RNA–Protein interactions for RNA: ENST00000518509.5

PTK2-209, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-209ENST00000518509 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
PTK2-209ENST00000518509 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
PTK2-209ENST00000518509 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
PTK2-209ENST00000518509 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
PTK2-209ENST00000518509 ABCC9O60706 1549 aa14.92□□□□□ -0.02
PTK2-209ENST00000518509 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
PTK2-209ENST00000518509 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
PTK2-209ENST00000518509 PHF23Q9BUL5 403 aaPredicted RBP14.47□□□□□ -0.09
PTK2-209ENST00000518509 NACADO15069 1562 aa14.31□□□□□ -0.12
PTK2-209ENST00000518509 RB1CC1Q8TDY2 1594 aa14.3□□□□□ -0.12
PTK2-209ENST00000518509 ZCCHC6Q5VYS8 1495 aaKnown RBP14.29□□□□□ -0.12
PTK2-209ENST00000518509 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
PTK2-209ENST00000518509 DCAF1Q9Y4B6 1507 aa14.2□□□□□ -0.14
PTK2-209ENST00000518509 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
PTK2-209ENST00000518509 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
PTK2-209ENST00000518509 BICRAQ9NZM4 1560 aa13.83□□□□□ -0.19
PTK2-209ENST00000518509 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
PTK2-209ENST00000518509 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
PTK2-209ENST00000518509 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
PTK2-209ENST00000518509 FOXD1Q16676 465 aa13.64□□□□□ -0.23
PTK2-209ENST00000518509 EIF4G1Q04637 1599 aaKnown RBP13.49□□□□□ -0.25
PTK2-209ENST00000518509 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
PTK2-209ENST00000518509 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
PTK2-209ENST00000518509 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
PTK2-209ENST00000518509 NCAPD3P42695 1498 aa13.27□□□□□ -0.29
PTK2-209ENST00000518509 ATAD2BQ9ULI0 1458 aa13.26□□□□□ -0.29
PTK2-209ENST00000518509 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
PTK2-209ENST00000518509 MROH2BQ7Z745 1585 aa13.22□□□□□ -0.29
PTK2-209ENST00000518509 SMARCA2P51531 1590 aa13.21□□□□□ -0.29
PTK2-209ENST00000518509 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
PTK2-209ENST00000518509 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
PTK2-209ENST00000518509 PEG3Q9GZU2 1588 aa13.13□□□□□ -0.31
PTK2-209ENST00000518509 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
PTK2-209ENST00000518509 PLPPR3Q6T4P5 718 aa13.09□□□□□ -0.31
PTK2-209ENST00000518509 WIZO95785 1651 aa13□□□□□ -0.33
PTK2-209ENST00000518509 TOP2AP11388 1531 aaKnown RBP12.93□□□□□ -0.34
PTK2-209ENST00000518509 CADPSQ9ULU8 1353 aa12.92□□□□□ -0.34
PTK2-209ENST00000518509 SUPT5HO00267 1087 aaKnown RBP12.9□□□□□ -0.34
PTK2-209ENST00000518509 NESP48681 1621 aa12.89□□□□□ -0.35
PTK2-209ENST00000518509 ERCC6Q03468 1493 aa12.88□□□□□ -0.35
PTK2-209ENST00000518509 PDS5BQ9NTI5 1447 aa12.85□□□□□ -0.35
PTK2-209ENST00000518509 CCDC88BA6NC98 1476 aa12.83□□□□□ -0.36
PTK2-209ENST00000518509 LAMC3Q9Y6N6 1575 aa12.82□□□□□ -0.36
PTK2-209ENST00000518509 PIAS4Q8N2W9 510 aaPredicted RBP12.81□□□□□ -0.36
PTK2-209ENST00000518509 CFTRP13569 1480 aa12.8□□□□□ -0.36
PTK2-209ENST00000518509 ADRA2BP18089 450 aa12.78□□□□□ -0.36
PTK2-209ENST00000518509 PPP6R1Q9UPN7 881 aa12.78□□□□□ -0.36
PTK2-209ENST00000518509 MSH5O43196 834 aa12.77□□□□□ -0.37
PTK2-209ENST00000518509 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
PTK2-209ENST00000518509 CUX2O14529 1486 aa12.7□□□□□ -0.38
PTK2-209ENST00000518509 CEP164Q9UPV0 1460 aa12.68□□□□□ -0.38
PTK2-209ENST00000518509 MRC2Q9UBG0 1479 aa12.66□□□□□ -0.38
PTK2-209ENST00000518509 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
PTK2-209ENST00000518509 KIF21AQ7Z4S6 1674 aa12.59□□□□□ -0.39
PTK2-209ENST00000518509 WDR62O43379 1518 aa12.57□□□□□ -0.4
PTK2-209ENST00000518509 URB2Q14146 1524 aaKnown RBP12.56□□□□□ -0.4
PTK2-209ENST00000518509 ABCC8Q09428 1581 aa12.52□□□□□ -0.4
PTK2-209ENST00000518509 TOPBP1Q92547 1522 aa12.49□□□□□ -0.41
PTK2-209ENST00000518509 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
PTK2-209ENST00000518509 IFT140Q96RY7 1462 aa12.44□□□□□ -0.42
PTK2-209ENST00000518509 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
PTK2-209ENST00000518509 SOGA1O94964 1423 aa12.4□□□□□ -0.42
PTK2-209ENST00000518509 POTEDQ86YR6 584 aa12.4□□□□□ -0.42
PTK2-209ENST00000518509 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.43
PTK2-209ENST00000518509 CUX1P39880 1505 aa12.39□□□□□ -0.43
PTK2-209ENST00000518509 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
PTK2-209ENST00000518509 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
PTK2-209ENST00000518509 FGD5Q6ZNL6 1462 aa12.36□□□□□ -0.43
PTK2-209ENST00000518509 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
PTK2-209ENST00000518509 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
PTK2-209ENST00000518509 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
PTK2-209ENST00000518509 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.444e-7■■□□□ 11.5
PTK2-209ENST00000518509 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
PTK2-209ENST00000518509 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
PTK2-209ENST00000518509 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
PTK2-209ENST00000518509 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
PTK2-209ENST00000518509 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
PTK2-209ENST00000518509 FBLN2P98095 1184 aa12.25□□□□□ -0.45
PTK2-209ENST00000518509 EIF4G3O43432 1585 aaKnown RBP12.22□□□□□ -0.45
PTK2-209ENST00000518509 GRIN2BQ13224 1484 aa12.22□□□□□ -0.45
PTK2-209ENST00000518509 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
PTK2-209ENST00000518509 CHMP7Q8WUX9 453 aaPredicted RBP12.22□□□□□ -0.45
PTK2-209ENST00000518509 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
PTK2-209ENST00000518509 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
PTK2-209ENST00000518509 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
PTK2-209ENST00000518509 SNAPC4Q5SXM2 1469 aa12.18□□□□□ -0.46
PTK2-209ENST00000518509 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
PTK2-209ENST00000518509 KIF27Q86VH2 1401 aa12.15□□□□□ -0.46
PTK2-209ENST00000518509 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
PTK2-209ENST00000518509 IGF1RP08069 1367 aa12.12□□□□□ -0.47
PTK2-209ENST00000518509 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
PTK2-209ENST00000518509 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
PTK2-209ENST00000518509 ERICH3Q5RHP9 1530 aa12.09□□□□□ -0.47
PTK2-209ENST00000518509 GRIN2AQ12879 1464 aa12.04□□□□□ -0.48
PTK2-209ENST00000518509 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
PTK2-209ENST00000518509 ADAMTS12P58397 1594 aa12.01□□□□□ -0.49
PTK2-209ENST00000518509 PBRM1Q86U86 1689 aa12.01□□□□□ -0.49
PTK2-209ENST00000518509 NUP160Q12769 1436 aa12□□□□□ -0.49
PTK2-209ENST00000518509 RUSC2Q8N2Y8 1516 aa11.99□□□□□ -0.49
PTK2-209ENST00000518509 CHD1O14646 1710 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms