ENST00000518806 KIF21AQ7Z4S6 1674 aa23.13■■□□□ 1.29
DENND3-209ENST00000518806 CFTRP13569 1480 aa23.05■■□□□ 1.28
DENND3-209ENST00000518806 DNAJC5Q9H3Z4 198 aa23.05■■□□□ 1.28
DENND3-209ENST00000518806 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.27
DENND3-209ENST00000518806 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.27
DENND3-209ENST00000518806 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
DENND3-209ENST00000518806 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
DENND3-209ENST00000518806 WDR62O43379 1518 aa22.9■■□□□ 1.26
DENND3-209ENST00000518806 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
DENND3-209ENST00000518806 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
DENND3-209ENST00000518806 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
DENND3-209ENST00000518806 TOPBP1Q92547 1522 aa22.6■■□□□ 1.21
DENND3-209ENST00000518806 ZNF608Q9ULD9 1512 aaPredicted RBP22.53■■□□□ 1.2
DENND3-209ENST00000518806 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
DENND3-209ENST00000518806 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
DENND3-209ENST00000518806 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
DENND3-209ENST00000518806 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
DENND3-209ENST00000518806 OSCARQ8IYS5 282 aa22.39■■□□□ 1.18
DENND3-209ENST00000518806 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
DENND3-209ENST00000518806 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.17
DENND3-209ENST00000518806 CUX1P39880 1505 aa22.34■■□□□ 1.17
DENND3-209ENST00000518806 SOGA1O94964 1423 aa22.33■■□□□ 1.17
DENND3-209ENST00000518806 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.16
DENND3-209ENST00000518806 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
DENND3-209ENST00000518806 FGD5Q6ZNL6 1462 aa22.31■■□□□ 1.16
DENND3-209ENST00000518806 TDRD9Q8NDG6 1382 aaKnown RBP22.31■■□□□ 1.16
DENND3-209ENST00000518806 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
DENND3-209ENST00000518806 FBLN2P98095 1184 aa22.23■■□□□ 1.15
DENND3-209ENST00000518806 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
DENND3-209ENST00000518806 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
DENND3-209ENST00000518806 GRIN2BQ13224 1484 aa22.06■■□□□ 1.12
DENND3-209ENST00000518806 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
DENND3-209ENST00000518806 CHD1O14646 1710 aa22.04■■□□□ 1.12
DENND3-209ENST00000518806 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
DENND3-209ENST00000518806 ABCA10Q8WWZ4 1543 aa22.04■■□□□ 1.12
DENND3-209ENST00000518806 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
DENND3-209ENST00000518806 WDR97A6NE52 1622 aa22■■□□□ 1.11
DENND3-209ENST00000518806 RIMBP3CA6NJZ7 1639 aa22■■□□□ 1.11
DENND3-209ENST00000518806 RIMBP3BA6NNM3 1639 aa22■■□□□ 1.11
DENND3-209ENST00000518806 RIMBP3Q9UFD9 1639 aa22■■□□□ 1.11
DENND3-209ENST00000518806 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
DENND3-209ENST00000518806 ARHGEF11O15085 1522 aa21.99■■□□□ 1.11
DENND3-209ENST00000518806 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
DENND3-209ENST00000518806 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
DENND3-209ENST00000518806 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
DENND3-209ENST00000518806 ABCA5Q8WWZ7 1642 aa21.93■■□□□ 1.1
DENND3-209ENST00000518806 CYB5RLQ6IPT4 315 aa21.92■■□□□ 1.1
DENND3-209ENST00000518806 PBRM1Q86U86 1689 aa21.89■■□□□ 1.09
DENND3-209ENST00000518806 CLASP1Q7Z460 1538 aa21.85■■□□□ 1.09
DENND3-209ENST00000518806 ARAP1Q96P48 1450 aa21.83■■□□□ 1.09
DENND3-209ENST00000518806 GRIN2AQ12879 1464 aa21.78■■□□□ 1.08
DENND3-209ENST00000518806 ADAMTS12P58397 1594 aa21.77■■□□□ 1.08
DENND3-209ENST00000518806 FHAD1B1AJZ9 1412 aa21.76■■□□□ 1.07
DENND3-209ENST00000518806 ERICH3Q5RHP9 1530 aa21.72■■□□□ 1.07
DENND3-209ENST00000518806 NUP160Q12769 1436 aa21.69■■□□□ 1.06
DENND3-209ENST00000518806 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
DENND3-209ENST00000518806 IGF1RP08069 1367 aa21.65■■□□□ 1.06
DENND3-209ENST00000518806 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
DENND3-209ENST00000518806 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
DENND3-209ENST00000518806 TRHP20396 242 aaPredicted RBP21.58■■□□□ 1.05
DENND3-209ENST00000518806 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
DENND3-209ENST00000518806 PRG4Q92954 1404 aaPredicted RBP21.52■■□□□ 1.03
DENND3-209ENST00000518806 CARMIL1Q5VZK9 1371 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms