RNA–Protein interactions for RNA: ENST00000517532.5

NSMCE2-203, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 5

Gene NSMCE2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-203ENST00000517532 AEBP2Q6ZN18 517 aaPredicted RBP25.45■■□□□ 1.66
NSMCE2-203ENST00000517532 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
NSMCE2-203ENST00000517532 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
NSMCE2-203ENST00000517532 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
NSMCE2-203ENST00000517532 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
NSMCE2-203ENST00000517532 ABCC9O60706 1549 aa21.4■■□□□ 1.02
NSMCE2-203ENST00000517532 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
NSMCE2-203ENST00000517532 RB1CC1Q8TDY2 1594 aa20.31■□□□□ 0.84
NSMCE2-203ENST00000517532 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
NSMCE2-203ENST00000517532 NACADO15069 1562 aa20.18■□□□□ 0.82
NSMCE2-203ENST00000517532 DCAF8L2P0C7V8 631 aa20.18■□□□□ 0.82
NSMCE2-203ENST00000517532 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
NSMCE2-203ENST00000517532 FOXD1Q16676 465 aa20.04■□□□□ 0.8
NSMCE2-203ENST00000517532 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
NSMCE2-203ENST00000517532 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
NSMCE2-203ENST00000517532 BICRAQ9NZM4 1560 aa19.7■□□□□ 0.74
NSMCE2-203ENST00000517532 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
NSMCE2-203ENST00000517532 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
NSMCE2-203ENST00000517532 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
NSMCE2-203ENST00000517532 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
NSMCE2-203ENST00000517532 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
NSMCE2-203ENST00000517532 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
NSMCE2-203ENST00000517532 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
NSMCE2-203ENST00000517532 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
NSMCE2-203ENST00000517532 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
NSMCE2-203ENST00000517532 ADRA2BP18089 450 aa19.24■□□□□ 0.67
NSMCE2-203ENST00000517532 PIAS4Q8N2W9 510 aaPredicted RBP18.91■□□□□ 0.62
NSMCE2-203ENST00000517532 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.59
NSMCE2-203ENST00000517532 NCAPD3P42695 1498 aa18.7■□□□□ 0.58
NSMCE2-203ENST00000517532 ATAD2BQ9ULI0 1458 aa18.58■□□□□ 0.57
NSMCE2-203ENST00000517532 MSH5O43196 834 aa18.52■□□□□ 0.56
NSMCE2-203ENST00000517532 CUX2O14529 1486 aa18.51■□□□□ 0.55
NSMCE2-203ENST00000517532 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
NSMCE2-203ENST00000517532 ERCC6Q03468 1493 aa18.5■□□□□ 0.55
NSMCE2-203ENST00000517532 HMGXB3Q12766 1538 aa18.46■□□□□ 0.55
NSMCE2-203ENST00000517532 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
NSMCE2-203ENST00000517532 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
NSMCE2-203ENST00000517532 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
NSMCE2-203ENST00000517532 NESP48681 1621 aa18.34■□□□□ 0.53
NSMCE2-203ENST00000517532 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
NSMCE2-203ENST00000517532 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
NSMCE2-203ENST00000517532 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
NSMCE2-203ENST00000517532 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
NSMCE2-203ENST00000517532 CADPSQ9ULU8 1353 aa18.14■□□□□ 0.49
NSMCE2-203ENST00000517532 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
NSMCE2-203ENST00000517532 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
NSMCE2-203ENST00000517532 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
NSMCE2-203ENST00000517532 WIZO95785 1651 aa17.96■□□□□ 0.47
NSMCE2-203ENST00000517532 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
NSMCE2-203ENST00000517532 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
NSMCE2-203ENST00000517532 WDR62O43379 1518 aa17.9■□□□□ 0.46
NSMCE2-203ENST00000517532 CFTRP13569 1480 aa17.88■□□□□ 0.45
NSMCE2-203ENST00000517532 CEP164Q9UPV0 1460 aa17.88■□□□□ 0.45
NSMCE2-203ENST00000517532 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
NSMCE2-203ENST00000517532 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
NSMCE2-203ENST00000517532 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
NSMCE2-203ENST00000517532 PPP4R3CPQ6ZMV5 832 aa17.76■□□□□ 0.43
NSMCE2-203ENST00000517532 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
NSMCE2-203ENST00000517532 URB2Q14146 1524 aaKnown RBP17.7■□□□□ 0.42
NSMCE2-203ENST00000517532 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
NSMCE2-203ENST00000517532 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
NSMCE2-203ENST00000517532 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
NSMCE2-203ENST00000517532 ABCC8Q09428 1581 aa17.52■□□□□ 0.39
NSMCE2-203ENST00000517532 ZNF608Q9ULD9 1512 aaPredicted RBP17.51■□□□□ 0.39
NSMCE2-203ENST00000517532 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
NSMCE2-203ENST00000517532 MAPK8IP2Q13387 824 aaPredicted RBP17.47■□□□□ 0.39
NSMCE2-203ENST00000517532 PRDM2Q13029 1718 aa17.44■□□□□ 0.38
NSMCE2-203ENST00000517532 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
NSMCE2-203ENST00000517532 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.37
NSMCE2-203ENST00000517532 RIMBP3CA6NJZ7 1639 aa17.34■□□□□ 0.37
NSMCE2-203ENST00000517532 RIMBP3BA6NNM3 1639 aa17.34■□□□□ 0.37
NSMCE2-203ENST00000517532 RIMBP3Q9UFD9 1639 aa17.34■□□□□ 0.37
NSMCE2-203ENST00000517532 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
NSMCE2-203ENST00000517532 FBLN2P98095 1184 aa17.33■□□□□ 0.36
NSMCE2-203ENST00000517532 CYB5RLQ6IPT4 315 aa17.33■□□□□ 0.36
NSMCE2-203ENST00000517532 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
NSMCE2-203ENST00000517532 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
NSMCE2-203ENST00000517532 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
NSMCE2-203ENST00000517532 SOGA1O94964 1423 aa17.3■□□□□ 0.36
NSMCE2-203ENST00000517532 KCNA4P22459 653 aa17.29■□□□□ 0.36
NSMCE2-203ENST00000517532 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
NSMCE2-203ENST00000517532 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
NSMCE2-203ENST00000517532 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
NSMCE2-203ENST00000517532 CNKSR2Q8WXI2 1034 aa17.27■□□□□ 0.36
NSMCE2-203ENST00000517532 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
NSMCE2-203ENST00000517532 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
NSMCE2-203ENST00000517532 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
NSMCE2-203ENST00000517532 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
NSMCE2-203ENST00000517532 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
NSMCE2-203ENST00000517532 CHD1O14646 1710 aa17.15■□□□□ 0.34
NSMCE2-203ENST00000517532 CUX1P39880 1505 aa17.15■□□□□ 0.34
NSMCE2-203ENST00000517532 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
NSMCE2-203ENST00000517532 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
NSMCE2-203ENST00000517532 GRIN2BQ13224 1484 aa17.13■□□□□ 0.33
NSMCE2-203ENST00000517532 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
NSMCE2-203ENST00000517532 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
NSMCE2-203ENST00000517532 SYNJ2O15056 1496 aa17.08■□□□□ 0.32
NSMCE2-203ENST00000517532 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
NSMCE2-203ENST00000517532 GAPVD1Q14C86 1478 aa17.05■□□□□ 0.32
NSMCE2-203ENST00000517532 SYNJ1O43426 1573 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms