RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 NISCHQ9Y2I1 1504 aa18.37■□□□□ 0.53
ARFGEF1-204ENST00000518290 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
ARFGEF1-204ENST00000518290 ZCCHC6Q5VYS8 1495 aaKnown RBP15.55■□□□□ 0.08
ARFGEF1-204ENST00000518290 DCAF1Q9Y4B6 1507 aa15.44■□□□□ 0.06
ARFGEF1-204ENST00000518290 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
ARFGEF1-204ENST00000518290 NACADO15069 1562 aa14.89□□□□□ -0.03
ARFGEF1-204ENST00000518290 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
ARFGEF1-204ENST00000518290 ABCC9O60706 1549 aa14.63□□□□□ -0.07
ARFGEF1-204ENST00000518290 SCRIBQ14160 1630 aa14.53□□□□□ -0.08
ARFGEF1-204ENST00000518290 SHROOM4Q9ULL8 1493 aa14.53□□□□□ -0.08
ARFGEF1-204ENST00000518290 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.09
ARFGEF1-204ENST00000518290 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
ARFGEF1-204ENST00000518290 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
ARFGEF1-204ENST00000518290 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
ARFGEF1-204ENST00000518290 BAZ1AQ9NRL2 1556 aaPredicted RBP14.18□□□□□ -0.14
ARFGEF1-204ENST00000518290 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
ARFGEF1-204ENST00000518290 SMARCA4P51532 1647 aa14.13□□□□□ -0.15
ARFGEF1-204ENST00000518290 MROH2BQ7Z745 1585 aa14.12□□□□□ -0.15
ARFGEF1-204ENST00000518290 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
ARFGEF1-204ENST00000518290 WIZO95785 1651 aa14.04□□□□□ -0.16
ARFGEF1-204ENST00000518290 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.16
ARFGEF1-204ENST00000518290 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
ARFGEF1-204ENST00000518290 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
ARFGEF1-204ENST00000518290 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
ARFGEF1-204ENST00000518290 CHIC1Q5VXU3 224 aa13.78□□□□□ -0.2
ARFGEF1-204ENST00000518290 HMGXB3Q12766 1538 aa13.78□□□□□ -0.2
ARFGEF1-204ENST00000518290 ATAD2BQ9ULI0 1458 aa13.74□□□□□ -0.21
ARFGEF1-204ENST00000518290 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.22
ARFGEF1-204ENST00000518290 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
ARFGEF1-204ENST00000518290 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
ARFGEF1-204ENST00000518290 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
ARFGEF1-204ENST00000518290 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
ARFGEF1-204ENST00000518290 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
ARFGEF1-204ENST00000518290 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
ARFGEF1-204ENST00000518290 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
ARFGEF1-204ENST00000518290 ABCC8Q09428 1581 aa13.4□□□□□ -0.26
ARFGEF1-204ENST00000518290 CFTRP13569 1480 aa13.4□□□□□ -0.27
ARFGEF1-204ENST00000518290 SYNJ1O43426 1573 aa13.38□□□□□ -0.27
ARFGEF1-204ENST00000518290 EEA1Q15075 1411 aa13.37□□□□□ -0.27
ARFGEF1-204ENST00000518290 WRNQ14191 1432 aaPredicted RBP eCLIP13.32□□□□□ -0.28
ARFGEF1-204ENST00000518290 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
ARFGEF1-204ENST00000518290 KIF21BO75037 1637 aa13.29□□□□□ -0.28
ARFGEF1-204ENST00000518290 CUX1P39880 1505 aa13.22□□□□□ -0.29
ARFGEF1-204ENST00000518290 LAMC3Q9Y6N6 1575 aa13.22□□□□□ -0.29
ARFGEF1-204ENST00000518290 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
ARFGEF1-204ENST00000518290 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
ARFGEF1-204ENST00000518290 WDR97A6NE52 1622 aa13.14□□□□□ -0.31
ARFGEF1-204ENST00000518290 SOGA1O94964 1423 aa13.13□□□□□ -0.31
ARFGEF1-204ENST00000518290 DNMBPQ6XZF7 1577 aa13.12□□□□□ -0.31
ARFGEF1-204ENST00000518290 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
ARFGEF1-204ENST00000518290 GOLGA3Q08378 1498 aa13.09□□□□□ -0.31
ARFGEF1-204ENST00000518290 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
ARFGEF1-204ENST00000518290 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
ARFGEF1-204ENST00000518290 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
ARFGEF1-204ENST00000518290 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
ARFGEF1-204ENST00000518290 FANCD2Q9BXW9 1451 aa13.04□□□□□ -0.32
ARFGEF1-204ENST00000518290 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
ARFGEF1-204ENST00000518290 ABCA10Q8WWZ4 1543 aa12.99□□□□□ -0.33
ARFGEF1-204ENST00000518290 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
ARFGEF1-204ENST00000518290 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
ARFGEF1-204ENST00000518290 ABCA5Q8WWZ7 1642 aa12.97□□□□□ -0.33
ARFGEF1-204ENST00000518290 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
ARFGEF1-204ENST00000518290 CUL7Q14999 1698 aa12.97□□□□□ -0.33
ARFGEF1-204ENST00000518290 CEP162Q5TB80 1403 aa12.96□□□□□ -0.34
ARFGEF1-204ENST00000518290 KIF27Q86VH2 1401 aa12.96□□□□□ -0.34
ARFGEF1-204ENST00000518290 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
ARFGEF1-204ENST00000518290 NESP48681 1621 aa12.93□□□□□ -0.34
ARFGEF1-204ENST00000518290 TARBP1Q13395 1621 aaKnown RBP12.92□□□□□ -0.34
ARFGEF1-204ENST00000518290 RAPGEF2Q9Y4G8 1499 aa12.92□□□□□ -0.34
ARFGEF1-204ENST00000518290 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
ARFGEF1-204ENST00000518290 PDS5BQ9NTI5 1447 aa12.91□□□□□ -0.34
ARFGEF1-204ENST00000518290 WDR62O43379 1518 aa12.88□□□□□ -0.35
ARFGEF1-204ENST00000518290 CTTNBP2Q8WZ74 1663 aa12.86□□□□□ -0.35
ARFGEF1-204ENST00000518290 PBRM1Q86U86 1689 aa12.83□□□□□ -0.36
ARFGEF1-204ENST00000518290 CUX2O14529 1486 aa12.83□□□□□ -0.36
ARFGEF1-204ENST00000518290 THOC2Q8NI27 1593 aaKnown RBP12.82□□□□□ -0.36
ARFGEF1-204ENST00000518290 IGF1RP08069 1367 aa12.82□□□□□ -0.36
ARFGEF1-204ENST00000518290 FAM9AQ8IZU1 332 aaPredicted RBP12.82□□□□□ -0.36
ARFGEF1-204ENST00000518290 MRC2Q9UBG0 1479 aa12.82□□□□□ -0.36
ARFGEF1-204ENST00000518290 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
ARFGEF1-204ENST00000518290 ARAP1Q96P48 1450 aa12.79□□□□□ -0.36
ARFGEF1-204ENST00000518290 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
ARFGEF1-204ENST00000518290 CLIP1P30622 1438 aa12.78□□□□□ -0.36
ARFGEF1-204ENST00000518290 MAP3K1Q13233 1512 aa12.78□□□□□ -0.36
ARFGEF1-204ENST00000518290 EFCAB5A4FU69 1503 aa12.76□□□□□ -0.37
ARFGEF1-204ENST00000518290 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
ARFGEF1-204ENST00000518290 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
ARFGEF1-204ENST00000518290 ADAMTS12P58397 1594 aa12.73□□□□□ -0.37
ARFGEF1-204ENST00000518290 CFAP43Q8NDM7 1665 aa12.72□□□□□ -0.37
ARFGEF1-204ENST00000518290 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
ARFGEF1-204ENST00000518290 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
ARFGEF1-204ENST00000518290 CARMIL1Q5VZK9 1371 aa12.7□□□□□ -0.38
ARFGEF1-204ENST00000518290 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
ARFGEF1-204ENST00000518290 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
ARFGEF1-204ENST00000518290 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
ARFGEF1-204ENST00000518290 EIF4G3O43432 1585 aaKnown RBP12.63□□□□□ -0.39
ARFGEF1-204ENST00000518290 HRCP23327 699 aa12.61□□□□□ -0.39
ARFGEF1-204ENST00000518290 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
ARFGEF1-204ENST00000518290 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
ARFGEF1-204ENST00000518290 GRIN2BQ13224 1484 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms