RNA–Protein interactions for RNA: ENST00000517651.5

CSGALNACT1-205, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-205ENST00000517651 NISCHQ9Y2I1 1504 aa19■□□□□ 0.63
CSGALNACT1-205ENST00000517651 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
CSGALNACT1-205ENST00000517651 ABCC9O60706 1549 aa16.74■□□□□ 0.27
CSGALNACT1-205ENST00000517651 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
CSGALNACT1-205ENST00000517651 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
CSGALNACT1-205ENST00000517651 NACADO15069 1562 aa15.89■□□□□ 0.13
CSGALNACT1-205ENST00000517651 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
CSGALNACT1-205ENST00000517651 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
CSGALNACT1-205ENST00000517651 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
CSGALNACT1-205ENST00000517651 DCAF1Q9Y4B6 1507 aa15.64■□□□□ 0.09
CSGALNACT1-205ENST00000517651 DNAJC5BQ9UF47 199 aa15.54■□□□□ 0.08
CSGALNACT1-205ENST00000517651 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
CSGALNACT1-205ENST00000517651 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
CSGALNACT1-205ENST00000517651 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
CSGALNACT1-205ENST00000517651 SHROOM4Q9ULL8 1493 aa15.23■□□□□ 0.03
CSGALNACT1-205ENST00000517651 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
CSGALNACT1-205ENST00000517651 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
CSGALNACT1-205ENST00000517651 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
CSGALNACT1-205ENST00000517651 ATAD2BQ9ULI0 1458 aa14.73□□□□□ -0.05
CSGALNACT1-205ENST00000517651 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
CSGALNACT1-205ENST00000517651 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
CSGALNACT1-205ENST00000517651 BAZ1AQ9NRL2 1556 aaPredicted RBP14.7□□□□□ -0.06
CSGALNACT1-205ENST00000517651 MROH2BQ7Z745 1585 aa14.67□□□□□ -0.06
CSGALNACT1-205ENST00000517651 SMARCA2P51531 1590 aa14.64□□□□□ -0.07
CSGALNACT1-205ENST00000517651 BAZ1BQ9UIG0 1483 aaKnown RBP14.58□□□□□ -0.08
CSGALNACT1-205ENST00000517651 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
CSGALNACT1-205ENST00000517651 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
CSGALNACT1-205ENST00000517651 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
CSGALNACT1-205ENST00000517651 WIZO95785 1651 aa14.47□□□□□ -0.09
CSGALNACT1-205ENST00000517651 NESP48681 1621 aa14.44□□□□□ -0.1
CSGALNACT1-205ENST00000517651 ERCC6Q03468 1493 aa14.4□□□□□ -0.1
CSGALNACT1-205ENST00000517651 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
CSGALNACT1-205ENST00000517651 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
CSGALNACT1-205ENST00000517651 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
CSGALNACT1-205ENST00000517651 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
CSGALNACT1-205ENST00000517651 CUX2O14529 1486 aa14.23□□□□□ -0.13
CSGALNACT1-205ENST00000517651 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
CSGALNACT1-205ENST00000517651 CFTRP13569 1480 aa14.18□□□□□ -0.14
CSGALNACT1-205ENST00000517651 SUPT5HO00267 1087 aaKnown RBP14.16□□□□□ -0.14
CSGALNACT1-205ENST00000517651 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
CSGALNACT1-205ENST00000517651 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
CSGALNACT1-205ENST00000517651 FANCD2Q9BXW9 1451 aa14.14□□□□□ -0.15
CSGALNACT1-205ENST00000517651 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
CSGALNACT1-205ENST00000517651 CEP164Q9UPV0 1460 aa14.11□□□□□ -0.15
CSGALNACT1-205ENST00000517651 WDR62O43379 1518 aa14.03□□□□□ -0.16
CSGALNACT1-205ENST00000517651 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
CSGALNACT1-205ENST00000517651 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
CSGALNACT1-205ENST00000517651 PRDM2Q13029 1718 aa13.89□□□□□ -0.19
CSGALNACT1-205ENST00000517651 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
CSGALNACT1-205ENST00000517651 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
CSGALNACT1-205ENST00000517651 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
CSGALNACT1-205ENST00000517651 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
CSGALNACT1-205ENST00000517651 ZNF608Q9ULD9 1512 aaPredicted RBP13.81□□□□□ -0.2
CSGALNACT1-205ENST00000517651 POLA1P09884 1462 aaPredicted RBP13.77□□□□□ -0.21
CSGALNACT1-205ENST00000517651 RAD54L2Q9Y4B4 1467 aa13.76□□□□□ -0.21
CSGALNACT1-205ENST00000517651 CUX1P39880 1505 aa13.75□□□□□ -0.21
CSGALNACT1-205ENST00000517651 SOGA1O94964 1423 aa13.75□□□□□ -0.21
CSGALNACT1-205ENST00000517651 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
CSGALNACT1-205ENST00000517651 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
CSGALNACT1-205ENST00000517651 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
CSGALNACT1-205ENST00000517651 TDRD9Q8NDG6 1382 aaKnown RBP13.72□□□□□ -0.21
CSGALNACT1-205ENST00000517651 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
CSGALNACT1-205ENST00000517651 FBLN2P98095 1184 aa13.67□□□□□ -0.22
CSGALNACT1-205ENST00000517651 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
CSGALNACT1-205ENST00000517651 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
CSGALNACT1-205ENST00000517651 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
CSGALNACT1-205ENST00000517651 SYNJ1O43426 1573 aa13.58□□□□□ -0.24
CSGALNACT1-205ENST00000517651 CHMP7Q8WUX9 453 aaPredicted RBP13.57□□□□□ -0.24
CSGALNACT1-205ENST00000517651 GRIN2BQ13224 1484 aa13.56□□□□□ -0.24
CSGALNACT1-205ENST00000517651 GAPVD1Q14C86 1478 aa13.56□□□□□ -0.24
CSGALNACT1-205ENST00000517651 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
CSGALNACT1-205ENST00000517651 ABCA10Q8WWZ4 1543 aa13.56□□□□□ -0.24
CSGALNACT1-205ENST00000517651 TOP2BQ02880 1626 aa13.55□□□□□ -0.24
CSGALNACT1-205ENST00000517651 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.25
CSGALNACT1-205ENST00000517651 WDR97A6NE52 1622 aa13.51□□□□□ -0.25
CSGALNACT1-205ENST00000517651 MAGI1Q96QZ7 1491 aaPredicted RBP13.5□□□□□ -0.25
CSGALNACT1-205ENST00000517651 CHD1O14646 1710 aa13.48□□□□□ -0.25
CSGALNACT1-205ENST00000517651 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
CSGALNACT1-205ENST00000517651 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
CSGALNACT1-205ENST00000517651 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
CSGALNACT1-205ENST00000517651 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
CSGALNACT1-205ENST00000517651 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
CSGALNACT1-205ENST00000517651 RIMBP3CA6NJZ7 1639 aa13.42□□□□□ -0.26
CSGALNACT1-205ENST00000517651 RIMBP3BA6NNM3 1639 aa13.42□□□□□ -0.26
CSGALNACT1-205ENST00000517651 RIMBP3Q9UFD9 1639 aa13.42□□□□□ -0.26
CSGALNACT1-205ENST00000517651 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
CSGALNACT1-205ENST00000517651 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
CSGALNACT1-205ENST00000517651 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
CSGALNACT1-205ENST00000517651 IGF1RP08069 1367 aa13.37□□□□□ -0.27
CSGALNACT1-205ENST00000517651 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
CSGALNACT1-205ENST00000517651 KIF27Q86VH2 1401 aa13.37□□□□□ -0.27
CSGALNACT1-205ENST00000517651 ADAMTS12P58397 1594 aa13.37□□□□□ -0.27
CSGALNACT1-205ENST00000517651 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
CSGALNACT1-205ENST00000517651 NUP160Q12769 1436 aa13.32□□□□□ -0.28
CSGALNACT1-205ENST00000517651 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
CSGALNACT1-205ENST00000517651 JPH4Q96JJ6 628 aa13.28□□□□□ -0.28
CSGALNACT1-205ENST00000517651 RUSC2Q8N2Y8 1516 aa13.28□□□□□ -0.28
CSGALNACT1-205ENST00000517651 CARMIL1Q5VZK9 1371 aa13.27□□□□□ -0.29
CSGALNACT1-205ENST00000517651 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
CSGALNACT1-205ENST00000517651 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms