RNA–Protein interactions for RNA: ENST00000516907.1

RN7SKP260-201, Transcript of RNA, 7SK small nuclear pseudogene 260, humanhuman

BASIC

Gene RN7SKP260, Length 149 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP260-201ENST00000516907 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
RN7SKP260-201ENST00000516907 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
RN7SKP260-201ENST00000516907 ABCC9O60706 1549 aa10.56□□□□□ -0.72
RN7SKP260-201ENST00000516907 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
RN7SKP260-201ENST00000516907 NACADO15069 1562 aa10.22□□□□□ -0.77
RN7SKP260-201ENST00000516907 DCAF8L2P0C7V8 631 aa10.22□□□□□ -0.77
RN7SKP260-201ENST00000516907 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
RN7SKP260-201ENST00000516907 ZCCHC6Q5VYS8 1495 aaKnown RBP10.13□□□□□ -0.79
RN7SKP260-201ENST00000516907 DCAF1Q9Y4B6 1507 aa10.11□□□□□ -0.79
RN7SKP260-201ENST00000516907 SHROOM4Q9ULL8 1493 aa9.9□□□□□ -0.83
RN7SKP260-201ENST00000516907 PABPN1Q86U42 306 aaKnown RBP eCLIP9.84□□□□□ -0.83
RN7SKP260-201ENST00000516907 SCRIBQ14160 1630 aa9.84□□□□□ -0.83
RN7SKP260-201ENST00000516907 UNC13AQ9UPW8 1703 aa9.79□□□□□ -0.84
RN7SKP260-201ENST00000516907 BICRAQ9NZM4 1560 aa9.77□□□□□ -0.85
RN7SKP260-201ENST00000516907 EIF4G1Q04637 1599 aaKnown RBP9.6□□□□□ -0.87
RN7SKP260-201ENST00000516907 DNAJC5BQ9UF47 199 aa9.54□□□□□ -0.88
RN7SKP260-201ENST00000516907 CECR2Q9BXF3 1484 aa9.53□□□□□ -0.88
RN7SKP260-201ENST00000516907 CC2D2AQ9P2K1 1620 aa9.53□□□□□ -0.88
RN7SKP260-201ENST00000516907 BAZ1AQ9NRL2 1556 aaPredicted RBP9.49□□□□□ -0.89
RN7SKP260-201ENST00000516907 SMARCA2P51531 1590 aa9.45□□□□□ -0.9
RN7SKP260-201ENST00000516907 SMARCA4P51532 1647 aa9.42□□□□□ -0.9
RN7SKP260-201ENST00000516907 NCAPD3P42695 1498 aa9.4□□□□□ -0.9
RN7SKP260-201ENST00000516907 HMGXB3Q12766 1538 aa9.38□□□□□ -0.91
RN7SKP260-201ENST00000516907 ATAD2BQ9ULI0 1458 aa9.38□□□□□ -0.91
RN7SKP260-201ENST00000516907 BAZ1BQ9UIG0 1483 aaKnown RBP9.37□□□□□ -0.91
RN7SKP260-201ENST00000516907 PEG3Q9GZU2 1588 aa9.34□□□□□ -0.91
RN7SKP260-201ENST00000516907 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
RN7SKP260-201ENST00000516907 RSF1Q96T23 1441 aaPredicted RBP9.24□□□□□ -0.93
RN7SKP260-201ENST00000516907 ERCC6Q03468 1493 aa9.21□□□□□ -0.93
RN7SKP260-201ENST00000516907 TOP2AP11388 1531 aaKnown RBP9.2□□□□□ -0.94
RN7SKP260-201ENST00000516907 WIZO95785 1651 aa9.19□□□□□ -0.94
RN7SKP260-201ENST00000516907 LAMC3Q9Y6N6 1575 aa9.18□□□□□ -0.94
RN7SKP260-201ENST00000516907 PDS5BQ9NTI5 1447 aa9.17□□□□□ -0.94
RN7SKP260-201ENST00000516907 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
RN7SKP260-201ENST00000516907 CUX2O14529 1486 aa9.1□□□□□ -0.95
RN7SKP260-201ENST00000516907 NESP48681 1621 aa9.08□□□□□ -0.96
RN7SKP260-201ENST00000516907 CFTRP13569 1480 aa9.07□□□□□ -0.96
RN7SKP260-201ENST00000516907 SUPT5HO00267 1087 aaKnown RBP9.06□□□□□ -0.96
RN7SKP260-201ENST00000516907 CEP164Q9UPV0 1460 aa9.05□□□□□ -0.96
RN7SKP260-201ENST00000516907 CCDC88BA6NC98 1476 aa9.03□□□□□ -0.96
RN7SKP260-201ENST00000516907 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.96
RN7SKP260-201ENST00000516907 MRC2Q9UBG0 1479 aa9.02□□□□□ -0.96
RN7SKP260-201ENST00000516907 ABCC8Q09428 1581 aa8.98□□□□□ -0.97
RN7SKP260-201ENST00000516907 THOC2Q8NI27 1593 aaKnown RBP8.97□□□□□ -0.97
RN7SKP260-201ENST00000516907 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
RN7SKP260-201ENST00000516907 WDR62O43379 1518 aa8.96□□□□□ -0.97
RN7SKP260-201ENST00000516907 PRDM2Q13029 1718 aa8.94□□□□□ -0.98
RN7SKP260-201ENST00000516907 DNMBPQ6XZF7 1577 aa8.88□□□□□ -0.99
RN7SKP260-201ENST00000516907 URB2Q14146 1524 aaKnown RBP8.87□□□□□ -0.99
RN7SKP260-201ENST00000516907 IFT140Q96RY7 1462 aa8.87□□□□□ -0.99
RN7SKP260-201ENST00000516907 TOPBP1Q92547 1522 aa8.85□□□□□ -0.99
RN7SKP260-201ENST00000516907 WDR97A6NE52 1622 aa8.79□□□□□ -1
RN7SKP260-201ENST00000516907 SOGA1O94964 1423 aa8.79□□□□□ -1
RN7SKP260-201ENST00000516907 WRNQ14191 1432 aaPredicted RBP eCLIP8.79□□□□□ -1
RN7SKP260-201ENST00000516907 POLA1P09884 1462 aaPredicted RBP8.78□□□□□ -1
RN7SKP260-201ENST00000516907 FGD5Q6ZNL6 1462 aa8.77□□□□□ -1.01
RN7SKP260-201ENST00000516907 CUX1P39880 1505 aa8.75□□□□□ -1.01
RN7SKP260-201ENST00000516907 DNAJC5Q9H3Z4 198 aa8.74□□□□□ -1.01
RN7SKP260-201ENST00000516907 OSCARQ8IYS5 282 aa8.73□□□□□ -1.01
RN7SKP260-201ENST00000516907 TOP2BQ02880 1626 aa8.72□□□□□ -1.01
RN7SKP260-201ENST00000516907 EIF4G3O43432 1585 aaKnown RBP8.72□□□□□ -1.01
RN7SKP260-201ENST00000516907 TARBP1Q13395 1621 aaKnown RBP8.71□□□□□ -1.02
RN7SKP260-201ENST00000516907 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 ABCA10Q8WWZ4 1543 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 BIVM-ERCC5R4GMW8 1640 aa8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 TDRD9Q8NDG6 1382 aaKnown RBP8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 MAGI1Q96QZ7 1491 aaPredicted RBP8.7□□□□□ -1.02
RN7SKP260-201ENST00000516907 AQRO60306 1485 aaKnown RBP eCLIP8.69□□□□□ -1.02
RN7SKP260-201ENST00000516907 GAPVD1Q14C86 1478 aa8.69□□□□□ -1.02
RN7SKP260-201ENST00000516907 FBLN2P98095 1184 aa8.68□□□□□ -1.02
RN7SKP260-201ENST00000516907 CHMP7Q8WUX9 453 aaPredicted RBP8.68□□□□□ -1.02
RN7SKP260-201ENST00000516907 SYNJ1O43426 1573 aa8.66□□□□□ -1.02
RN7SKP260-201ENST00000516907 SYNJ2O15056 1496 aa8.64□□□□□ -1.03
RN7SKP260-201ENST00000516907 SNAPC4Q5SXM2 1469 aa8.64□□□□□ -1.03
RN7SKP260-201ENST00000516907 KIF27Q86VH2 1401 aa8.64□□□□□ -1.03
RN7SKP260-201ENST00000516907 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
RN7SKP260-201ENST00000516907 ABCA5Q8WWZ7 1642 aa8.62□□□□□ -1.03
RN7SKP260-201ENST00000516907 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
RN7SKP260-201ENST00000516907 FHAD1B1AJZ9 1412 aa8.61□□□□□ -1.03
RN7SKP260-201ENST00000516907 PBRM1Q86U86 1689 aa8.59□□□□□ -1.03
RN7SKP260-201ENST00000516907 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
RN7SKP260-201ENST00000516907 ADAMTS12P58397 1594 aa8.56□□□□□ -1.04
RN7SKP260-201ENST00000516907 CHIC1Q5VXU3 224 aa8.56□□□□□ -1.04
RN7SKP260-201ENST00000516907 CHD1O14646 1710 aa8.55□□□□□ -1.04
RN7SKP260-201ENST00000516907 CUL7Q14999 1698 aa8.55□□□□□ -1.04
RN7SKP260-201ENST00000516907 EEA1Q15075 1411 aa8.53□□□□□ -1.04
RN7SKP260-201ENST00000516907 FAM9AQ8IZU1 332 aaPredicted RBP8.52□□□□□ -1.05
RN7SKP260-201ENST00000516907 IGF1RP08069 1367 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 CARMIL1Q5VZK9 1371 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 ARHGEF11O15085 1522 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 NUP160Q12769 1436 aa8.51□□□□□ -1.05
RN7SKP260-201ENST00000516907 CLASP1Q7Z460 1538 aa8.5□□□□□ -1.05
RN7SKP260-201ENST00000516907 RAPGEF2Q9Y4G8 1499 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 KIAA0586Q9BVV6 1533 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 RIMBP3Q9UFD9 1639 aa8.47□□□□□ -1.05
RN7SKP260-201ENST00000516907 CARMIL2Q6F5E8 1435 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms