RNA–Protein interactions for RNA: ENST00000518789.5

ARFGEF1-205, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-205ENST00000518789 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
ARFGEF1-205ENST00000518789 CCDC180Q9P1Z9 1646 aa21■□□□□ 0.95
ARFGEF1-205ENST00000518789 ABCC9O60706 1549 aa20.07■□□□□ 0.8
ARFGEF1-205ENST00000518789 ZCCHC6Q5VYS8 1495 aaKnown RBP19.9■□□□□ 0.78
ARFGEF1-205ENST00000518789 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.77
ARFGEF1-205ENST00000518789 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
ARFGEF1-205ENST00000518789 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
ARFGEF1-205ENST00000518789 NACADO15069 1562 aa19.66■□□□□ 0.74
ARFGEF1-205ENST00000518789 RB1CC1Q8TDY2 1594 aa19.58■□□□□ 0.73
ARFGEF1-205ENST00000518789 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
ARFGEF1-205ENST00000518789 SHROOM4Q9ULL8 1493 aa19.07■□□□□ 0.64
ARFGEF1-205ENST00000518789 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
ARFGEF1-205ENST00000518789 BICRAQ9NZM4 1560 aa18.85■□□□□ 0.61
ARFGEF1-205ENST00000518789 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
ARFGEF1-205ENST00000518789 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
ARFGEF1-205ENST00000518789 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
ARFGEF1-205ENST00000518789 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
ARFGEF1-205ENST00000518789 EIF4G1Q04637 1599 aaKnown RBP18.37■□□□□ 0.53
ARFGEF1-205ENST00000518789 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
ARFGEF1-205ENST00000518789 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
ARFGEF1-205ENST00000518789 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
ARFGEF1-205ENST00000518789 SUPT5HO00267 1087 aaKnown RBP18.26■□□□□ 0.51
ARFGEF1-205ENST00000518789 SMARCA2P51531 1590 aa18.23■□□□□ 0.51
ARFGEF1-205ENST00000518789 PEG3Q9GZU2 1588 aa18.19■□□□□ 0.5
ARFGEF1-205ENST00000518789 CC2D2AQ9P2K1 1620 aa18.19■□□□□ 0.5
ARFGEF1-205ENST00000518789 WIZO95785 1651 aa18.16■□□□□ 0.5
ARFGEF1-205ENST00000518789 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
ARFGEF1-205ENST00000518789 NCAPD3P42695 1498 aa18.11■□□□□ 0.49
ARFGEF1-205ENST00000518789 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
ARFGEF1-205ENST00000518789 HMGXB3Q12766 1538 aa18.05■□□□□ 0.48
ARFGEF1-205ENST00000518789 TOP2AP11388 1531 aaKnown RBP18.02■□□□□ 0.47
ARFGEF1-205ENST00000518789 CCDC88BA6NC98 1476 aa17.8■□□□□ 0.44
ARFGEF1-205ENST00000518789 CADPSQ9ULU8 1353 aa17.63■□□□□ 0.41
ARFGEF1-205ENST00000518789 LAMC3Q9Y6N6 1575 aa17.58■□□□□ 0.41
ARFGEF1-205ENST00000518789 CFTRP13569 1480 aa17.58■□□□□ 0.41
ARFGEF1-205ENST00000518789 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
ARFGEF1-205ENST00000518789 PDS5BQ9NTI5 1447 aa17.49■□□□□ 0.39
ARFGEF1-205ENST00000518789 NESP48681 1621 aa17.47■□□□□ 0.39
ARFGEF1-205ENST00000518789 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
ARFGEF1-205ENST00000518789 CEP164Q9UPV0 1460 aa17.36■□□□□ 0.37
ARFGEF1-205ENST00000518789 ERCC6Q03468 1493 aa17.35■□□□□ 0.37
ARFGEF1-205ENST00000518789 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
ARFGEF1-205ENST00000518789 ABCC8Q09428 1581 aa17.3■□□□□ 0.36
ARFGEF1-205ENST00000518789 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.36
ARFGEF1-205ENST00000518789 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
ARFGEF1-205ENST00000518789 TRIM41Q8WV44 630 aa17.27■□□□□ 0.36
ARFGEF1-205ENST00000518789 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
ARFGEF1-205ENST00000518789 DNMBPQ6XZF7 1577 aa17.19■□□□□ 0.34
ARFGEF1-205ENST00000518789 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
ARFGEF1-205ENST00000518789 BIVM-ERCC5R4GMW8 1640 aa17.17■□□□□ 0.34
ARFGEF1-205ENST00000518789 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
ARFGEF1-205ENST00000518789 CUX1P39880 1505 aa17.16■□□□□ 0.34
ARFGEF1-205ENST00000518789 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
ARFGEF1-205ENST00000518789 SYNJ1O43426 1573 aa17.14■□□□□ 0.33
ARFGEF1-205ENST00000518789 WDR62O43379 1518 aa17.11■□□□□ 0.33
ARFGEF1-205ENST00000518789 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
ARFGEF1-205ENST00000518789 THOC2Q8NI27 1593 aaKnown RBP17.11■□□□□ 0.33
ARFGEF1-205ENST00000518789 FGD5Q6ZNL6 1462 aa17.06■□□□□ 0.32
ARFGEF1-205ENST00000518789 SOGA1O94964 1423 aa17.04■□□□□ 0.32
ARFGEF1-205ENST00000518789 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
ARFGEF1-205ENST00000518789 CUX2O14529 1486 aa16.99■□□□□ 0.31
ARFGEF1-205ENST00000518789 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
ARFGEF1-205ENST00000518789 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
ARFGEF1-205ENST00000518789 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
ARFGEF1-205ENST00000518789 EEA1Q15075 1411 aa16.94■□□□□ 0.3
ARFGEF1-205ENST00000518789 KIF27Q86VH2 1401 aa16.93■□□□□ 0.3
ARFGEF1-205ENST00000518789 TARBP1Q13395 1621 aaKnown RBP16.91■□□□□ 0.3
ARFGEF1-205ENST00000518789 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
ARFGEF1-205ENST00000518789 TDRD9Q8NDG6 1382 aaKnown RBP16.85■□□□□ 0.29
ARFGEF1-205ENST00000518789 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
ARFGEF1-205ENST00000518789 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
ARFGEF1-205ENST00000518789 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
ARFGEF1-205ENST00000518789 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
ARFGEF1-205ENST00000518789 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
ARFGEF1-205ENST00000518789 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.28
ARFGEF1-205ENST00000518789 ZNF608Q9ULD9 1512 aaPredicted RBP16.78■□□□□ 0.28
ARFGEF1-205ENST00000518789 GRIN2BQ13224 1484 aa16.78■□□□□ 0.28
ARFGEF1-205ENST00000518789 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
ARFGEF1-205ENST00000518789 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
ARFGEF1-205ENST00000518789 IGF1RP08069 1367 aa16.76■□□□□ 0.27
ARFGEF1-205ENST00000518789 PBRM1Q86U86 1689 aa16.74■□□□□ 0.27
ARFGEF1-205ENST00000518789 CUL7Q14999 1698 aa16.72■□□□□ 0.27
ARFGEF1-205ENST00000518789 CARMIL1Q5VZK9 1371 aa16.7■□□□□ 0.26
ARFGEF1-205ENST00000518789 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
ARFGEF1-205ENST00000518789 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
ARFGEF1-205ENST00000518789 KIF21BO75037 1637 aa16.65■□□□□ 0.26
ARFGEF1-205ENST00000518789 PRXQ9BXM0 1461 aa16.65■□□□□ 0.26
ARFGEF1-205ENST00000518789 RAPGEF2Q9Y4G8 1499 aa16.65■□□□□ 0.26
ARFGEF1-205ENST00000518789 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.25
ARFGEF1-205ENST00000518789 SNAPC4Q5SXM2 1469 aa16.64■□□□□ 0.25
ARFGEF1-205ENST00000518789 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
ARFGEF1-205ENST00000518789 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
ARFGEF1-205ENST00000518789 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
ARFGEF1-205ENST00000518789 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
ARFGEF1-205ENST00000518789 FBLN2P98095 1184 aa16.6■□□□□ 0.25
ARFGEF1-205ENST00000518789 AEBP2Q6ZN18 517 aaPredicted RBP16.6■□□□□ 0.25
ARFGEF1-205ENST00000518789 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
ARFGEF1-205ENST00000518789 LOC105371045A0A1W2PR82 267 aa16.55■□□□□ 0.24
ARFGEF1-205ENST00000518789 GRIN2AQ12879 1464 aa16.53■□□□□ 0.24
ARFGEF1-205ENST00000518789 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms