RNA–Protein interactions for RNA: ENST00000517460.2

IGHV3-30-2-201, Transcript of immunoglobulin heavy variable 3-30-2 (pseudogene), humanhuman

BASIC

Gene IGHV3-30-2, Length 355 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-2-201ENST00000517460 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
IGHV3-30-2-201ENST00000517460 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
IGHV3-30-2-201ENST00000517460 CCDC180Q9P1Z9 1646 aa22.77■■□□□ 1.24
IGHV3-30-2-201ENST00000517460 CHIC1Q5VXU3 224 aa22.49■■□□□ 1.19
IGHV3-30-2-201ENST00000517460 ABCC9O60706 1549 aa21.96■■□□□ 1.11
IGHV3-30-2-201ENST00000517460 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
IGHV3-30-2-201ENST00000517460 NACADO15069 1562 aa21.36■■□□□ 1.01
IGHV3-30-2-201ENST00000517460 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
IGHV3-30-2-201ENST00000517460 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
IGHV3-30-2-201ENST00000517460 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
IGHV3-30-2-201ENST00000517460 DCAF1Q9Y4B6 1507 aa21.31■■□□□ 1
IGHV3-30-2-201ENST00000517460 UNC13AQ9UPW8 1703 aa20.71■□□□□ 0.91
IGHV3-30-2-201ENST00000517460 SCRIBQ14160 1630 aa20.71■□□□□ 0.91
IGHV3-30-2-201ENST00000517460 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
IGHV3-30-2-201ENST00000517460 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
IGHV3-30-2-201ENST00000517460 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
IGHV3-30-2-201ENST00000517460 EIF4G1Q04637 1599 aaKnown RBP20.04■□□□□ 0.8
IGHV3-30-2-201ENST00000517460 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
IGHV3-30-2-201ENST00000517460 BAZ1AQ9NRL2 1556 aaPredicted RBP19.92■□□□□ 0.78
IGHV3-30-2-201ENST00000517460 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
IGHV3-30-2-201ENST00000517460 CC2D2AQ9P2K1 1620 aa19.88■□□□□ 0.77
IGHV3-30-2-201ENST00000517460 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
IGHV3-30-2-201ENST00000517460 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
IGHV3-30-2-201ENST00000517460 SMARCA2P51531 1590 aa19.75■□□□□ 0.75
IGHV3-30-2-201ENST00000517460 MROH2BQ7Z745 1585 aa19.74■□□□□ 0.75
IGHV3-30-2-201ENST00000517460 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
IGHV3-30-2-201ENST00000517460 ATAD2BQ9ULI0 1458 aa19.69■□□□□ 0.74
IGHV3-30-2-201ENST00000517460 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
IGHV3-30-2-201ENST00000517460 NCAPD3P42695 1498 aa19.68■□□□□ 0.74
IGHV3-30-2-201ENST00000517460 RSF1Q96T23 1441 aaPredicted RBP19.63■□□□□ 0.73
IGHV3-30-2-201ENST00000517460 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
IGHV3-30-2-201ENST00000517460 BAZ1BQ9UIG0 1483 aaKnown RBP19.58■□□□□ 0.72
IGHV3-30-2-201ENST00000517460 WIZO95785 1651 aa19.52■□□□□ 0.71
IGHV3-30-2-201ENST00000517460 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
IGHV3-30-2-201ENST00000517460 SUPT5HO00267 1087 aaKnown RBP19.3■□□□□ 0.68
IGHV3-30-2-201ENST00000517460 CCDC88BA6NC98 1476 aa19.14■□□□□ 0.65
IGHV3-30-2-201ENST00000517460 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
IGHV3-30-2-201ENST00000517460 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
IGHV3-30-2-201ENST00000517460 CFTRP13569 1480 aa19.04■□□□□ 0.64
IGHV3-30-2-201ENST00000517460 PDS5BQ9NTI5 1447 aa19.03■□□□□ 0.64
IGHV3-30-2-201ENST00000517460 NESP48681 1621 aa19.03■□□□□ 0.64
IGHV3-30-2-201ENST00000517460 ERCC6Q03468 1493 aa18.99■□□□□ 0.63
IGHV3-30-2-201ENST00000517460 PRDM2Q13029 1718 aa18.93■□□□□ 0.62
IGHV3-30-2-201ENST00000517460 FANCD2Q9BXW9 1451 aa18.89■□□□□ 0.61
IGHV3-30-2-201ENST00000517460 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
IGHV3-30-2-201ENST00000517460 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
IGHV3-30-2-201ENST00000517460 MRC2Q9UBG0 1479 aa18.78■□□□□ 0.6
IGHV3-30-2-201ENST00000517460 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
IGHV3-30-2-201ENST00000517460 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
IGHV3-30-2-201ENST00000517460 CUX2O14529 1486 aa18.72■□□□□ 0.59
IGHV3-30-2-201ENST00000517460 WDR62O43379 1518 aa18.69■□□□□ 0.58
IGHV3-30-2-201ENST00000517460 URB2Q14146 1524 aaKnown RBP18.64■□□□□ 0.57
IGHV3-30-2-201ENST00000517460 DNMBPQ6XZF7 1577 aa18.63■□□□□ 0.57
IGHV3-30-2-201ENST00000517460 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
IGHV3-30-2-201ENST00000517460 FOXD1Q16676 465 aa18.54■□□□□ 0.56
IGHV3-30-2-201ENST00000517460 WRNQ14191 1432 aaPredicted RBP eCLIP18.54■□□□□ 0.56
IGHV3-30-2-201ENST00000517460 CUX1P39880 1505 aa18.51■□□□□ 0.55
IGHV3-30-2-201ENST00000517460 IFT140Q96RY7 1462 aa18.48■□□□□ 0.55
IGHV3-30-2-201ENST00000517460 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
IGHV3-30-2-201ENST00000517460 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
IGHV3-30-2-201ENST00000517460 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
IGHV3-30-2-201ENST00000517460 FGD5Q6ZNL6 1462 aa18.44■□□□□ 0.54
IGHV3-30-2-201ENST00000517460 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
IGHV3-30-2-201ENST00000517460 SOGA1O94964 1423 aa18.4■□□□□ 0.54
IGHV3-30-2-201ENST00000517460 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
IGHV3-30-2-201ENST00000517460 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
IGHV3-30-2-201ENST00000517460 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
IGHV3-30-2-201ENST00000517460 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
IGHV3-30-2-201ENST00000517460 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
IGHV3-30-2-201ENST00000517460 ZNF608Q9ULD9 1512 aaPredicted RBP18.26■□□□□ 0.51
IGHV3-30-2-201ENST00000517460 EIF4G3O43432 1585 aaKnown RBP18.24■□□□□ 0.51
IGHV3-30-2-201ENST00000517460 TDRD9Q8NDG6 1382 aaKnown RBP18.23■□□□□ 0.51
IGHV3-30-2-201ENST00000517460 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.51
IGHV3-30-2-201ENST00000517460 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
IGHV3-30-2-201ENST00000517460 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
IGHV3-30-2-201ENST00000517460 KIF27Q86VH2 1401 aa18.18■□□□□ 0.5
IGHV3-30-2-201ENST00000517460 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
IGHV3-30-2-201ENST00000517460 MAGI1Q96QZ7 1491 aaPredicted RBP18.14■□□□□ 0.49
IGHV3-30-2-201ENST00000517460 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
IGHV3-30-2-201ENST00000517460 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
IGHV3-30-2-201ENST00000517460 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
IGHV3-30-2-201ENST00000517460 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
IGHV3-30-2-201ENST00000517460 EEA1Q15075 1411 aa18.04■□□□□ 0.48
IGHV3-30-2-201ENST00000517460 SYNJ2O15056 1496 aa18.03■□□□□ 0.48
IGHV3-30-2-201ENST00000517460 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
IGHV3-30-2-201ENST00000517460 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
IGHV3-30-2-201ENST00000517460 IGF1RP08069 1367 aa18.01■□□□□ 0.47
IGHV3-30-2-201ENST00000517460 CUL7Q14999 1698 aa18■□□□□ 0.47
IGHV3-30-2-201ENST00000517460 FBLN2P98095 1184 aa18■□□□□ 0.47
IGHV3-30-2-201ENST00000517460 ADAMTS12P58397 1594 aa18■□□□□ 0.47
IGHV3-30-2-201ENST00000517460 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
IGHV3-30-2-201ENST00000517460 CHD1O14646 1710 aa17.95■□□□□ 0.46
IGHV3-30-2-201ENST00000517460 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
IGHV3-30-2-201ENST00000517460 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
IGHV3-30-2-201ENST00000517460 RUSC2Q8N2Y8 1516 aa17.92■□□□□ 0.46
IGHV3-30-2-201ENST00000517460 CSRNP3Q8WYN3 585 aa17.9■□□□□ 0.46
IGHV3-30-2-201ENST00000517460 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
IGHV3-30-2-201ENST00000517460 NUP160Q12769 1436 aa17.84■□□□□ 0.45
IGHV3-30-2-201ENST00000517460 PRXQ9BXM0 1461 aa17.83■□□□□ 0.45
IGHV3-30-2-201ENST00000517460 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms