RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 NISCHQ9Y2I1 1504 aa12.66□□□□□ -0.38
SCARNA16.4-201ENST00000516956 CCDC180Q9P1Z9 1646 aa11.18□□□□□ -0.62
SCARNA16.4-201ENST00000516956 ABCC9O60706 1549 aa10.86□□□□□ -0.67
SCARNA16.4-201ENST00000516956 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
SCARNA16.4-201ENST00000516956 ZCCHC6Q5VYS8 1495 aaKnown RBP10.55□□□□□ -0.72
SCARNA16.4-201ENST00000516956 NACADO15069 1562 aa10.51□□□□□ -0.73
SCARNA16.4-201ENST00000516956 RB1CC1Q8TDY2 1594 aa10.51□□□□□ -0.73
SCARNA16.4-201ENST00000516956 DCAF1Q9Y4B6 1507 aa10.46□□□□□ -0.74
SCARNA16.4-201ENST00000516956 MYO15BQ96JP2 1530 aa10.45□□□□□ -0.74
SCARNA16.4-201ENST00000516956 SCRIBQ14160 1630 aa10.25□□□□□ -0.77
SCARNA16.4-201ENST00000516956 PABPN1Q86U42 306 aaKnown RBP eCLIP10.2□□□□□ -0.78
SCARNA16.4-201ENST00000516956 SHROOM4Q9ULL8 1493 aa10.18□□□□□ -0.78
SCARNA16.4-201ENST00000516956 UNC13AQ9UPW8 1703 aa10.14□□□□□ -0.79
SCARNA16.4-201ENST00000516956 BICRAQ9NZM4 1560 aa10.08□□□□□ -0.8
SCARNA16.4-201ENST00000516956 EIF4G1Q04637 1599 aaKnown RBP9.86□□□□□ -0.83
SCARNA16.4-201ENST00000516956 BAZ1AQ9NRL2 1556 aaPredicted RBP9.84□□□□□ -0.83
SCARNA16.4-201ENST00000516956 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
SCARNA16.4-201ENST00000516956 SMARCA4P51532 1647 aa9.78□□□□□ -0.84
SCARNA16.4-201ENST00000516956 CC2D2AQ9P2K1 1620 aa9.78□□□□□ -0.84
SCARNA16.4-201ENST00000516956 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
SCARNA16.4-201ENST00000516956 MROH2BQ7Z745 1585 aa9.75□□□□□ -0.85
SCARNA16.4-201ENST00000516956 SMARCA2P51531 1590 aa9.74□□□□□ -0.85
SCARNA16.4-201ENST00000516956 SUPT5HO00267 1087 aaKnown RBP9.71□□□□□ -0.86
SCARNA16.4-201ENST00000516956 ATAD2BQ9ULI0 1458 aa9.71□□□□□ -0.86
SCARNA16.4-201ENST00000516956 RSF1Q96T23 1441 aaPredicted RBP9.7□□□□□ -0.86
SCARNA16.4-201ENST00000516956 BAZ1BQ9UIG0 1483 aaKnown RBP9.69□□□□□ -0.86
SCARNA16.4-201ENST00000516956 NCAPD3P42695 1498 aa9.67□□□□□ -0.86
SCARNA16.4-201ENST00000516956 WIZO95785 1651 aa9.65□□□□□ -0.86
SCARNA16.4-201ENST00000516956 PEG3Q9GZU2 1588 aa9.65□□□□□ -0.86
SCARNA16.4-201ENST00000516956 HMGXB3Q12766 1538 aa9.64□□□□□ -0.87
SCARNA16.4-201ENST00000516956 TOP2AP11388 1531 aaKnown RBP9.58□□□□□ -0.88
SCARNA16.4-201ENST00000516956 CCDC88BA6NC98 1476 aa9.47□□□□□ -0.89
SCARNA16.4-201ENST00000516956 CADPSQ9ULU8 1353 aa9.45□□□□□ -0.9
SCARNA16.4-201ENST00000516956 LAMC3Q9Y6N6 1575 aa9.42□□□□□ -0.9
SCARNA16.4-201ENST00000516956 ERCC6Q03468 1493 aa9.42□□□□□ -0.9
SCARNA16.4-201ENST00000516956 PDS5BQ9NTI5 1447 aa9.41□□□□□ -0.9
SCARNA16.4-201ENST00000516956 NESP48681 1621 aa9.39□□□□□ -0.91
SCARNA16.4-201ENST00000516956 CFTRP13569 1480 aa9.38□□□□□ -0.91
SCARNA16.4-201ENST00000516956 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
SCARNA16.4-201ENST00000516956 CEP164Q9UPV0 1460 aa9.33□□□□□ -0.92
SCARNA16.4-201ENST00000516956 PRDM2Q13029 1718 aa9.28□□□□□ -0.92
SCARNA16.4-201ENST00000516956 KIF21AQ7Z4S6 1674 aa9.27□□□□□ -0.93
SCARNA16.4-201ENST00000516956 MRC2Q9UBG0 1479 aa9.27□□□□□ -0.93
SCARNA16.4-201ENST00000516956 ABCC8Q09428 1581 aa9.24□□□□□ -0.93
SCARNA16.4-201ENST00000516956 WRNQ14191 1432 aaPredicted RBP eCLIP9.2□□□□□ -0.94
SCARNA16.4-201ENST00000516956 CUX2O14529 1486 aa9.2□□□□□ -0.94
SCARNA16.4-201ENST00000516956 DNMBPQ6XZF7 1577 aa9.19□□□□□ -0.94
SCARNA16.4-201ENST00000516956 WDR62O43379 1518 aa9.18□□□□□ -0.94
SCARNA16.4-201ENST00000516956 URB2Q14146 1524 aaKnown RBP9.18□□□□□ -0.94
SCARNA16.4-201ENST00000516956 THOC2Q8NI27 1593 aaKnown RBP9.18□□□□□ -0.94
SCARNA16.4-201ENST00000516956 TRIM41Q8WV44 630 aa9.18□□□□□ -0.94
SCARNA16.4-201ENST00000516956 TOPBP1Q92547 1522 aa9.18□□□□□ -0.94
SCARNA16.4-201ENST00000516956 CUX1P39880 1505 aa9.14□□□□□ -0.95
SCARNA16.4-201ENST00000516956 SOGA1O94964 1423 aa9.13□□□□□ -0.95
SCARNA16.4-201ENST00000516956 FGD5Q6ZNL6 1462 aa9.12□□□□□ -0.95
SCARNA16.4-201ENST00000516956 IFT140Q96RY7 1462 aa9.12□□□□□ -0.95
SCARNA16.4-201ENST00000516956 TOP2BQ02880 1626 aa9.11□□□□□ -0.95
SCARNA16.4-201ENST00000516956 POLA1P09884 1462 aaPredicted RBP9.1□□□□□ -0.95
SCARNA16.4-201ENST00000516956 SYNJ1O43426 1573 aa9.1□□□□□ -0.95
SCARNA16.4-201ENST00000516956 BIVM-ERCC5R4GMW8 1640 aa9.09□□□□□ -0.95
SCARNA16.4-201ENST00000516956 CHIC1Q5VXU3 224 aa9.07□□□□□ -0.96
SCARNA16.4-201ENST00000516956 RAD54L2Q9Y4B4 1467 aa9.07□□□□□ -0.96
SCARNA16.4-201ENST00000516956 TDRD9Q8NDG6 1382 aaKnown RBP9.05□□□□□ -0.96
SCARNA16.4-201ENST00000516956 KIF27Q86VH2 1401 aa9.03□□□□□ -0.96
SCARNA16.4-201ENST00000516956 TARBP1Q13395 1621 aaKnown RBP9.02□□□□□ -0.96
SCARNA16.4-201ENST00000516956 ABCA10Q8WWZ4 1543 aa9.02□□□□□ -0.97
SCARNA16.4-201ENST00000516956 AQRO60306 1485 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCARNA16.4-201ENST00000516956 ZNF608Q9ULD9 1512 aaPredicted RBP9.01□□□□□ -0.97
SCARNA16.4-201ENST00000516956 FBLN2P98095 1184 aa9.01□□□□□ -0.97
SCARNA16.4-201ENST00000516956 GAPVD1Q14C86 1478 aa9.01□□□□□ -0.97
SCARNA16.4-201ENST00000516956 WDR97A6NE52 1622 aa9□□□□□ -0.97
SCARNA16.4-201ENST00000516956 GRIN2BQ13224 1484 aa8.99□□□□□ -0.97
SCARNA16.4-201ENST00000516956 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
SCARNA16.4-201ENST00000516956 FAM9AQ8IZU1 332 aaPredicted RBP8.98□□□□□ -0.97
SCARNA16.4-201ENST00000516956 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
SCARNA16.4-201ENST00000516956 EEA1Q15075 1411 aa8.96□□□□□ -0.98
SCARNA16.4-201ENST00000516956 CSRNP3Q8WYN3 585 aa8.94□□□□□ -0.98
SCARNA16.4-201ENST00000516956 SNAPC4Q5SXM2 1469 aa8.94□□□□□ -0.98
SCARNA16.4-201ENST00000516956 MAGI1Q96QZ7 1491 aaPredicted RBP8.94□□□□□ -0.98
SCARNA16.4-201ENST00000516956 ABCA5Q8WWZ7 1642 aa8.94□□□□□ -0.98
SCARNA16.4-201ENST00000516956 ERICH3Q5RHP9 1530 aa8.93□□□□□ -0.98
SCARNA16.4-201ENST00000516956 PBRM1Q86U86 1689 aa8.93□□□□□ -0.98
SCARNA16.4-201ENST00000516956 OSCARQ8IYS5 282 aa8.92□□□□□ -0.98
SCARNA16.4-201ENST00000516956 FHAD1B1AJZ9 1412 aa8.91□□□□□ -0.98
SCARNA16.4-201ENST00000516956 IGF1RP08069 1367 aa8.91□□□□□ -0.98
SCARNA16.4-201ENST00000516956 SYNJ2O15056 1496 aa8.9□□□□□ -0.98
SCARNA16.4-201ENST00000516956 CARMIL1Q5VZK9 1371 aa8.9□□□□□ -0.98
SCARNA16.4-201ENST00000516956 RUSC2Q8N2Y8 1516 aa8.9□□□□□ -0.99
SCARNA16.4-201ENST00000516956 CUL7Q14999 1698 aa8.89□□□□□ -0.99
SCARNA16.4-201ENST00000516956 EHMT2Q96KQ7 1210 aa8.88□□□□□ -0.99
SCARNA16.4-201ENST00000516956 ADAMTS12P58397 1594 aa8.86□□□□□ -0.99
SCARNA16.4-201ENST00000516956 RAPGEF2Q9Y4G8 1499 aa8.86□□□□□ -0.99
SCARNA16.4-201ENST00000516956 UBTFP17480 764 aaKnown RBP8.86□□□□□ -0.99
SCARNA16.4-201ENST00000516956 GRIN2AQ12879 1464 aa8.85□□□□□ -0.99
SCARNA16.4-201ENST00000516956 CHD1O14646 1710 aa8.84□□□□□ -0.99
SCARNA16.4-201ENST00000516956 PRXQ9BXM0 1461 aa8.81□□□□□ -1
SCARNA16.4-201ENST00000516956 GOLGA3Q08378 1498 aa8.79□□□□□ -1
SCARNA16.4-201ENST00000516956 RANGAP1P46060 587 aaPredicted RBP8.79□□□□□ -1
SCARNA16.4-201ENST00000516956 KIF21BO75037 1637 aa8.78□□□□□ -1
SCARNA16.4-201ENST00000516956 KIAA0586Q9BVV6 1533 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms