RNA–Protein interactions for RNA: ENST00000517621.5

TSPAN18-202, Transcript of tetraspanin 18, humanhuman

TSL 3

Gene TSPAN18, Length 827 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-202ENST00000517621 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
TSPAN18-202ENST00000517621 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
TSPAN18-202ENST00000517621 ABCC9O60706 1549 aa33.43■■■□□ 2.94
TSPAN18-202ENST00000517621 NACADO15069 1562 aa32.29■■■□□ 2.76
TSPAN18-202ENST00000517621 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
TSPAN18-202ENST00000517621 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
TSPAN18-202ENST00000517621 MYO15BQ96JP2 1530 aa32.17■■■□□ 2.74
TSPAN18-202ENST00000517621 ZCCHC6Q5VYS8 1495 aaKnown RBP32.09■■■□□ 2.73
TSPAN18-202ENST00000517621 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
TSPAN18-202ENST00000517621 UNC13AQ9UPW8 1703 aa31.35■■■□□ 2.61
TSPAN18-202ENST00000517621 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
TSPAN18-202ENST00000517621 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
TSPAN18-202ENST00000517621 SCRIBQ14160 1630 aa31.15■■■□□ 2.58
TSPAN18-202ENST00000517621 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
TSPAN18-202ENST00000517621 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
TSPAN18-202ENST00000517621 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
TSPAN18-202ENST00000517621 CC2D2AQ9P2K1 1620 aa30.25■■■□□ 2.43
TSPAN18-202ENST00000517621 CECR2Q9BXF3 1484 aa30.11■■■□□ 2.41
TSPAN18-202ENST00000517621 BAZ1AQ9NRL2 1556 aaPredicted RBP29.93■■■□□ 2.38
TSPAN18-202ENST00000517621 SMARCA4P51532 1647 aa29.86■■■□□ 2.37
TSPAN18-202ENST00000517621 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
TSPAN18-202ENST00000517621 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
TSPAN18-202ENST00000517621 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
TSPAN18-202ENST00000517621 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
TSPAN18-202ENST00000517621 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.33
TSPAN18-202ENST00000517621 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
TSPAN18-202ENST00000517621 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
TSPAN18-202ENST00000517621 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
TSPAN18-202ENST00000517621 WIZO95785 1651 aa29.28■■■□□ 2.28
TSPAN18-202ENST00000517621 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
TSPAN18-202ENST00000517621 LAMC3Q9Y6N6 1575 aa28.99■■■□□ 2.23
TSPAN18-202ENST00000517621 CADPSQ9ULU8 1353 aa28.94■■■□□ 2.22
TSPAN18-202ENST00000517621 ERCC6Q03468 1493 aa28.92■■■□□ 2.22
TSPAN18-202ENST00000517621 NESP48681 1621 aa28.88■■■□□ 2.21
TSPAN18-202ENST00000517621 PDS5BQ9NTI5 1447 aa28.87■■■□□ 2.21
TSPAN18-202ENST00000517621 CFTRP13569 1480 aa28.74■■■□□ 2.19
TSPAN18-202ENST00000517621 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
TSPAN18-202ENST00000517621 SUPT5HO00267 1087 aaKnown RBP28.67■■■□□ 2.18
TSPAN18-202ENST00000517621 CUX2O14529 1486 aa28.65■■■□□ 2.18
TSPAN18-202ENST00000517621 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
TSPAN18-202ENST00000517621 KIF21AQ7Z4S6 1674 aa28.53■■■□□ 2.16
TSPAN18-202ENST00000517621 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
TSPAN18-202ENST00000517621 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
TSPAN18-202ENST00000517621 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.15
TSPAN18-202ENST00000517621 PRDM2Q13029 1718 aa28.42■■■□□ 2.14
TSPAN18-202ENST00000517621 WDR62O43379 1518 aa28.33■■■□□ 2.13
TSPAN18-202ENST00000517621 ABCC8Q09428 1581 aa28.25■■■□□ 2.11
TSPAN18-202ENST00000517621 URB2Q14146 1524 aaKnown RBP28.18■■■□□ 2.1
TSPAN18-202ENST00000517621 TOPBP1Q92547 1522 aa28.06■■■□□ 2.08
TSPAN18-202ENST00000517621 DNMBPQ6XZF7 1577 aa28.04■■■□□ 2.08
TSPAN18-202ENST00000517621 IFT140Q96RY7 1462 aa27.96■■■□□ 2.07
TSPAN18-202ENST00000517621 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
TSPAN18-202ENST00000517621 CUX1P39880 1505 aa27.81■■■□□ 2.04
TSPAN18-202ENST00000517621 SOGA1O94964 1423 aa27.79■■■□□ 2.04
TSPAN18-202ENST00000517621 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
TSPAN18-202ENST00000517621 FGD5Q6ZNL6 1462 aa27.74■■■□□ 2.03
TSPAN18-202ENST00000517621 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
TSPAN18-202ENST00000517621 TARBP1Q13395 1621 aaKnown RBP27.71■■■□□ 2.03
TSPAN18-202ENST00000517621 ZNF608Q9ULD9 1512 aaPredicted RBP27.68■■■□□ 2.02
TSPAN18-202ENST00000517621 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
TSPAN18-202ENST00000517621 RAD54L2Q9Y4B4 1467 aa27.64■■■□□ 2.02
TSPAN18-202ENST00000517621 TOP2BQ02880 1626 aa27.63■■■□□ 2.01
TSPAN18-202ENST00000517621 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
TSPAN18-202ENST00000517621 AQRO60306 1485 aaKnown RBP eCLIP27.58■■■□□ 2.01
TSPAN18-202ENST00000517621 EIF4G3O43432 1585 aaKnown RBP27.57■■■□□ 2
TSPAN18-202ENST00000517621 TDRD9Q8NDG6 1382 aaKnown RBP27.56■■■□□ 2
TSPAN18-202ENST00000517621 OSCARQ8IYS5 282 aa27.55■■■□□ 2
TSPAN18-202ENST00000517621 ABCA10Q8WWZ4 1543 aa27.54■■■□□ 2
TSPAN18-202ENST00000517621 SYNJ1O43426 1573 aa27.52■■■□□ 2
TSPAN18-202ENST00000517621 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
TSPAN18-202ENST00000517621 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
TSPAN18-202ENST00000517621 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
TSPAN18-202ENST00000517621 FBLN2P98095 1184 aa27.34■■□□□ 1.97
TSPAN18-202ENST00000517621 CHMP7Q8WUX9 453 aaPredicted RBP27.34■■□□□ 1.97
TSPAN18-202ENST00000517621 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
TSPAN18-202ENST00000517621 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
TSPAN18-202ENST00000517621 SYNJ2O15056 1496 aa27.26■■□□□ 1.95
TSPAN18-202ENST00000517621 PBRM1Q86U86 1689 aa27.25■■□□□ 1.95
TSPAN18-202ENST00000517621 ERICH3Q5RHP9 1530 aa27.24■■□□□ 1.95
TSPAN18-202ENST00000517621 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
TSPAN18-202ENST00000517621 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
TSPAN18-202ENST00000517621 CHD1O14646 1710 aa27.19■■□□□ 1.94
TSPAN18-202ENST00000517621 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
TSPAN18-202ENST00000517621 IGF1RP08069 1367 aa27.07■■□□□ 1.92
TSPAN18-202ENST00000517621 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
TSPAN18-202ENST00000517621 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
TSPAN18-202ENST00000517621 CLASP1Q7Z460 1538 aa26.96■■□□□ 1.91
TSPAN18-202ENST00000517621 CUL7Q14999 1698 aa26.96■■□□□ 1.91
TSPAN18-202ENST00000517621 NUP160Q12769 1436 aa26.95■■□□□ 1.9
TSPAN18-202ENST00000517621 CARMIL1Q5VZK9 1371 aa26.93■■□□□ 1.9
TSPAN18-202ENST00000517621 ARHGEF11O15085 1522 aa26.91■■□□□ 1.9
TSPAN18-202ENST00000517621 RIMBP3CA6NJZ7 1639 aa26.87■■□□□ 1.89
TSPAN18-202ENST00000517621 RIMBP3BA6NNM3 1639 aa26.87■■□□□ 1.89
TSPAN18-202ENST00000517621 RIMBP3Q9UFD9 1639 aa26.87■■□□□ 1.89
TSPAN18-202ENST00000517621 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
TSPAN18-202ENST00000517621 EEA1Q15075 1411 aa26.78■■□□□ 1.88
TSPAN18-202ENST00000517621 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
TSPAN18-202ENST00000517621 JPH4Q96JJ6 628 aa26.77■■□□□ 1.88
TSPAN18-202ENST00000517621 CYB5RLQ6IPT4 315 aa26.76■■□□□ 1.87
TSPAN18-202ENST00000517621 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms