RNA–Protein interactions for RNA: ENST00000518351.2

PCNX2-220, Transcript of pecanex 2, humanhuman

TSL 4

Gene PCNX2, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-220ENST00000518351 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
PCNX2-220ENST00000518351 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
PCNX2-220ENST00000518351 ZCCHC6Q5VYS8 1495 aaKnown RBP21.83■■□□□ 1.08
PCNX2-220ENST00000518351 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
PCNX2-220ENST00000518351 ABCC9O60706 1549 aa21.55■■□□□ 1.04
PCNX2-220ENST00000518351 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
PCNX2-220ENST00000518351 NACADO15069 1562 aa21.32■■□□□ 1
PCNX2-220ENST00000518351 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
PCNX2-220ENST00000518351 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.98
PCNX2-220ENST00000518351 SHROOM4Q9ULL8 1493 aa20.82■□□□□ 0.92
PCNX2-220ENST00000518351 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
PCNX2-220ENST00000518351 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
PCNX2-220ENST00000518351 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.9
PCNX2-220ENST00000518351 BICRAQ9NZM4 1560 aa20.45■□□□□ 0.86
PCNX2-220ENST00000518351 PABPN1Q86U42 306 aaKnown RBP eCLIP20.23■□□□□ 0.83
PCNX2-220ENST00000518351 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
PCNX2-220ENST00000518351 CECR2Q9BXF3 1484 aa20.11■□□□□ 0.81
PCNX2-220ENST00000518351 RSF1Q96T23 1441 aaPredicted RBP20.07■□□□□ 0.8
PCNX2-220ENST00000518351 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
PCNX2-220ENST00000518351 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
PCNX2-220ENST00000518351 SUPT5HO00267 1087 aaKnown RBP20■□□□□ 0.79
PCNX2-220ENST00000518351 PEG3Q9GZU2 1588 aa19.88■□□□□ 0.77
PCNX2-220ENST00000518351 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
PCNX2-220ENST00000518351 WIZO95785 1651 aa19.82■□□□□ 0.76
PCNX2-220ENST00000518351 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
PCNX2-220ENST00000518351 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
PCNX2-220ENST00000518351 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
PCNX2-220ENST00000518351 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
PCNX2-220ENST00000518351 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
PCNX2-220ENST00000518351 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
PCNX2-220ENST00000518351 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
PCNX2-220ENST00000518351 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
PCNX2-220ENST00000518351 CHIC1Q5VXU3 224 aa19.4■□□□□ 0.7
PCNX2-220ENST00000518351 CFTRP13569 1480 aa19.15■□□□□ 0.66
PCNX2-220ENST00000518351 DNAJC5BQ9UF47 199 aa19.12■□□□□ 0.65
PCNX2-220ENST00000518351 CADPSQ9ULU8 1353 aa19.1■□□□□ 0.65
PCNX2-220ENST00000518351 PRDM2Q13029 1718 aa19.08■□□□□ 0.65
PCNX2-220ENST00000518351 LAMC3Q9Y6N6 1575 aa19.03■□□□□ 0.64
PCNX2-220ENST00000518351 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
PCNX2-220ENST00000518351 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
PCNX2-220ENST00000518351 ABCC8Q09428 1581 aa18.89■□□□□ 0.62
PCNX2-220ENST00000518351 PDS5BQ9NTI5 1447 aa18.87■□□□□ 0.61
PCNX2-220ENST00000518351 NESP48681 1621 aa18.85■□□□□ 0.61
PCNX2-220ENST00000518351 FANCD2Q9BXW9 1451 aa18.85■□□□□ 0.61
PCNX2-220ENST00000518351 TOP2BQ02880 1626 aa18.81■□□□□ 0.6
PCNX2-220ENST00000518351 BIVM-ERCC5R4GMW8 1640 aa18.81■□□□□ 0.6
PCNX2-220ENST00000518351 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
PCNX2-220ENST00000518351 CEP164Q9UPV0 1460 aa18.77■□□□□ 0.59
PCNX2-220ENST00000518351 CUX1P39880 1505 aa18.74■□□□□ 0.59
PCNX2-220ENST00000518351 KIF21AQ7Z4S6 1674 aa18.69■□□□□ 0.58
PCNX2-220ENST00000518351 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
PCNX2-220ENST00000518351 EEA1Q15075 1411 aa18.66■□□□□ 0.58
PCNX2-220ENST00000518351 TOPBP1Q92547 1522 aa18.64■□□□□ 0.57
PCNX2-220ENST00000518351 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
PCNX2-220ENST00000518351 MRC2Q9UBG0 1479 aa18.6■□□□□ 0.57
PCNX2-220ENST00000518351 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
PCNX2-220ENST00000518351 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
PCNX2-220ENST00000518351 WDR62O43379 1518 aa18.53■□□□□ 0.56
PCNX2-220ENST00000518351 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
PCNX2-220ENST00000518351 SOGA1O94964 1423 aa18.52■□□□□ 0.56
PCNX2-220ENST00000518351 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
PCNX2-220ENST00000518351 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
PCNX2-220ENST00000518351 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
PCNX2-220ENST00000518351 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
PCNX2-220ENST00000518351 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
PCNX2-220ENST00000518351 FAM9AQ8IZU1 332 aaPredicted RBP18.41■□□□□ 0.54
PCNX2-220ENST00000518351 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
PCNX2-220ENST00000518351 CUX2O14529 1486 aa18.39■□□□□ 0.54
PCNX2-220ENST00000518351 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
PCNX2-220ENST00000518351 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
PCNX2-220ENST00000518351 IFT140Q96RY7 1462 aa18.38■□□□□ 0.53
PCNX2-220ENST00000518351 KIF21BO75037 1637 aa18.35■□□□□ 0.53
PCNX2-220ENST00000518351 PRXQ9BXM0 1461 aa18.31■□□□□ 0.52
PCNX2-220ENST00000518351 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
PCNX2-220ENST00000518351 IGF1RP08069 1367 aa18.3■□□□□ 0.52
PCNX2-220ENST00000518351 LOC105371045A0A1W2PR82 267 aa18.3■□□□□ 0.52
PCNX2-220ENST00000518351 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
PCNX2-220ENST00000518351 GOLGA3Q08378 1498 aa18.29■□□□□ 0.52
PCNX2-220ENST00000518351 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
PCNX2-220ENST00000518351 CUL7Q14999 1698 aa18.25■□□□□ 0.51
PCNX2-220ENST00000518351 TDRD9Q8NDG6 1382 aaKnown RBP18.22■□□□□ 0.51
PCNX2-220ENST00000518351 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
PCNX2-220ENST00000518351 CARMIL1Q5VZK9 1371 aa18.21■□□□□ 0.51
PCNX2-220ENST00000518351 RAPGEF2Q9Y4G8 1499 aa18.19■□□□□ 0.5
PCNX2-220ENST00000518351 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
PCNX2-220ENST00000518351 PBRM1Q86U86 1689 aa18.17■□□□□ 0.5
PCNX2-220ENST00000518351 ZNF608Q9ULD9 1512 aaPredicted RBP18.15■□□□□ 0.5
PCNX2-220ENST00000518351 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.5
PCNX2-220ENST00000518351 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
PCNX2-220ENST00000518351 UBTFP17480 764 aaKnown RBP18.12■□□□□ 0.49
PCNX2-220ENST00000518351 FHAD1B1AJZ9 1412 aa18.1■□□□□ 0.49
PCNX2-220ENST00000518351 MAGI1Q96QZ7 1491 aaPredicted RBP18.08■□□□□ 0.49
PCNX2-220ENST00000518351 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
PCNX2-220ENST00000518351 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
PCNX2-220ENST00000518351 CEP162Q5TB80 1403 aa18.03■□□□□ 0.48
PCNX2-220ENST00000518351 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
PCNX2-220ENST00000518351 SYNJ2O15056 1496 aa17.98■□□□□ 0.47
PCNX2-220ENST00000518351 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
PCNX2-220ENST00000518351 CLIP1P30622 1438 aa17.95■□□□□ 0.46
PCNX2-220ENST00000518351 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms