RNA–Protein interactions for RNA: ENST00000518612.1

AP001208.1-201, humanhuman

TSL 3 BASIC

Gene AP001208.1, Length 408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001208.1-201ENST00000518612 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
AP001208.1-201ENST00000518612 CHIC1Q5VXU3 224 aa15.68■□□□□ 0.1
AP001208.1-201ENST00000518612 NISCHQ9Y2I1 1504 aa14.41□□□□□ -0.1
AP001208.1-201ENST00000518612 ABCC9O60706 1549 aa13.8□□□□□ -0.2
AP001208.1-201ENST00000518612 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
AP001208.1-201ENST00000518612 SENP3Q9H4L4 574 aaPredicted RBP13.64□□□□□ -0.23
AP001208.1-201ENST00000518612 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
AP001208.1-201ENST00000518612 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
AP001208.1-201ENST00000518612 RB1CC1Q8TDY2 1594 aa12.95□□□□□ -0.34
AP001208.1-201ENST00000518612 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
AP001208.1-201ENST00000518612 PLPPR3Q6T4P5 718 aa12.77□□□□□ -0.37
AP001208.1-201ENST00000518612 NACADO15069 1562 aa12.69□□□□□ -0.38
AP001208.1-201ENST00000518612 PABPN1Q86U42 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
AP001208.1-201ENST00000518612 FOXD1Q16676 465 aa12.62□□□□□ -0.39
AP001208.1-201ENST00000518612 UNC13AQ9UPW8 1703 aa12.6□□□□□ -0.39
AP001208.1-201ENST00000518612 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
AP001208.1-201ENST00000518612 BICRAQ9NZM4 1560 aa12.52□□□□□ -0.41
AP001208.1-201ENST00000518612 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
AP001208.1-201ENST00000518612 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
AP001208.1-201ENST00000518612 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
AP001208.1-201ENST00000518612 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
AP001208.1-201ENST00000518612 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
AP001208.1-201ENST00000518612 CUX2O14529 1486 aa12.23□□□□□ -0.45
AP001208.1-201ENST00000518612 ADRA2BP18089 450 aa12.13□□□□□ -0.47
AP001208.1-201ENST00000518612 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
AP001208.1-201ENST00000518612 ERCC6Q03468 1493 aa12.03□□□□□ -0.48
AP001208.1-201ENST00000518612 SCRIBQ14160 1630 aa12.02□□□□□ -0.49
AP001208.1-201ENST00000518612 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
AP001208.1-201ENST00000518612 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
AP001208.1-201ENST00000518612 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
AP001208.1-201ENST00000518612 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
AP001208.1-201ENST00000518612 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
AP001208.1-201ENST00000518612 MSH5O43196 834 aa11.68□□□□□ -0.54
AP001208.1-201ENST00000518612 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
AP001208.1-201ENST00000518612 NESP48681 1621 aa11.64□□□□□ -0.55
AP001208.1-201ENST00000518612 SMARCA2P51531 1590 aa11.62□□□□□ -0.55
AP001208.1-201ENST00000518612 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
AP001208.1-201ENST00000518612 BAZ1AQ9NRL2 1556 aaPredicted RBP11.59□□□□□ -0.55
AP001208.1-201ENST00000518612 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
AP001208.1-201ENST00000518612 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
AP001208.1-201ENST00000518612 ATAD2BQ9ULI0 1458 aa11.54□□□□□ -0.56
AP001208.1-201ENST00000518612 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
AP001208.1-201ENST00000518612 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
AP001208.1-201ENST00000518612 RIMBP3CA6NJZ7 1639 aa11.46□□□□□ -0.58
AP001208.1-201ENST00000518612 RIMBP3BA6NNM3 1639 aa11.46□□□□□ -0.58
AP001208.1-201ENST00000518612 RIMBP3Q9UFD9 1639 aa11.46□□□□□ -0.58
AP001208.1-201ENST00000518612 WDR62O43379 1518 aa11.45□□□□□ -0.58
AP001208.1-201ENST00000518612 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
AP001208.1-201ENST00000518612 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
AP001208.1-201ENST00000518612 SMARCA4P51532 1647 aa11.42□□□□□ -0.58
AP001208.1-201ENST00000518612 ARHGEF11O15085 1522 aa11.35□□□□□ -0.59
AP001208.1-201ENST00000518612 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
AP001208.1-201ENST00000518612 PEG3Q9GZU2 1588 aa11.32□□□□□ -0.6
AP001208.1-201ENST00000518612 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
AP001208.1-201ENST00000518612 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
AP001208.1-201ENST00000518612 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
AP001208.1-201ENST00000518612 CYB5RLQ6IPT4 315 aa11.22□□□□□ -0.61
AP001208.1-201ENST00000518612 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
AP001208.1-201ENST00000518612 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
AP001208.1-201ENST00000518612 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
AP001208.1-201ENST00000518612 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
AP001208.1-201ENST00000518612 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
AP001208.1-201ENST00000518612 IFT140Q96RY7 1462 aa11.07□□□□□ -0.64
AP001208.1-201ENST00000518612 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
AP001208.1-201ENST00000518612 CHD1O14646 1710 aa11.06□□□□□ -0.64
AP001208.1-201ENST00000518612 ILDR1Q86SU0 546 aaPredicted RBP11.06□□□□□ -0.64
AP001208.1-201ENST00000518612 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
AP001208.1-201ENST00000518612 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
AP001208.1-201ENST00000518612 CFTRP13569 1480 aa11.03□□□□□ -0.64
AP001208.1-201ENST00000518612 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
AP001208.1-201ENST00000518612 NCBP3Q53F19 620 aaKnown RBP10.98□□□□□ -0.65
AP001208.1-201ENST00000518612 PRDM2Q13029 1718 aa10.96□□□□□ -0.65
AP001208.1-201ENST00000518612 KCNA4P22459 653 aa10.96□□□□□ -0.65
AP001208.1-201ENST00000518612 SUPT5HO00267 1087 aaKnown RBP10.95□□□□□ -0.66
AP001208.1-201ENST00000518612 WIZO95785 1651 aa10.92□□□□□ -0.66
AP001208.1-201ENST00000518612 FBLN2P98095 1184 aa10.92□□□□□ -0.66
AP001208.1-201ENST00000518612 CNKSR2Q8WXI2 1034 aa10.92□□□□□ -0.66
AP001208.1-201ENST00000518612 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
AP001208.1-201ENST00000518612 SYNJ1O43426 1573 aa10.9□□□□□ -0.67
AP001208.1-201ENST00000518612 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
AP001208.1-201ENST00000518612 ABCC8Q09428 1581 aa10.88□□□□□ -0.67
AP001208.1-201ENST00000518612 DMRT2Q9Y5R5 561 aa10.88□□□□□ -0.67
AP001208.1-201ENST00000518612 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.67
AP001208.1-201ENST00000518612 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
AP001208.1-201ENST00000518612 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
AP001208.1-201ENST00000518612 GAPVD1Q14C86 1478 aa10.83□□□□□ -0.68
AP001208.1-201ENST00000518612 WDR97A6NE52 1622 aa10.8□□□□□ -0.68
AP001208.1-201ENST00000518612 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
AP001208.1-201ENST00000518612 SNAPC4Q5SXM2 1469 aa10.79□□□□□ -0.68
AP001208.1-201ENST00000518612 NPM3O75607 178 aaKnown RBP10.77□□□□□ -0.69
AP001208.1-201ENST00000518612 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.69
AP001208.1-201ENST00000518612 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
AP001208.1-201ENST00000518612 ERCC6L2Q5T890 1561 aa10.76□□□□□ -0.69
AP001208.1-201ENST00000518612 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
AP001208.1-201ENST00000518612 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
AP001208.1-201ENST00000518612 SYNJ2O15056 1496 aa10.73□□□□□ -0.69
AP001208.1-201ENST00000518612 KDM4FA0A1W2PPD8 638 aa10.72□□□□□ -0.69
AP001208.1-201ENST00000518612 RNF216Q9NWF9 866 aaPredicted RBP10.71□□□□□ -0.69
AP001208.1-201ENST00000518612 KDM6BO15054 1643 aa10.7□□□□□ -0.7
AP001208.1-201ENST00000518612 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms