RNA–Protein interactions for RNA: ENST00000517913.5

SGCD-203, Transcript of sarcoglycan delta, humanhuman

TSL 5 BASIC

Gene SGCD, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-203ENST00000517913 NISCHQ9Y2I1 1504 aa26.22■■□□□ 1.79
SGCD-203ENST00000517913 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
SGCD-203ENST00000517913 ABCC9O60706 1549 aa22.65■■□□□ 1.22
SGCD-203ENST00000517913 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
SGCD-203ENST00000517913 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.1
SGCD-203ENST00000517913 NACADO15069 1562 aa21.88■■□□□ 1.09
SGCD-203ENST00000517913 ZCCHC6Q5VYS8 1495 aaKnown RBP21.88■■□□□ 1.09
SGCD-203ENST00000517913 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
SGCD-203ENST00000517913 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
SGCD-203ENST00000517913 UNC13AQ9UPW8 1703 aa21.4■■□□□ 1.02
SGCD-203ENST00000517913 SCRIBQ14160 1630 aa21.3■■□□□ 1
SGCD-203ENST00000517913 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
SGCD-203ENST00000517913 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.98
SGCD-203ENST00000517913 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
SGCD-203ENST00000517913 SHROOM4Q9ULL8 1493 aa21.02■□□□□ 0.96
SGCD-203ENST00000517913 EIF4G1Q04637 1599 aaKnown RBP20.63■□□□□ 0.89
SGCD-203ENST00000517913 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
SGCD-203ENST00000517913 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
SGCD-203ENST00000517913 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
SGCD-203ENST00000517913 CECR2Q9BXF3 1484 aa20.36■□□□□ 0.85
SGCD-203ENST00000517913 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
SGCD-203ENST00000517913 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
SGCD-203ENST00000517913 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
SGCD-203ENST00000517913 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
SGCD-203ENST00000517913 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
SGCD-203ENST00000517913 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
SGCD-203ENST00000517913 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
SGCD-203ENST00000517913 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.8
SGCD-203ENST00000517913 WIZO95785 1651 aa20.02■□□□□ 0.8
SGCD-203ENST00000517913 RSF1Q96T23 1441 aaPredicted RBP20■□□□□ 0.79
SGCD-203ENST00000517913 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
SGCD-203ENST00000517913 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
SGCD-203ENST00000517913 LAMC3Q9Y6N6 1575 aa19.65■□□□□ 0.74
SGCD-203ENST00000517913 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
SGCD-203ENST00000517913 NESP48681 1621 aa19.6■□□□□ 0.73
SGCD-203ENST00000517913 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
SGCD-203ENST00000517913 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
SGCD-203ENST00000517913 CCDC88BA6NC98 1476 aa19.54■□□□□ 0.72
SGCD-203ENST00000517913 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
SGCD-203ENST00000517913 CFTRP13569 1480 aa19.47■□□□□ 0.71
SGCD-203ENST00000517913 PRDM2Q13029 1718 aa19.47■□□□□ 0.71
SGCD-203ENST00000517913 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
SGCD-203ENST00000517913 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
SGCD-203ENST00000517913 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
SGCD-203ENST00000517913 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
SGCD-203ENST00000517913 CUX2O14529 1486 aa19.29■□□□□ 0.68
SGCD-203ENST00000517913 MRC2Q9UBG0 1479 aa19.29■□□□□ 0.68
SGCD-203ENST00000517913 WDR62O43379 1518 aa19.22■□□□□ 0.67
SGCD-203ENST00000517913 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
SGCD-203ENST00000517913 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
SGCD-203ENST00000517913 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
SGCD-203ENST00000517913 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
SGCD-203ENST00000517913 CUX1P39880 1505 aa18.95■□□□□ 0.62
SGCD-203ENST00000517913 IFT140Q96RY7 1462 aa18.93■□□□□ 0.62
SGCD-203ENST00000517913 POLA1P09884 1462 aaPredicted RBP18.91■□□□□ 0.62
SGCD-203ENST00000517913 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
SGCD-203ENST00000517913 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.62
SGCD-203ENST00000517913 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
SGCD-203ENST00000517913 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
SGCD-203ENST00000517913 SYNJ1O43426 1573 aa18.85■□□□□ 0.61
SGCD-203ENST00000517913 TARBP1Q13395 1621 aaKnown RBP18.84■□□□□ 0.61
SGCD-203ENST00000517913 SOGA1O94964 1423 aa18.83■□□□□ 0.6
SGCD-203ENST00000517913 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
SGCD-203ENST00000517913 RAD54L2Q9Y4B4 1467 aa18.79■□□□□ 0.6
SGCD-203ENST00000517913 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
SGCD-203ENST00000517913 WDR97A6NE52 1622 aa18.77■□□□□ 0.6
SGCD-203ENST00000517913 ABCA10Q8WWZ4 1543 aa18.71■□□□□ 0.59
SGCD-203ENST00000517913 AQRO60306 1485 aaKnown RBP eCLIP18.7■□□□□ 0.58
SGCD-203ENST00000517913 TDRD9Q8NDG6 1382 aaKnown RBP18.69■□□□□ 0.58
SGCD-203ENST00000517913 PBRM1Q86U86 1689 aa18.65■□□□□ 0.58
SGCD-203ENST00000517913 ABCA5Q8WWZ7 1642 aa18.65■□□□□ 0.58
SGCD-203ENST00000517913 GAPVD1Q14C86 1478 aa18.63■□□□□ 0.57
SGCD-203ENST00000517913 GRIN2BQ13224 1484 aa18.62■□□□□ 0.57
SGCD-203ENST00000517913 SNAPC4Q5SXM2 1469 aa18.58■□□□□ 0.56
SGCD-203ENST00000517913 MAGI1Q96QZ7 1491 aaPredicted RBP18.58■□□□□ 0.56
SGCD-203ENST00000517913 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
SGCD-203ENST00000517913 CHD1O14646 1710 aa18.55■□□□□ 0.56
SGCD-203ENST00000517913 KIF27Q86VH2 1401 aa18.52■□□□□ 0.56
SGCD-203ENST00000517913 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
SGCD-203ENST00000517913 FBLN2P98095 1184 aa18.51■□□□□ 0.55
SGCD-203ENST00000517913 SYNJ2O15056 1496 aa18.49■□□□□ 0.55
SGCD-203ENST00000517913 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
SGCD-203ENST00000517913 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
SGCD-203ENST00000517913 CHMP7Q8WUX9 453 aaPredicted RBP18.48■□□□□ 0.55
SGCD-203ENST00000517913 DNAJC5Q9H3Z4 198 aa18.46■□□□□ 0.55
SGCD-203ENST00000517913 CUL7Q14999 1698 aa18.43■□□□□ 0.54
SGCD-203ENST00000517913 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
SGCD-203ENST00000517913 GRIN2AQ12879 1464 aa18.38■□□□□ 0.53
SGCD-203ENST00000517913 IGF1RP08069 1367 aa18.34■□□□□ 0.53
SGCD-203ENST00000517913 CLASP1Q7Z460 1538 aa18.29■□□□□ 0.52
SGCD-203ENST00000517913 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
SGCD-203ENST00000517913 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
SGCD-203ENST00000517913 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
SGCD-203ENST00000517913 EEA1Q15075 1411 aa18.27■□□□□ 0.52
SGCD-203ENST00000517913 NUP160Q12769 1436 aa18.25■□□□□ 0.51
SGCD-203ENST00000517913 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
SGCD-203ENST00000517913 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
SGCD-203ENST00000517913 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
SGCD-203ENST00000517913 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
SGCD-203ENST00000517913 ARHGEF11O15085 1522 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms