RNA–Protein interactions for RNA: ENST00000518549.1

CPA6-203, Transcript of carboxypeptidase A6, humanhuman

TSL 1 (best)

Gene CPA6, Length 1,538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA6-203ENST00000518549 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
CPA6-203ENST00000518549 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
CPA6-203ENST00000518549 ABCC9O60706 1549 aa27.05■■□□□ 1.92
CPA6-203ENST00000518549 ZCCHC6Q5VYS8 1495 aaKnown RBP26.45■■□□□ 1.82
CPA6-203ENST00000518549 DCAF8L2P0C7V8 631 aa26.19■■□□□ 1.78
CPA6-203ENST00000518549 NACADO15069 1562 aa26.19■■□□□ 1.78
CPA6-203ENST00000518549 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
CPA6-203ENST00000518549 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
CPA6-203ENST00000518549 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
CPA6-203ENST00000518549 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
CPA6-203ENST00000518549 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
CPA6-203ENST00000518549 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.66
CPA6-203ENST00000518549 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
CPA6-203ENST00000518549 SHROOM4Q9ULL8 1493 aa25.19■■□□□ 1.62
CPA6-203ENST00000518549 EIF4G1Q04637 1599 aaKnown RBP24.68■■□□□ 1.54
CPA6-203ENST00000518549 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
CPA6-203ENST00000518549 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
CPA6-203ENST00000518549 CC2D2AQ9P2K1 1620 aa24.49■■□□□ 1.51
CPA6-203ENST00000518549 SMARCA4P51532 1647 aa24.49■■□□□ 1.51
CPA6-203ENST00000518549 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
CPA6-203ENST00000518549 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
CPA6-203ENST00000518549 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
CPA6-203ENST00000518549 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
CPA6-203ENST00000518549 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
CPA6-203ENST00000518549 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
CPA6-203ENST00000518549 WIZO95785 1651 aa24.16■■□□□ 1.46
CPA6-203ENST00000518549 NCAPD3P42695 1498 aa24.15■■□□□ 1.46
CPA6-203ENST00000518549 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
CPA6-203ENST00000518549 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
CPA6-203ENST00000518549 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
CPA6-203ENST00000518549 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
CPA6-203ENST00000518549 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
CPA6-203ENST00000518549 NESP48681 1621 aa23.53■■□□□ 1.36
CPA6-203ENST00000518549 LAMC3Q9Y6N6 1575 aa23.49■■□□□ 1.35
CPA6-203ENST00000518549 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
CPA6-203ENST00000518549 CFTRP13569 1480 aa23.42■■□□□ 1.34
CPA6-203ENST00000518549 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
CPA6-203ENST00000518549 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
CPA6-203ENST00000518549 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
CPA6-203ENST00000518549 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
CPA6-203ENST00000518549 FANCD2Q9BXW9 1451 aa23.22■■□□□ 1.31
CPA6-203ENST00000518549 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
CPA6-203ENST00000518549 THOC2Q8NI27 1593 aaKnown RBP23.13■■□□□ 1.29
CPA6-203ENST00000518549 MRC2Q9UBG0 1479 aa23.06■■□□□ 1.28
CPA6-203ENST00000518549 WDR62O43379 1518 aa23■■□□□ 1.27
CPA6-203ENST00000518549 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
CPA6-203ENST00000518549 ABCC8Q09428 1581 aa22.9■■□□□ 1.26
CPA6-203ENST00000518549 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
CPA6-203ENST00000518549 TOPBP1Q92547 1522 aa22.9■■□□□ 1.26
CPA6-203ENST00000518549 CUX2O14529 1486 aa22.9■■□□□ 1.26
CPA6-203ENST00000518549 CUX1P39880 1505 aa22.87■■□□□ 1.25
CPA6-203ENST00000518549 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
CPA6-203ENST00000518549 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
CPA6-203ENST00000518549 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
CPA6-203ENST00000518549 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
CPA6-203ENST00000518549 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
CPA6-203ENST00000518549 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
CPA6-203ENST00000518549 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
CPA6-203ENST00000518549 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.22
CPA6-203ENST00000518549 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
CPA6-203ENST00000518549 SOGA1O94964 1423 aa22.59■■□□□ 1.21
CPA6-203ENST00000518549 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
CPA6-203ENST00000518549 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
CPA6-203ENST00000518549 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.19
CPA6-203ENST00000518549 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
CPA6-203ENST00000518549 AQRO60306 1485 aaKnown RBP eCLIP22.45■■□□□ 1.18
CPA6-203ENST00000518549 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
CPA6-203ENST00000518549 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
CPA6-203ENST00000518549 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
CPA6-203ENST00000518549 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
CPA6-203ENST00000518549 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
CPA6-203ENST00000518549 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
CPA6-203ENST00000518549 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
CPA6-203ENST00000518549 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
CPA6-203ENST00000518549 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
CPA6-203ENST00000518549 RUSC2Q8N2Y8 1516 aa22.25■■□□□ 1.15
CPA6-203ENST00000518549 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
CPA6-203ENST00000518549 MAGI1Q96QZ7 1491 aaPredicted RBP22.22■■□□□ 1.15
CPA6-203ENST00000518549 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
CPA6-203ENST00000518549 IGF1RP08069 1367 aa22.15■■□□□ 1.14
CPA6-203ENST00000518549 CHD1O14646 1710 aa22.15■■□□□ 1.14
CPA6-203ENST00000518549 SYNJ2O15056 1496 aa22.14■■□□□ 1.13
CPA6-203ENST00000518549 CUL7Q14999 1698 aa22.12■■□□□ 1.13
CPA6-203ENST00000518549 FHAD1B1AJZ9 1412 aa22.11■■□□□ 1.13
CPA6-203ENST00000518549 EEA1Q15075 1411 aa22.06■■□□□ 1.12
CPA6-203ENST00000518549 FBLN2P98095 1184 aa22.06■■□□□ 1.12
CPA6-203ENST00000518549 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
CPA6-203ENST00000518549 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
CPA6-203ENST00000518549 CARMIL1Q5VZK9 1371 aa22.02■■□□□ 1.12
CPA6-203ENST00000518549 FAM9AQ8IZU1 332 aaPredicted RBP22■■□□□ 1.11
CPA6-203ENST00000518549 PRXQ9BXM0 1461 aa21.98■■□□□ 1.11
CPA6-203ENST00000518549 CEP170Q5SW79 1584 aa21.96■■□□□ 1.11
CPA6-203ENST00000518549 CSRNP3Q8WYN3 585 aa21.96■■□□□ 1.11
CPA6-203ENST00000518549 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
CPA6-203ENST00000518549 NUP160Q12769 1436 aa21.93■■□□□ 1.1
CPA6-203ENST00000518549 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
CPA6-203ENST00000518549 CLASP1Q7Z460 1538 aa21.91■■□□□ 1.1
CPA6-203ENST00000518549 KIF21BO75037 1637 aa21.88■■□□□ 1.09
CPA6-203ENST00000518549 CTTNBP2Q8WZ74 1663 aa21.78■■□□□ 1.08
CPA6-203ENST00000518549 KIAA0586Q9BVV6 1533 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms