RNA–Protein interactions for RNA: ENST00000517406.1

COPS5-202, Transcript of COP9 signalosome subunit 5, humanhuman

TSL 2

Gene COPS5, Length 474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS5-202ENST00000517406 NISCHQ9Y2I1 1504 aa31.29■■■□□ 2.6
COPS5-202ENST00000517406 ABCC9O60706 1549 aa28.73■■■□□ 2.19
COPS5-202ENST00000517406 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
COPS5-202ENST00000517406 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
COPS5-202ENST00000517406 RB1CC1Q8TDY2 1594 aa27.03■■□□□ 1.92
COPS5-202ENST00000517406 NACADO15069 1562 aa26.79■■□□□ 1.88
COPS5-202ENST00000517406 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
COPS5-202ENST00000517406 DCAF8L2P0C7V8 631 aa26.6■■□□□ 1.85
COPS5-202ENST00000517406 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
COPS5-202ENST00000517406 UNC13AQ9UPW8 1703 aa26.39■■□□□ 1.81
COPS5-202ENST00000517406 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
COPS5-202ENST00000517406 CECR2Q9BXF3 1484 aa25.93■■□□□ 1.74
COPS5-202ENST00000517406 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
COPS5-202ENST00000517406 SHROOM4Q9ULL8 1493 aa25.89■■□□□ 1.73
COPS5-202ENST00000517406 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
COPS5-202ENST00000517406 ZCCHC6Q5VYS8 1495 aaKnown RBP25.8■■□□□ 1.72
COPS5-202ENST00000517406 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
COPS5-202ENST00000517406 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
COPS5-202ENST00000517406 SCRIBQ14160 1630 aa25.62■■□□□ 1.69
COPS5-202ENST00000517406 CUX2O14529 1486 aa24.92■■□□□ 1.58
COPS5-202ENST00000517406 NCAPD3P42695 1498 aa24.87■■□□□ 1.57
COPS5-202ENST00000517406 ERCC6Q03468 1493 aa24.72■■□□□ 1.55
COPS5-202ENST00000517406 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
COPS5-202ENST00000517406 NESP48681 1621 aa24.6■■□□□ 1.53
COPS5-202ENST00000517406 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
COPS5-202ENST00000517406 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
COPS5-202ENST00000517406 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
COPS5-202ENST00000517406 THOC2Q8NI27 1593 aaKnown RBP24.33■■□□□ 1.49
COPS5-202ENST00000517406 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
COPS5-202ENST00000517406 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
COPS5-202ENST00000517406 BAZ1AQ9NRL2 1556 aaPredicted RBP24.23■■□□□ 1.47
COPS5-202ENST00000517406 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
COPS5-202ENST00000517406 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
COPS5-202ENST00000517406 PDS5BQ9NTI5 1447 aa24.15■■□□□ 1.46
COPS5-202ENST00000517406 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
COPS5-202ENST00000517406 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.45
COPS5-202ENST00000517406 CADPSQ9ULU8 1353 aa24.07■■□□□ 1.44
COPS5-202ENST00000517406 MRC2Q9UBG0 1479 aa23.95■■□□□ 1.42
COPS5-202ENST00000517406 WDR62O43379 1518 aa23.92■■□□□ 1.42
COPS5-202ENST00000517406 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
COPS5-202ENST00000517406 WIZO95785 1651 aa23.73■■□□□ 1.39
COPS5-202ENST00000517406 FANCD2Q9BXW9 1451 aa23.72■■□□□ 1.39
COPS5-202ENST00000517406 CEP164Q9UPV0 1460 aa23.72■■□□□ 1.39
COPS5-202ENST00000517406 CFTRP13569 1480 aa23.68■■□□□ 1.38
COPS5-202ENST00000517406 URB2Q14146 1524 aaKnown RBP23.6■■□□□ 1.37
COPS5-202ENST00000517406 RSF1Q96T23 1441 aaPredicted RBP23.5■■□□□ 1.35
COPS5-202ENST00000517406 RIMBP3CA6NJZ7 1639 aa23.42■■□□□ 1.34
COPS5-202ENST00000517406 RIMBP3BA6NNM3 1639 aa23.42■■□□□ 1.34
COPS5-202ENST00000517406 RIMBP3Q9UFD9 1639 aa23.42■■□□□ 1.34
COPS5-202ENST00000517406 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
COPS5-202ENST00000517406 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
COPS5-202ENST00000517406 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
COPS5-202ENST00000517406 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
COPS5-202ENST00000517406 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
COPS5-202ENST00000517406 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
COPS5-202ENST00000517406 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
COPS5-202ENST00000517406 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.291e-6■□□□□ 10.6
COPS5-202ENST00000517406 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
COPS5-202ENST00000517406 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
COPS5-202ENST00000517406 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
COPS5-202ENST00000517406 ABCC8Q09428 1581 aa23.09■■□□□ 1.29
COPS5-202ENST00000517406 TRHP20396 242 aaPredicted RBP23.07■■□□□ 1.28
COPS5-202ENST00000517406 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
COPS5-202ENST00000517406 DNMBPQ6XZF7 1577 aa23.03■■□□□ 1.28
COPS5-202ENST00000517406 FBLN2P98095 1184 aa23■■□□□ 1.27
COPS5-202ENST00000517406 CHD1O14646 1710 aa22.97■■□□□ 1.27
COPS5-202ENST00000517406 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
COPS5-202ENST00000517406 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
COPS5-202ENST00000517406 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
COPS5-202ENST00000517406 SOGA1O94964 1423 aa22.88■■□□□ 1.25
COPS5-202ENST00000517406 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.25
COPS5-202ENST00000517406 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
COPS5-202ENST00000517406 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
COPS5-202ENST00000517406 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
COPS5-202ENST00000517406 MAGI1Q96QZ7 1491 aaPredicted RBP22.7■■□□□ 1.22
COPS5-202ENST00000517406 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
COPS5-202ENST00000517406 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
COPS5-202ENST00000517406 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
COPS5-202ENST00000517406 CUX1P39880 1505 aa22.67■■□□□ 1.22
COPS5-202ENST00000517406 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
COPS5-202ENST00000517406 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
COPS5-202ENST00000517406 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
COPS5-202ENST00000517406 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
COPS5-202ENST00000517406 ABCA10Q8WWZ4 1543 aa22.47■■□□□ 1.19
COPS5-202ENST00000517406 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
COPS5-202ENST00000517406 NUP160Q12769 1436 aa22.4■■□□□ 1.18
COPS5-202ENST00000517406 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
COPS5-202ENST00000517406 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
COPS5-202ENST00000517406 CEP170Q5SW79 1584 aa22.35■■□□□ 1.17
COPS5-202ENST00000517406 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
COPS5-202ENST00000517406 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
COPS5-202ENST00000517406 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
COPS5-202ENST00000517406 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
COPS5-202ENST00000517406 JPH4Q96JJ6 628 aa22.22■■□□□ 1.15
COPS5-202ENST00000517406 PRG4Q92954 1404 aaPredicted RBP22.19■■□□□ 1.14
COPS5-202ENST00000517406 KIF13AQ9H1H9 1805 aa22.17■■□□□ 1.14
COPS5-202ENST00000517406 FAM69CQ0P6D2 419 aa22.14■■□□□ 1.13
COPS5-202ENST00000517406 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
COPS5-202ENST00000517406 ABCC10Q5T3U5 1492 aa22.13■■□□□ 1.13
COPS5-202ENST00000517406 KDM4FA0A1W2PPD8 638 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms