RNA–Protein interactions for RNA: ENST00000517859.5

KHDRBS3-203, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

TSL 2

Gene KHDRBS3, Length 1,066 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-203ENST00000517859 AEBP2Q6ZN18 517 aaPredicted RBP27.9■■■□□ 2.06
KHDRBS3-203ENST00000517859 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
KHDRBS3-203ENST00000517859 CHIC1Q5VXU3 224 aa26.65■■□□□ 1.86
KHDRBS3-203ENST00000517859 CCDC180Q9P1Z9 1646 aa24.08■■□□□ 1.45
KHDRBS3-203ENST00000517859 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
KHDRBS3-203ENST00000517859 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
KHDRBS3-203ENST00000517859 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
KHDRBS3-203ENST00000517859 ABCC9O60706 1549 aa22.9■■□□□ 1.26
KHDRBS3-203ENST00000517859 DCAF1Q9Y4B6 1507 aa22.84■■□□□ 1.25
KHDRBS3-203ENST00000517859 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
KHDRBS3-203ENST00000517859 NACADO15069 1562 aa22.53■■□□□ 1.2
KHDRBS3-203ENST00000517859 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
KHDRBS3-203ENST00000517859 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
KHDRBS3-203ENST00000517859 FOXD1Q16676 465 aa22.18■■□□□ 1.14
KHDRBS3-203ENST00000517859 SHROOM4Q9ULL8 1493 aa21.97■■□□□ 1.11
KHDRBS3-203ENST00000517859 SCRIBQ14160 1630 aa21.96■■□□□ 1.11
KHDRBS3-203ENST00000517859 UNC13AQ9UPW8 1703 aa21.79■■□□□ 1.08
KHDRBS3-203ENST00000517859 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
KHDRBS3-203ENST00000517859 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
KHDRBS3-203ENST00000517859 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
KHDRBS3-203ENST00000517859 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
KHDRBS3-203ENST00000517859 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
KHDRBS3-203ENST00000517859 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
KHDRBS3-203ENST00000517859 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
KHDRBS3-203ENST00000517859 SMARCA4P51532 1647 aa21.14■□□□□ 0.97
KHDRBS3-203ENST00000517859 EIF4G1Q04637 1599 aaKnown RBP21.04■□□□□ 0.96
KHDRBS3-203ENST00000517859 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
KHDRBS3-203ENST00000517859 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
KHDRBS3-203ENST00000517859 WIZO95785 1651 aa20.93■□□□□ 0.94
KHDRBS3-203ENST00000517859 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
KHDRBS3-203ENST00000517859 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
KHDRBS3-203ENST00000517859 PIAS4Q8N2W9 510 aaPredicted RBP20.86■□□□□ 0.93
KHDRBS3-203ENST00000517859 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
KHDRBS3-203ENST00000517859 ADRA2BP18089 450 aa20.83■□□□□ 0.93
KHDRBS3-203ENST00000517859 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
KHDRBS3-203ENST00000517859 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
KHDRBS3-203ENST00000517859 POTEDQ86YR6 584 aa20.78■□□□□ 0.92
KHDRBS3-203ENST00000517859 MSH5O43196 834 aa20.77■□□□□ 0.92
KHDRBS3-203ENST00000517859 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
KHDRBS3-203ENST00000517859 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
KHDRBS3-203ENST00000517859 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
KHDRBS3-203ENST00000517859 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
KHDRBS3-203ENST00000517859 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
KHDRBS3-203ENST00000517859 CFTRP13569 1480 aa20.27■□□□□ 0.84
KHDRBS3-203ENST00000517859 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
KHDRBS3-203ENST00000517859 LAMC3Q9Y6N6 1575 aa20.09■□□□□ 0.81
KHDRBS3-203ENST00000517859 NESP48681 1621 aa20.05■□□□□ 0.8
KHDRBS3-203ENST00000517859 PRDM2Q13029 1718 aa20.01■□□□□ 0.79
KHDRBS3-203ENST00000517859 FANCD2Q9BXW9 1451 aa19.95■□□□□ 0.78
KHDRBS3-203ENST00000517859 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
KHDRBS3-203ENST00000517859 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
KHDRBS3-203ENST00000517859 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
KHDRBS3-203ENST00000517859 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
KHDRBS3-203ENST00000517859 SYNJ1O43426 1573 aa19.83■□□□□ 0.77
KHDRBS3-203ENST00000517859 CUX1P39880 1505 aa19.83■□□□□ 0.77
KHDRBS3-203ENST00000517859 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
KHDRBS3-203ENST00000517859 TOP2BQ02880 1626 aa19.81■□□□□ 0.76
KHDRBS3-203ENST00000517859 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
KHDRBS3-203ENST00000517859 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
KHDRBS3-203ENST00000517859 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
KHDRBS3-203ENST00000517859 DNMBPQ6XZF7 1577 aa19.74■□□□□ 0.75
KHDRBS3-203ENST00000517859 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
KHDRBS3-203ENST00000517859 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
KHDRBS3-203ENST00000517859 WDR62O43379 1518 aa19.64■□□□□ 0.73
KHDRBS3-203ENST00000517859 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
KHDRBS3-203ENST00000517859 FGD5Q6ZNL6 1462 aa19.62■□□□□ 0.73
KHDRBS3-203ENST00000517859 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
KHDRBS3-203ENST00000517859 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
KHDRBS3-203ENST00000517859 SOGA1O94964 1423 aa19.57■□□□□ 0.72
KHDRBS3-203ENST00000517859 EEA1Q15075 1411 aa19.55■□□□□ 0.72
KHDRBS3-203ENST00000517859 CUX2O14529 1486 aa19.53■□□□□ 0.72
KHDRBS3-203ENST00000517859 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.72
KHDRBS3-203ENST00000517859 RUSC2Q8N2Y8 1516 aa19.51■□□□□ 0.71
KHDRBS3-203ENST00000517859 RAD54L2Q9Y4B4 1467 aa19.49■□□□□ 0.71
KHDRBS3-203ENST00000517859 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
KHDRBS3-203ENST00000517859 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
KHDRBS3-203ENST00000517859 IFT140Q96RY7 1462 aa19.43■□□□□ 0.7
KHDRBS3-203ENST00000517859 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
KHDRBS3-203ENST00000517859 CSRNP3Q8WYN3 585 aa19.42■□□□□ 0.7
KHDRBS3-203ENST00000517859 IGF1RP08069 1367 aa19.38■□□□□ 0.69
KHDRBS3-203ENST00000517859 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
KHDRBS3-203ENST00000517859 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
KHDRBS3-203ENST00000517859 PRXQ9BXM0 1461 aa19.33■□□□□ 0.68
KHDRBS3-203ENST00000517859 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
KHDRBS3-203ENST00000517859 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
KHDRBS3-203ENST00000517859 ZNF608Q9ULD9 1512 aaPredicted RBP19.29■□□□□ 0.68
KHDRBS3-203ENST00000517859 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
KHDRBS3-203ENST00000517859 KIF21BO75037 1637 aa19.27■□□□□ 0.68
KHDRBS3-203ENST00000517859 LOC105371045A0A1W2PR82 267 aa19.26■□□□□ 0.67
KHDRBS3-203ENST00000517859 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.67
KHDRBS3-203ENST00000517859 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
KHDRBS3-203ENST00000517859 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
KHDRBS3-203ENST00000517859 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
KHDRBS3-203ENST00000517859 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
KHDRBS3-203ENST00000517859 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
KHDRBS3-203ENST00000517859 CUL7Q14999 1698 aa19.16■□□□□ 0.66
KHDRBS3-203ENST00000517859 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
KHDRBS3-203ENST00000517859 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
KHDRBS3-203ENST00000517859 PBRM1Q86U86 1689 aa19.12■□□□□ 0.65
KHDRBS3-203ENST00000517859 FHAD1B1AJZ9 1412 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms