RNA–Protein interactions for RNA: ENST00000518250.5

BRD9-215, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 689 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-215ENST00000518250 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
BRD9-215ENST00000518250 CCDC180Q9P1Z9 1646 aa30.65■■■□□ 2.5
BRD9-215ENST00000518250 ABCC9O60706 1549 aa29.86■■■□□ 2.37
BRD9-215ENST00000518250 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
BRD9-215ENST00000518250 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
BRD9-215ENST00000518250 RB1CC1Q8TDY2 1594 aa28.77■■■□□ 2.2
BRD9-215ENST00000518250 NACADO15069 1562 aa28.75■■■□□ 2.19
BRD9-215ENST00000518250 MYO15BQ96JP2 1530 aa28.57■■■□□ 2.16
BRD9-215ENST00000518250 DCAF1Q9Y4B6 1507 aa28.53■■■□□ 2.16
BRD9-215ENST00000518250 UNC13AQ9UPW8 1703 aa28.21■■■□□ 2.11
BRD9-215ENST00000518250 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
BRD9-215ENST00000518250 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
BRD9-215ENST00000518250 BICRAQ9NZM4 1560 aa27.88■■■□□ 2.05
BRD9-215ENST00000518250 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
BRD9-215ENST00000518250 DNAJC5BQ9UF47 199 aa27.22■■□□□ 1.95
BRD9-215ENST00000518250 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
BRD9-215ENST00000518250 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.92
BRD9-215ENST00000518250 CECR2Q9BXF3 1484 aa26.89■■□□□ 1.9
BRD9-215ENST00000518250 SMARCA4P51532 1647 aa26.79■■□□□ 1.88
BRD9-215ENST00000518250 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
BRD9-215ENST00000518250 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
BRD9-215ENST00000518250 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
BRD9-215ENST00000518250 SMARCA2P51531 1590 aa26.55■■□□□ 1.84
BRD9-215ENST00000518250 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
BRD9-215ENST00000518250 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
BRD9-215ENST00000518250 HMGXB3Q12766 1538 aa26.4■■□□□ 1.82
BRD9-215ENST00000518250 WIZO95785 1651 aa26.4■■□□□ 1.82
BRD9-215ENST00000518250 BAZ1BQ9UIG0 1483 aaKnown RBP26.38■■□□□ 1.81
BRD9-215ENST00000518250 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
BRD9-215ENST00000518250 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
BRD9-215ENST00000518250 SUPT5HO00267 1087 aaKnown RBP25.89■■□□□ 1.74
BRD9-215ENST00000518250 NESP48681 1621 aa25.88■■□□□ 1.73
BRD9-215ENST00000518250 LAMC3Q9Y6N6 1575 aa25.82■■□□□ 1.72
BRD9-215ENST00000518250 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
BRD9-215ENST00000518250 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
BRD9-215ENST00000518250 ERCC6Q03468 1493 aa25.73■■□□□ 1.71
BRD9-215ENST00000518250 KIF21AQ7Z4S6 1674 aa25.64■■□□□ 1.69
BRD9-215ENST00000518250 CFTRP13569 1480 aa25.62■■□□□ 1.69
BRD9-215ENST00000518250 PDS5BQ9NTI5 1447 aa25.62■■□□□ 1.69
BRD9-215ENST00000518250 PRDM2Q13029 1718 aa25.57■■□□□ 1.68
BRD9-215ENST00000518250 FANCD2Q9BXW9 1451 aa25.48■■□□□ 1.67
BRD9-215ENST00000518250 THOC2Q8NI27 1593 aaKnown RBP25.45■■□□□ 1.66
BRD9-215ENST00000518250 CEP164Q9UPV0 1460 aa25.45■■□□□ 1.66
BRD9-215ENST00000518250 MRC2Q9UBG0 1479 aa25.37■■□□□ 1.65
BRD9-215ENST00000518250 CUX2O14529 1486 aa25.34■■□□□ 1.65
BRD9-215ENST00000518250 WDR62O43379 1518 aa25.27■■□□□ 1.64
BRD9-215ENST00000518250 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
BRD9-215ENST00000518250 TOPBP1Q92547 1522 aa25.1■■□□□ 1.61
BRD9-215ENST00000518250 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
BRD9-215ENST00000518250 ABCC8Q09428 1581 aa25.08■■□□□ 1.61
BRD9-215ENST00000518250 CUX1P39880 1505 aa24.97■■□□□ 1.59
BRD9-215ENST00000518250 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.57
BRD9-215ENST00000518250 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
BRD9-215ENST00000518250 FGD5Q6ZNL6 1462 aa24.87■■□□□ 1.57
BRD9-215ENST00000518250 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
BRD9-215ENST00000518250 SYNJ1O43426 1573 aa24.82■■□□□ 1.56
BRD9-215ENST00000518250 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
BRD9-215ENST00000518250 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
BRD9-215ENST00000518250 TOP2BQ02880 1626 aa24.8■■□□□ 1.56
BRD9-215ENST00000518250 RAD54L2Q9Y4B4 1467 aa24.8■■□□□ 1.56
BRD9-215ENST00000518250 SOGA1O94964 1423 aa24.79■■□□□ 1.56
BRD9-215ENST00000518250 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
BRD9-215ENST00000518250 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
BRD9-215ENST00000518250 WDR97A6NE52 1622 aa24.68■■□□□ 1.54
BRD9-215ENST00000518250 AQRO60306 1485 aaKnown RBP eCLIP24.67■■□□□ 1.546e-15■■■■■ 62.7
BRD9-215ENST00000518250 TDRD9Q8NDG6 1382 aaKnown RBP24.64■■□□□ 1.53
BRD9-215ENST00000518250 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
BRD9-215ENST00000518250 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
BRD9-215ENST00000518250 PBRM1Q86U86 1689 aa24.53■■□□□ 1.52
BRD9-215ENST00000518250 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
BRD9-215ENST00000518250 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
BRD9-215ENST00000518250 GRIN2BQ13224 1484 aa24.48■■□□□ 1.51
BRD9-215ENST00000518250 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.51
BRD9-215ENST00000518250 CHD1O14646 1710 aa24.43■■□□□ 1.5
BRD9-215ENST00000518250 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
BRD9-215ENST00000518250 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
BRD9-215ENST00000518250 FBLN2P98095 1184 aa24.38■■□□□ 1.49
BRD9-215ENST00000518250 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
BRD9-215ENST00000518250 OSCARQ8IYS5 282 aa24.33■■□□□ 1.49
BRD9-215ENST00000518250 ERICH3Q5RHP9 1530 aa24.32■■□□□ 1.48
BRD9-215ENST00000518250 CHMP7Q8WUX9 453 aaPredicted RBP24.3■■□□□ 1.48
BRD9-215ENST00000518250 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
BRD9-215ENST00000518250 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
BRD9-215ENST00000518250 FHAD1B1AJZ9 1412 aa24.22■■□□□ 1.47
BRD9-215ENST00000518250 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
BRD9-215ENST00000518250 RUSC2Q8N2Y8 1516 aa24.19■■□□□ 1.46
BRD9-215ENST00000518250 IGF1RP08069 1367 aa24.18■■□□□ 1.46
BRD9-215ENST00000518250 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
BRD9-215ENST00000518250 CUL7Q14999 1698 aa24.17■■□□□ 1.46
BRD9-215ENST00000518250 CLASP1Q7Z460 1538 aa24.08■■□□□ 1.45
BRD9-215ENST00000518250 CARMIL1Q5VZK9 1371 aa24.07■■□□□ 1.44
BRD9-215ENST00000518250 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
BRD9-215ENST00000518250 NUP160Q12769 1436 aa24.03■■□□□ 1.44
BRD9-215ENST00000518250 RIMBP3CA6NJZ7 1639 aa23.98■■□□□ 1.43
BRD9-215ENST00000518250 RIMBP3BA6NNM3 1639 aa23.98■■□□□ 1.43
BRD9-215ENST00000518250 RIMBP3Q9UFD9 1639 aa23.98■■□□□ 1.43
BRD9-215ENST00000518250 ARHGEF11O15085 1522 aa23.96■■□□□ 1.43
BRD9-215ENST00000518250 RAPGEF2Q9Y4G8 1499 aa23.95■■□□□ 1.42
BRD9-215ENST00000518250 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
BRD9-215ENST00000518250 EEA1Q15075 1411 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms